Viral OTU vOTU-125722

vOTU: vOTU-125722

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-125722
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00048 → vGENUS-00024 → vOTU-125722
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1360516
Biosample ID	N/A
Length	32,772 bps
CheckV Completeness	55.55% (Medium-quality)
CDS Count	60
CDS Density	90.18%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1360516_4	PF13973	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_8	phrog_1233	48.4	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1360516_8	658655.HMPREF0988_00914	92.0	8.82e-23	N/A	N/A
structural_annotation	UHGV-1360516_8	PF20352,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360516_9	658655.HMPREF0988_00915	88.6	3.45e-19	N/A	N/A
PHROG	UHGV-1360516_10	phrog_374	214.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360516_10	UniRef90_A0A0H3N242	199.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1360516_10	500635.MITSMUL_03105	189.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
COG	UHGV-1360516_10	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
Pfam	UHGV-1360516_11	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-1360516_11	PF19891,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_12	phrog_20016	217.5	0	N/A	unknown function
UniRef90	UHGV-1360516_12	UniRef90_A0A345BPX4	159.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1360516_12	397290.C810_05214	221.0	0	N/A	N/A
structural_annotation	UHGV-1360516_12	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_13	phrog_16490	183.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1360516_13	397290.C810_01328	208.0	0	N/A	N/A
PHROG	UHGV-1360516_15	phrog_21718	45.0	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1360516_15	658655.HMPREF0988_00919	101.0	7.85e-25	N/A	N/A
structural_annotation	UHGV-1360516_15	NF033819	N/A	N/A	N/A	N/A
KOfam	UHGV-1360516_17	K14059	256.2	0	int; integrase	N/A
PHROG	UHGV-1360516_17	phrog_1	210.7	0	integrase	integration and excision
UniRef90	UHGV-1360516_17	UniRef90_A0A412RQS9	763.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1360516_17	1235799.C818_02711	369.0	0	Phage integrase family	N/A
Pfam	UHGV-1360516_17	PF02920	N/A	N/A	DNA binding domain of tn916 integrase	Integrase_DNA
Pfam	UHGV-1360516_17	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1360516_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1360516_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1360516_17	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_18	phrog_16129	59.3	2.1e-17	excisionase	integration and excision
UniRef90	UHGV-1360516_18	UniRef90_A0A412RR26	247.0	0	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_18	1121296.JONJ01000009_gene671	89.4	1.31e-21	Excisionase from transposon Tn916	N/A
Pfam	UHGV-1360516_18	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
Pfam	UHGV-1360516_18	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis
NCBIFam	UHGV-1360516_18	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1360516_18	PF09035,PF00196,MF_00674,NF033787,NF008895,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1360516_20	K00558	42.2	0.0000000000069	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1360516_20	phrog_17284	67.6	9.7e-20	N/A	unknown function
UniRef90	UHGV-1360516_20	UniRef90_A0A412KFA2	461.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1360516_20	411490.ANACAC_02374	85.5	0.00000000000000169	N/A	N/A
PADLOC	UHGV-1360516_20	oMTase_00023	52.7	2.8e-24	orphan methyltransferase	RM
Pfam	UHGV-1360516_20	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1360516_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1360516_21	phrog_8684	54.8	0.0000000000000018	N/A	unknown function
UniRef90	UHGV-1360516_21	UniRef90_A0A3D5WQK7	120.0	4.69e-32	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_21	742733.HMPREF9469_00912	58.5	0.00000000695	YopX protein	N/A
eggNOG-mapper	UHGV-1360516_22	665950.HMPREF1025_02540	51.2	0.00000562	N/A	N/A
COG	UHGV-1360516_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1360516_24	phrog_2118	118.3	7.1e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360516_24	UniRef90_R5ZJF1	203.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1360516_24	610130.Closa_0730	127.0	1.94e-36	HNH endonuclease	N/A
Pfam	UHGV-1360516_24	PF14279	N/A	N/A	HNH endonuclease	HNH_5
COG	UHGV-1360516_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1360516_24	COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360516_25	UniRef90_A0A0F0C7A4	73.9	0.000000000000504	N/A	N/A
eggNOG-mapper	UHGV-1360516_25	397290.C810_01492	64.3	0.00000000018	N/A	N/A
PHROG	UHGV-1360516_26	phrog_22292	53.5	0.0000000000000026	N/A	unknown function
structural_annotation	UHGV-1360516_26	PF21744	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_31	phrog_9804	178.0	0	N/A	unknown function
UniRef90	UHGV-1360516_31	UniRef90_A0A412RQW3	310.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_31	1410650.JHWL01000003_gene2847	142.0	2.61999e-40	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1360516_31	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1360516_31	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_32	phrog_5708	239.5	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360516_32	UniRef90_UPI001BB8B78A	319.0	0	Phage replication initiation protein	N/A
eggNOG-mapper	UHGV-1360516_32	1415774.U728_867	191.0	0	DnaD domain protein	N/A
COG	UHGV-1360516_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-1360516_33	phrog_2245	80.4	2.3e-23	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1360516_33	UniRef90_A0A373NRP8	100.0	1.47e-25	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_33	326426.Bbr_0313	70.5	0.000000000000148	N/A	N/A
structural_annotation	UHGV-1360516_33	PF12643,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_36	phrog_19106	290.2	0	N/A	unknown function
UniRef90	UHGV-1360516_36	UniRef90_R6RVQ6	259.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_36	658655.HMPREF0988_00875	209.0	0	N/A	N/A
structural_annotation	UHGV-1360516_36	TIGR01453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360516_37	PF00041	N/A	N/A	N/A	N/A
KOfam	UHGV-1360516_38	K03111	104.5	1.7e-30	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1360516_38	phrog_44	116.7	2.3e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360516_38	UniRef90_A0A1I4BY22	153.0	2.8026e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1360516_38	397290.C810_01495	152.0	1.4013e-45	Single-strand binding protein family	N/A
Pfam	UHGV-1360516_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1360516_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1360516_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1360516_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1360516_38	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_40	phrog_392	116.3	2.6e-34	metal-dependent hydrolase	other
UniRef90	UHGV-1360516_40	UniRef90_A0A412RQX2	330.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1360516_40	1232453.BAIF02000057_gene1138	107.0	7.99e-27	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-1360516_40	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1360516_40	PF02112,MF_00457,NF041851,COG2220	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_41	phrog_392	53.3	0.0000000000000066	metal-dependent hydrolase	other
UniRef90	UHGV-1360516_41	UniRef90_R7BIJ8	103.0	5e-28	Putative phage-related hydrolase	N/A
eggNOG-mapper	UHGV-1360516_41	1122985.HMPREF1991_02241	81.6	3.21e-18	N/A	N/A
Pfam	UHGV-1360516_41	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-1360516_41	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
PHROG	UHGV-1360516_43	phrog_25456	53.1	6.2e-20	N/A	unknown function
PHROG	UHGV-1360516_44	phrog_10056	180.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360516_44	UniRef90_A0A412RR22	480.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1360516_44	397290.C810_01467	324.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-1360516_44	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1360516_44	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1360516_44	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1360516_44	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_46	phrog_2164	94.0	6.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1360516_46	1174684.EBMC1_14695	53.5	0.00000508	N/A	N/A
KOfam	UHGV-1360516_47	K19171	74.1	1.5e-21	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1360516_47	phrog_77	152.2	4.2039e-45	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360516_47	UniRef90_A0A412RQV0	951.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_47	397290.C810_01461	372.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1360516_47	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1360516_47	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360516_50	UniRef90_UPI0008FDD6D4	97.4	3.21e-21	G5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_50	742765.HMPREF9457_03017	103.0	4.26e-24	peptidase	N/A
COG	UHGV-1360516_50	COG4942	N/A	N/A	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	N/A
PHROG	UHGV-1360516_51	phrog_463	212.6	0	anti-repressor	transcription regulation
UniRef90	UHGV-1360516_51	UniRef90_A0A412RQX1	352.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-1360516_51	1304866.K413DRAFT_1188	162.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1360516_51	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1360516_51	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1360516_51	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1360516_51	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_52	phrog_8	54.5	0.000000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-1360516_52	UniRef90_UPI001C012A29	80.5	1.22e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_52	1304866.K413DRAFT_0834	62.8	0.00000000000663	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-1360516_52	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1360516_52	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1360516_52	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1360516_53	K22300	52.8	0.0000000000000091	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1360516_53	phrog_8	52.3	0.000000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1360516_53	UniRef90_A0A412RR31	118.0	4.79e-32	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_53	1232449.BAHV02000016_gene1846	60.8	0.00000000137	Peptidase S24-like	N/A
Pfam	UHGV-1360516_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1360516_53	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1360516_53	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_54	phrog_3845	47.2	0.00000000000041	N/A	unknown function
eggNOG-mapper	UHGV-1360516_54	1262449.CP6013_3208	48.1	0.00000756	N/A	N/A
eggNOG-mapper	UHGV-1360516_56	476272.RUMHYD_01994	66.6	0.0000000033	N/A	N/A
UniRef90	UHGV-1360516_57	UniRef90_A0A7X5CHF3	50.4	0.000000925	Peptide chain release factor 2	N/A
PHROG	UHGV-1360516_58	phrog_6616	605.9	0	tail protein	tail
UniRef90	UHGV-1360516_58	UniRef90_A0A412RR71	1056.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1360516_58	476272.RUMHYD_01992	452.0	0	N/A	N/A
structural_annotation	UHGV-1360516_58	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_59	phrog_1194	117.9	4.9e-35	N/A	unknown function
eggNOG-mapper	UHGV-1360516_59	86416.Clopa_0588	86.3	2.88e-20	N/A	N/A
Pfam	UHGV-1360516_59	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1360516_59	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1360516_60	phrog_11489	90.7	2.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1360516_60	1232443.BAIA02000078_gene18	70.5	0.00000000083	phage tail tape measure protein	N/A
COG	UHGV-1360516_60	COG1511	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1360516	Yes	32,772	38	56	1