Viral OTU vOTU-126325

vOTU: vOTU-126325

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-126325
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00307 → vOTU-126325
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminiclostridium_E → Ruminiclostridium_E siraeum
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0099595
Biosample ID	SAMEA3449301
Length	26,540 bps
CheckV Completeness	72.41% (Medium-quality)
CDS Count	38
CDS Density	88.80%
tRNA Count	4
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 72.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0099595_1	1232453.BAIF02000002_gene1254	54.7	0.00000000456	Belongs to the purine pyrimidine phosphoribosyltransferase family	N/A
COG	UHGV-0099595_1	COG0634	N/A	N/A	Hypoxanthine-guanine phosphoribosyltransferase	N/A
KOfam	UHGV-0099595_2	K05991	63.1	5.4e-22	E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]	N/A
PHROG	UHGV-0099595_2	phrog_18474	150.4	4.2039e-45	hydrolase	other
UniRef90	UHGV-0099595_2	UniRef90_D4JUW7	833.0	0	Cellulase	N/A
eggNOG-mapper	UHGV-0099595_2	1160721.RBI_I00497	720.0	0	Belongs to the glycosyl hydrolase 5 (cellulase A) family	N/A
Pfam	UHGV-0099595_2	PF00150	N/A	N/A	Cellulase (glycosyl hydrolase family 5)	Cellulase
COG	UHGV-0099595_2	COG2730	N/A	N/A	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	N/A
KOfam	UHGV-0099595_3	K14059	186.6	0	int; integrase	N/A
PHROG	UHGV-0099595_3	phrog_1	178.7	0	integrase	integration and excision
UniRef90	UHGV-0099595_3	UniRef90_UPI00164D34B0	144.0	2.93e-36	site-specific integrase	N/A
eggNOG-mapper	UHGV-0099595_3	290402.Cbei_2306	111.0	9.11e-25	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0099595_3	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0099595_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0099595_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0099595_3	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0099595_4	UniRef90_A0A6N4ALK1	127.0	2.77e-37	RHH_1 domain-containing protein	N/A
Pfam	UHGV-0099595_4	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0099595_4	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0099595_7	K07729	56.6	4.8e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0099595_7	phrog_4	117.0	8.4e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0099595_7	UniRef90_A0A6N4ALL5	656.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_7	641112.ACOK01000073_gene2861	165.0	0	Peptidase S24-like	N/A
PADLOC	UHGV-0099595_7	retron_type_VI_hth_cluster2_1	51.4	0.0000000000000045	N/A	Retron
Pfam	UHGV-0099595_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0099595_7	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0099595_7	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0099595_7	PF00717,PF01381,MF_00015,TIGR00498,NF041951,COG1396,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0099595_8	K22300	57.7	3e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0099595_8	phrog_8	60.1	5.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0099595_8	UniRef90_A0A6N4AL49	122.0	2.33e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_8	1230342.CTM_14383	64.3	0.00000000000193	Helix-turn-helix domain	N/A
PADLOC	UHGV-0099595_8	retron_type_VI_hth_cluster2_1	44.8	0.0000000000038	N/A	Retron
Pfam	UHGV-0099595_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0099595_8	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0099595_8	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0099595_10	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_15	phrog_27517	46.6	0.00000000000054	N/A	unknown function
PHROG	UHGV-0099595_16	phrog_38338	84.5	1.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0099595_16	693746.OBV_24020	76.6	2.3e-16	N/A	N/A
PHROG	UHGV-0099595_17	phrog_8470	231.7	0	N/A	unknown function
UniRef90	UHGV-0099595_17	UniRef90_A0A315Y141	174.0	1.4013e-44	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0099595_17	641112.ACOK01000073_gene2870	184.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0099595_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0099595_17	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_18	phrog_15609	99.1	4.6e-29	N/A	unknown function
UniRef90	UHGV-0099595_18	UniRef90_A0A373VML2	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0099595_18	641112.ACOK01000073_gene2872	107.0	1.29e-24	N/A	N/A
structural_annotation	UHGV-0099595_18	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_19	phrog_253	95.1	3e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0099595_19	UniRef90_R6R2R3	355.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0099595_19	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0099595_19	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_20	phrog_1366	237.3	0	N/A	unknown function
UniRef90	UHGV-0099595_20	UniRef90_R6S946	592.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_20	1410670.JHXF01000015_gene2269	377.0	0	AAA domain	N/A
Pfam	UHGV-0099595_20	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0099595_20	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0099595_20	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0099595_21	K19789	307.9	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0099595_21	phrog_16	264.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0099595_21	UniRef90_R6RJE0	909.0	0	DNA or RNA helicases of superfamily II	N/A
eggNOG-mapper	UHGV-0099595_21	1410670.JHXF01000015_gene2270	573.0	0	helicase	N/A
PADLOC	UHGV-0099595_21	mREase_IV_00005	96.0	5e-29	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0099595_21	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0099595_21	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0099595_21	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0099595_21	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_22	phrog_5702	81.6	1.6e-24	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0099595_22	UniRef90_A0A6N4AKU7	209.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_22	1410670.JHXF01000015_gene2271	141.0	2.74935e-42	VRR_NUC	N/A
Pfam	UHGV-0099595_22	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0099595_22	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_23	phrog_378	101.1	1.3e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0099595_23	UniRef90_UPI0019172865	131.0	1.87e-35	N/A	N/A
eggNOG-mapper	UHGV-0099595_23	1002809.SSIL_1401	52.4	0.00000424	N/A	N/A
Pfam	UHGV-0099595_23	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0099595_23	PF05037,NF004948	N/A	N/A	N/A	N/A
KOfam	UHGV-0099595_24	K06919	107.3	1.4e-31	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0099595_24	phrog_1829	854.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0099595_24	UniRef90_A0A6N4ALN1	1552.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_24	1410670.JHXF01000015_gene2274	849.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0099595_24	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0099595_24	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0099595_24	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0099595_24	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0099595_24	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0099595_24	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_27	phrog_924	42.7	3.4e-22	N/A	unknown function
UniRef90	UHGV-0099595_27	UniRef90_UPI001EF68F75	53.9	0.0000034	N/A	N/A
Pfam	UHGV-0099595_27	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0099595_29	phrog_36	82.4	5.9e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0099595_29	UniRef90_UPI000377A925	84.0	7.02e-18	N/A	N/A
eggNOG-mapper	UHGV-0099595_29	1392487.JIAD01000001_gene536	80.1	2.61e-17	sigma factor activity	N/A
COG	UHGV-0099595_29	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0099595_29	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0099595_30	K07451	48.2	0.0000000000002	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0099595_30	phrog_144	78.9	5.7e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0099595_30	UniRef90_B0MKX5	339.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_30	1414720.CBYM010000002_gene577	108.0	1.08e-27	HNH nucleases	N/A
Pfam	UHGV-0099595_30	PF01844	N/A	N/A	HNH endonuclease	HNH
UniRef90	UHGV-0099595_31	UniRef90_UPI001898F58A	89.4	4.91e-19	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0099595_31	1414720.CBYM010000002_gene576	119.0	2.61e-31	N/A	N/A
structural_annotation	UHGV-0099595_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_32	phrog_12	211.9	0	portal protein	head and packaging
UniRef90	UHGV-0099595_32	UniRef90_D4JVJ5	1010.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0099595_32	397288.C806_00075	324.0	0	Portal protein	N/A
Pfam	UHGV-0099595_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0099595_32	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0099595_32	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0099595_32	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0099595_33	552398.HMPREF0866_03087	123.0	1.14e-32	N/A	N/A
PHROG	UHGV-0099595_34	phrog_289	63.1	4.7e-18	GTP-binding domain	other
UniRef90	UHGV-0099595_34	UniRef90_A0A413G088	274.0	0	N/A	N/A
eggNOG-mapper	UHGV-0099595_34	500632.CLONEX_01013	293.0	0	N/A	N/A
Pfam	UHGV-0099595_34	PF06908	N/A	N/A	YspA SLOG family	YpsA
COG	UHGV-0099595_34	COG4474	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0099595_34	PF06908,MF_01575,NF010181,COG4474	N/A	N/A	N/A	N/A
KOfam	UHGV-0099595_35	K22300	59.8	6.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0099595_35	phrog_8	54.5	0.0000000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-0099595_35	UniRef90_A0A367GL88	215.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0099595_35	500632.CLONEX_01012	185.0	0	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0099595_35	retron_type_VI_hth_cluster2_1	45.2	0.0000000000023	N/A	Retron
Pfam	UHGV-0099595_35	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0099595_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0099595_35	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0099595_36	phrog_3777	98.2	1.2e-29	N/A	unknown function
UniRef90	UHGV-0099595_36	UniRef90_A0A0D8IXT2	1071.0	0	Antirestriction protein	N/A
eggNOG-mapper	UHGV-0099595_36	500632.CLONEX_01011	1089.0	0	N/A	N/A
Pfam	UHGV-0099595_36	PF07275	N/A	N/A	Antirestriction protein (ArdA)	ArdA
Pfam	UHGV-0099595_36	PF12957	N/A	N/A	N/A	DUF3846
Pfam	UHGV-0099595_36	PF18832	N/A	N/A	Large polyvalent protein-associated domain 18	LPD18
Pfam	UHGV-0099595_36	PF14195	N/A	N/A	N/A	DUF4316
COG	UHGV-0099595_36	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
UniRef90	UHGV-0099595_37	UniRef90_UPI00051CAB6D	110.0	2.03e-30	transposon-transfer assisting family protein	N/A
eggNOG-mapper	UHGV-0099595_37	500632.CLONEX_01010	138.0	2.46068e-42	Putative tranposon-transfer assisting protein	N/A
Pfam	UHGV-0099595_37	PF14203	N/A	N/A	Putative transposon-transfer assisting protein	TTRAP
structural_annotation	UHGV-0099595_37	PF14203	N/A	N/A	N/A	N/A
UniRef90	UHGV-0099595_38	UniRef90_A0A1E3U676	660.0	0	MutS_I domain-containing protein	N/A
eggNOG-mapper	UHGV-0099595_38	500632.CLONEX_01009	654.0	0	N/A	N/A
Pfam	UHGV-0099595_38	PF01624	N/A	N/A	MutS domain I	MutS_I
COG	UHGV-0099595_38	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0099595	Yes	26,540	46	72	1