Viral OTU vOTU-125723

vOTU: vOTU-125723

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-125723
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00197 → vGENUS-01289 → vOTU-125723
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_C → Ruminococcus_C sp000433635
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0023509
Biosample ID	SAMEA4766019
Length	23,880 bps
CheckV Completeness	63.08% (Medium-quality)
CDS Count	39
CDS Density	91.95%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0023509_1	phrog_3366	53.2	8.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0023509_1	411473.RUMCAL_01932	79.3	1.23e-17	N/A	N/A
Pfam	UHGV-0023509_1	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0023509_1	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_2	phrog_541	88.1	8.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0023509_2	641112.ACOK01000073_gene2896	87.4	3.3e-20	N/A	N/A
PHROG	UHGV-0023509_3	phrog_422	236.7	0	major head protein	head and packaging
UniRef90	UHGV-0023509_3	UniRef90_A0A345MKD0	298.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0023509_3	641112.ACOK01000073_gene2894	300.0	0	N/A	N/A
structural_annotation	UHGV-0023509_3	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_4	phrog_194	49.7	0.000000000000073	head scaffolding protein	head and packaging
UniRef90	UHGV-0023509_4	UniRef90_A0A174LGM6	65.5	0.000000000646	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0023509_4	641112.ACOK01000073_gene2893	146.0	3.05063e-42	Phage minor structural protein GP20	N/A
structural_annotation	UHGV-0023509_4	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_5	phrog_918	121.6	2.1e-36	N/A	unknown function
UniRef90	UHGV-0023509_5	UniRef90_UPI001D020797	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-0023509_5	357809.Cphy_2966	127.0	2.86e-37	N/A	N/A
Pfam	UHGV-0023509_5	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0023509_5	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_7	phrog_581	302.8	0	minor head protein	head and packaging
UniRef90	UHGV-0023509_7	UniRef90_U2K8C2	493.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0023509_7	411473.RUMCAL_01925	493.0	0	N/A	N/A
Pfam	UHGV-0023509_7	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0023509_7	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023509_7	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_8	phrog_533	289.8	0	portal protein	head and packaging
UniRef90	UHGV-0023509_8	UniRef90_UPI001C1263AE	290.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0023509_8	641112.ACOK01000073_gene2889	291.0	0	N/A	N/A
Pfam	UHGV-0023509_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0023509_8	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0023509_9	K06909	152.4	4.2039e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0023509_9	phrog_2	149.9	2.38221e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0023509_9	UniRef90_A0A315Y4A8	483.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0023509_9	641112.ACOK01000073_gene2888	517.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0023509_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0023509_9	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0023509_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0023509_9	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_10	phrog_2412	53.5	4.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0023509_10	742738.HMPREF9460_02504	63.5	0.0000000000346	N/A	N/A
Pfam	UHGV-0023509_10	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
PHROG	UHGV-0023509_11	phrog_36	75.9	6.4e-22	transcriptional regulator	transcription regulation
Pfam	UHGV-0023509_11	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0023509_11	PF04545,MF_00674,TIGR02980,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_13	phrog_2245	74.2	1.9e-21	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0023509_13	UniRef90_A0A8G1WT09	51.2	0.00000265	MazG domain-containing protein	N/A
structural_annotation	UHGV-0023509_13	PF10400,MF_01019,NF010671,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_18	phrog_24490	112.4	1.4e-33	N/A	unknown function
PHROG	UHGV-0023509_19	phrog_5702	75.1	4e-22	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023509_19	UniRef90_A0A374N329	142.0	4.67053e-42	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0023509_19	1410670.JHXF01000015_gene2271	135.0	6.71001e-40	VRR_NUC	N/A
Pfam	UHGV-0023509_19	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0023509_19	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0023509_20	K19789	294.3	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0023509_20	phrog_16	292.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023509_20	UniRef90_A0A356CZA9	521.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0023509_20	1410670.JHXF01000015_gene2270	512.0	0	helicase	N/A
PADLOC	UHGV-0023509_20	mREase_IV_00005	112.5	4e-34	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0023509_20	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0023509_20	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0023509_20	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0023509_20	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0023509_22	K17680	270.9	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0023509_22	phrog_239	268.5	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023509_22	UniRef90_R6P3P1	466.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0023509_22	476272.RUMHYD_02834	415.0	0	N/A	N/A
Pfam	UHGV-0023509_22	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-0023509_22	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0023509_22	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0023509_22	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_23	phrog_19415	71.4	1.6e-20	N/A	unknown function
UniRef90	UHGV-0023509_23	UniRef90_R7FEB6	80.9	4.03e-16	N/A	N/A
eggNOG-mapper	UHGV-0023509_23	1105031.HMPREF1141_0552	73.2	0.00000000000000988	N/A	N/A
Pfam	UHGV-0023509_23	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0023509_23	PF19808	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023509_24	UniRef90_R7F806	73.6	0.00000000000138	PF05037 family protein	N/A
eggNOG-mapper	UHGV-0023509_24	476272.RUMHYD_01739	83.2	6.35e-17	N/A	N/A
structural_annotation	UHGV-0023509_24	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_25	phrog_2872	209.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023509_25	UniRef90_UPI00058FD242	260.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0023509_25	1345695.CLSA_c30180	258.0	0	AAA domain	N/A
Pfam	UHGV-0023509_25	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0023509_25	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_26	phrog_253	134.5	5.5e-40	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023509_26	UniRef90_UPI0019171ADA	112.0	1.02e-27	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0023509_26	447909.A6M981_9VIRU	84.3	8.22e-18	Siphovirus Gp157	N/A
Pfam	UHGV-0023509_26	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0023509_26	PF05565,NF002139	N/A	N/A	N/A	N/A
KOfam	UHGV-0023509_32	K22299	51.6	0.00000000000002	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0023509_32	phrog_8	68.6	1.3e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0023509_32	UniRef90_B0MKY5	98.6	2.41e-23	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0023509_32	1121085.AUCI01000010_gene502	69.7	0.000000000000267	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0023509_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0023509_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0023509_32	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_33	phrog_8	53.9	0.0000000000000043	transcriptional regulator	transcription regulation
UniRef90	UHGV-0023509_33	UniRef90_W7DL42	65.1	0.0000000000178	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0023509_33	1185653.A1A1_05527	52.8	0.000000257	transcriptional	N/A
PADLOC	UHGV-0023509_33	retron_type_VI_hth_cluster2_1	41.1	0.000000000037	N/A	Retron
Pfam	UHGV-0023509_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0023509_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0023509_33	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023509_34	UniRef90_A0A3C0II80	267.0	0	DZANK-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0023509_34	575594.ACOH01000003_gene833	51.2	0.00000198	zinc-ribbon domain	N/A
Pfam	UHGV-0023509_34	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
PHROG	UHGV-0023509_35	phrog_4402	94.9	7.8e-28	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023509_35	UniRef90_A0A0H5Q879	325.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0023509_35	936596.HMPREF1495_0080	249.0	0	Initiator Replication protein	N/A
Pfam	UHGV-0023509_35	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0023509_35	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0023509_35	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0023509_35	PF01051,PF21205,NF010305,COG5527	N/A	N/A	N/A	N/A
KOfam	UHGV-0023509_36	K07273	189.1	0	acm; lysozyme	N/A
PHROG	UHGV-0023509_36	phrog_291	156.0	0	endolysin	lysis
UniRef90	UHGV-0023509_36	UniRef90_A0A3D5KVU8	753.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0023509_36	1341157.RF007C_02545	460.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0023509_36	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0023509_36	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0023509_36	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023509_36	PF01183,PF08291,NF007557,COG3757,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_37	phrog_199	82.3	5.3e-24	holin	lysis
UniRef90	UHGV-0023509_37	UniRef90_A0A352TKQ2	265.0	0	Holin	N/A
eggNOG-mapper	UHGV-0023509_37	641112.ACOK01000108_gene1813	176.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0023509_37	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0023509_37	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0023509_37	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0023509_37	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023509_38	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0023509_39	phrog_35590	183.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0023509_39	411473.RUMCAL_00613	102.0	7.8e-24	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0023509_39	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0023509	Yes	23,880	47	63	1