Viral OTU vOTU-128302

vOTU: vOTU-128302

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-128302
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-00161 → vOTU-128302
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0171034
Biosample ID	SAMN06165229
Length	20,262 bps
CheckV Completeness	51.97% (Medium-quality)
CDS Count	28
CDS Density	90.48%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0171034_1	K08757	52.0	9.2e-19	APOA1; apolipoprotein A-I	N/A
PHROG	UHGV-0171034_1	phrog_17020	120.2	0	N/A	unknown function
UniRef90	UHGV-0171034_1	UniRef90_A0A1C5T6M3	229.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0171034_1	411468.CLOSCI_01499	152.0	4.19e-37	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0171034_1	PF01442	N/A	N/A	Apolipoprotein A1/A4/E domain	Apolipoprotein
COG	UHGV-0171034_1	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
PHROG	UHGV-0171034_2	phrog_33	55.7	0.0000000000000014	distal tail protein Dit	tail
UniRef90	UHGV-0171034_2	UniRef90_UPI001D05C493	432.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0171034_2	411459.RUMOBE_01724	232.0	0	phage tail	N/A
COG	UHGV-0171034_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0171034_2	PF20753,PF19266,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_3	phrog_18110	478.5	0	N/A	unknown function
UniRef90	UHGV-0171034_3	UniRef90_A0A373S6M8	1161.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_3	411459.RUMOBE_01723	408.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0171034_3	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0171034_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0171034_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0171034_3	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_6	phrog_31398	118.6	1.7e-40	N/A	unknown function
UniRef90	UHGV-0171034_6	UniRef90_A0A350S494	466.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_6	411459.RUMOBE_01721	129.0	1.2e-32	N/A	N/A
Pfam	UHGV-0171034_6	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0171034_6	PF10651,NF033814,COG2372	N/A	N/A	N/A	N/A
Pfam	UHGV-0171034_7	PF11839	N/A	N/A	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
PHROG	UHGV-0171034_8	phrog_5302	247.9	0	tail protein	tail
eggNOG-mapper	UHGV-0171034_8	742741.HMPREF9475_00438	317.0	0	N/A	N/A
structural_annotation	UHGV-0171034_8	COG1262	N/A	N/A	N/A	N/A
KOfam	UHGV-0171034_9	K00986	119.9	2.5e-35	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0171034_9	phrog_1423	237.1	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171034_9	UniRef90_A0A412T739	885.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_9	411468.CLOSCI_01505	320.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0171034_9	drt-UG2	79.2	6.3e-23	DRT	DRT
Pfam	UHGV-0171034_9	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0171034_9	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0171034_9	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_10	phrog_20201	52.0	0.000000000000013	N/A	unknown function
PHROG	UHGV-0171034_11	phrog_134	47.3	0.00000000000029	N/A	unknown function
UniRef90	UHGV-0171034_11	UniRef90_A0A414EC84	93.6	2.73e-24	XkdX family protein	N/A
eggNOG-mapper	UHGV-0171034_11	411468.CLOSCI_01507	83.2	6.08e-21	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0171034_11	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0171034_11	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0171034_11	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_12	phrog_29601	120.4	5.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-0171034_12	411468.CLOSCI_01508	101.0	3.13e-27	N/A	N/A
PHROG	UHGV-0171034_13	phrog_1863	54.2	0.0000000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0171034_13	742741.HMPREF9475_00442	102.0	2.64e-27	N/A	N/A
PHROG	UHGV-0171034_14	phrog_33302	145.9	9.94922e-44	N/A	unknown function
eggNOG-mapper	UHGV-0171034_14	742741.HMPREF9475_00443	117.0	1.26e-32	N/A	N/A
PHROG	UHGV-0171034_15	phrog_36029	205.6	0	N/A	unknown function
UniRef90	UHGV-0171034_15	UniRef90_A0A345BPS8	118.0	4.11e-32	Holin of superfamily 6	N/A
eggNOG-mapper	UHGV-0171034_15	742741.HMPREF9475_00444	179.0	0	N/A	N/A
structural_annotation	UHGV-0171034_15	PF09682	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_16	phrog_14030	190.4	0	N/A	unknown function
UniRef90	UHGV-0171034_16	UniRef90_A0A174ZPS4	358.0	0	Bacterial SH3 domain	N/A
eggNOG-mapper	UHGV-0171034_16	742741.HMPREF9475_00446	322.0	0	N/A	N/A
Pfam	UHGV-0171034_16	PF08230	N/A	N/A	CW_7 repeat	CW_7
structural_annotation	UHGV-0171034_16	PF14627	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_17	phrog_33061	143.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0171034_17	411468.CLOSCI_01514	207.0	0	N/A	N/A
structural_annotation	UHGV-0171034_17	PF19087	N/A	N/A	N/A	N/A
KOfam	UHGV-0171034_18	K14059	151.1	1.26117e-44	int; integrase	N/A
PHROG	UHGV-0171034_18	phrog_1	155.3	0	integrase	integration and excision
UniRef90	UHGV-0171034_18	UniRef90_A0A0M6WRE3	722.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_18	585394.RHOM_02030	715.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0171034_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0171034_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0171034_18	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0171034_19	K22299	60.1	5.4e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0171034_19	phrog_8	61.7	1.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0171034_19	UniRef90_A0A0M6WTT4	288.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_19	585394.RHOM_02035	290.0	0	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0171034_19	retron_type_VI_hth_cluster2_1	47.2	0.0000000000005	N/A	Retron
Pfam	UHGV-0171034_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0171034_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0171034_20	phrog_6058	51.6	0.00000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0171034_20	585394.RHOM_02040	164.0	0	N/A	N/A
KOfam	UHGV-0171034_21	K04485	71.9	7.2e-21	radA, sms; DNA repair protein RadA/Sms	N/A
PHROG	UHGV-0171034_21	phrog_296	87.7	1.5e-25	DNA transposition protein	integration and excision
UniRef90	UHGV-0171034_21	UniRef90_G2T0J9	645.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_21	585394.RHOM_02045	645.0	0	N/A	N/A
Pfam	UHGV-0171034_21	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0171034_21	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0171034_21	PF00154,PF07848,MF_01498,MF_00173,TIGR00416,NF033789,COG3598	N/A	N/A	N/A	N/A
PHROG	UHGV-0171034_22	phrog_31146	99.8	3.2e-29	N/A	unknown function
UniRef90	UHGV-0171034_22	UniRef90_G2T0K0	683.0	0	Mobilization protein	N/A
eggNOG-mapper	UHGV-0171034_22	585394.RHOM_02050	683.0	0	N/A	N/A
Pfam	UHGV-0171034_22	PF01076	N/A	N/A	Plasmid recombination enzyme	Mob_Pre
COG	UHGV-0171034_22	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
PHROG	UHGV-0171034_23	phrog_3941	92.0	4.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0171034_23	298386.PBPRB0556	65.9	0.000000000000414	N/A	N/A
UniRef90	UHGV-0171034_24	UniRef90_A0A0D0S966	153.0	2.38221e-44	TWA4_scaffold00001, whole genome shotgun sequence	N/A
eggNOG-mapper	UHGV-0171034_24	742735.HMPREF9467_03105	253.0	0	N/A	N/A
KOfam	UHGV-0171034_25	K19449	57.4	2.9e-16	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	N/A
PHROG	UHGV-0171034_25	phrog_5823	52.6	0.0000000000000073	transcriptional regulator	transcription regulation
UniRef90	UHGV-0171034_25	UniRef90_R5DXN2	143.0	3.54529e-43	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0171034_25	411461.DORFOR_01970	127.0	1.56e-37	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0171034_25	retron_type_VI_hth_cluster2_1	54.8	0.0000000000000028	N/A	Retron
Pfam	UHGV-0171034_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0171034_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0171034_27	K24451	73.4	1.3e-30	zim; modification methylase	N/A
PHROG	UHGV-0171034_27	phrog_12517	53.8	0.0000000000000028	N/A	unknown function
UniRef90	UHGV-0171034_27	UniRef90_UPI001A9C187D	322.0	0	methyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-0171034_27	515620.EUBELI_01771	313.0	0	DNA methylase	N/A
PADLOC	UHGV-0171034_27	MTase_II_00162	211.7	0	Type II methyltransferase	RM
Pfam	UHGV-0171034_27	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
Pfam	UHGV-0171034_27	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0171034_27	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0171034_28	K06223	270.6	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0171034_28	phrog_56	244.2	0	DNA methyltransferase	other
UniRef90	UHGV-0171034_28	UniRef90_R5E1G9	563.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-0171034_28	515620.EUBELI_01770	520.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0171034_28	MTase_II_00080	292.6	0	Type II methyltransferase	RM
Pfam	UHGV-0171034_28	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
NCBIFam	UHGV-0171034_28	TIGR00571.1	N/A	N/A	Dam family site-specific DNA-(adenine-N6)-methyltransferase	N/A
COG	UHGV-0171034_28	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0171034_28	PF02086,MF_01872,TIGR00571,COG0338	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0171034	Yes	20,262	42	52	1