Viral OTU vOTU-133540

vOTU: vOTU-133540

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-133540
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00027 → vGENUS-08661 → vOTU-133540
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1464246
Biosample ID	N/A
Length	34,604 bps
CheckV Completeness	75.57% (Medium-quality)
CDS Count	49
CDS Density	92.59%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1464246_2	phrog_6058	42.4	0.0000000000081	N/A	unknown function
structural_annotation	UHGV-1464246_2	NF033787	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_6	K03546	57.0	1.9e-16	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1464246_6	phrog_1499	482.3	0	N/A	unknown function
UniRef90	UHGV-1464246_6	UniRef90_A0A2N0UXU2	750.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-1464246_6	645991.Sgly_0320	502.0	0	domain protein	N/A
Pfam	UHGV-1464246_6	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1464246_6	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1464246_6	TIGR03185,COG5293	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_8	phrog_124	265.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464246_8	UniRef90_A0A2N0UXR5	691.0	0	Phage nucleotide-binding protein	N/A
eggNOG-mapper	UHGV-1464246_8	411462.DORLON_00811	430.0	0	AAA domain	N/A
Pfam	UHGV-1464246_8	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1464246_8	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_9	phrog_2698	176.9	0	N/A	unknown function
UniRef90	UHGV-1464246_9	UniRef90_UPI000F54335B	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464246_9	742723.HMPREF9477_00927	139.0	7.44e-40	N/A	N/A
structural_annotation	UHGV-1464246_9	PF17426,NF005674	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_10	K17677	362.6	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1464246_10	phrog_16	297.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464246_10	UniRef90_A0A412ULZ3	1048.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-1464246_10	1235798.C817_03499	837.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-1464246_10	mREase_IV_00005	132.0	5.1e-39	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1464246_10	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1464246_10	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1464246_10	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1464246_10	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_11	K07505	404.1	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1464246_11	phrog_2597	1172.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464246_11	UniRef90_A0A2N0UXP7	1456.0	0	Regulatory protein RepA	N/A
eggNOG-mapper	UHGV-1464246_11	394503.Ccel_3304	962.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1464246_11	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1464246_11	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1464246_11	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1464246_11	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_12	phrog_140	92.7	4.4e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464246_12	UniRef90_A0A2N0UXU6	256.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1464246_12	411462.DORLON_00806	204.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1464246_12	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1464246_12	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1464246_12	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464246_13	PF02559,MF_00667,TIGR02861	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_16	K00390	96.6	2.9e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1464246_16	phrog_424	121.2	8.2e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1464246_16	UniRef90_UPI001C034617	570.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1464246_16	1408437.JNJN01000032_gene2312	331.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1464246_16	BrxP_00001	81.8	4.5e-24	BrxP	BREX
Pfam	UHGV-1464246_16	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1464246_16	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1464246_16	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1464246_17	UniRef90_UPI000E4DC4DA	142.0	1.32e-40	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1464246_17	PF15597	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_19	phrog_36	81.4	1.3e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1464246_19	UniRef90_A0A2N0UXQ6	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464246_19	1401067.HMPREF0872_06835	95.5	2.58e-23	N/A	N/A
Pfam	UHGV-1464246_19	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1464246_19	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_20	K06909	397.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1464246_20	phrog_3717	146.4	5.60519e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1464246_20	UniRef90_A0A2N0ULW5	1031.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1464246_20	411461.DORFOR_01162	616.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1464246_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1464246_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1464246_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1464246_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1464246_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_21	phrog_533	322.3	0	portal protein	head and packaging
UniRef90	UHGV-1464246_21	UniRef90_A0A2N0ULU9	816.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1464246_21	1304866.K413DRAFT_3035	470.0	0	N/A	N/A
structural_annotation	UHGV-1464246_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_22	phrog_581	315.0	0	minor head protein	head and packaging
UniRef90	UHGV-1464246_22	UniRef90_A0A2N0ULU5	738.0	0	Putative ADP-ribosyltransferase Certhrax	N/A
eggNOG-mapper	UHGV-1464246_22	658655.HMPREF0988_02563	369.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1464246_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1464246_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464246_22	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_24	phrog_478	129.3	1.5e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1464246_24	UniRef90_A0A285PT53	146.0	1.03976e-42	Prokaryotic membrane lipoprotein lipid attachment site profile	N/A
eggNOG-mapper	UHGV-1464246_24	478749.BRYFOR_08526	148.0	2.24208e-44	N/A	N/A
PHROG	UHGV-1464246_25	phrog_2616	45.3	0.0000000000018	N/A	unknown function
structural_annotation	UHGV-1464246_25	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_26	phrog_194	100.5	2e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-1464246_26	UniRef90_A0A2N0ULW9	335.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1464246_26	742765.HMPREF9457_02126	176.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1464246_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1464246_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_27	phrog_422	228.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-1464246_27	693746.OBV_18090	396.0	0	N/A	N/A
structural_annotation	UHGV-1464246_27	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_28	phrog_541	80.4	1.9e-23	head-tail adaptor	connector
UniRef90	UHGV-1464246_28	UniRef90_A0A371AQT0	109.0	1.94e-28	N/A	N/A
eggNOG-mapper	UHGV-1464246_28	1449050.JNLE01000003_gene3888	82.0	1.7e-18	N/A	N/A
PHROG	UHGV-1464246_29	phrog_3366	72.0	7.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1464246_29	1449050.JNLE01000003_gene3887	85.5	1.47e-19	N/A	N/A
Pfam	UHGV-1464246_29	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1464246_29	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_30	phrog_556	121.9	1.8e-36	minor head protein	head and packaging
UniRef90	UHGV-1464246_30	UniRef90_UPI00189BC4F9	177.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1464246_30	1449050.JNLE01000003_gene3886	172.0	0	N/A	N/A
Pfam	UHGV-1464246_30	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1464246_30	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_31	phrog_3266	102.6	2.8e-30	tail completion	connector
eggNOG-mapper	UHGV-1464246_31	1449050.JNLE01000003_gene3885	144.0	1.86933e-42	N/A	N/A
structural_annotation	UHGV-1464246_31	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_32	phrog_3099	149.7	1.26117e-44	N/A	unknown function
eggNOG-mapper	UHGV-1464246_32	1160721.RBI_II00532	237.0	0	N/A	N/A
structural_annotation	UHGV-1464246_32	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_33	phrog_11299	138.7	2.79993e-41	N/A	unknown function
eggNOG-mapper	UHGV-1464246_33	1449050.JNLE01000003_gene3883	98.2	3.05e-24	N/A	N/A
structural_annotation	UHGV-1464246_33	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_34	phrog_706	139.5	1.99993e-41	N/A	unknown function
UniRef90	UHGV-1464246_34	UniRef90_A0A2N0ULW2	369.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1464246_34	1160721.RBI_II00530	211.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1464246_34	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1464246_34	PF06854	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464246_35	1280676.AUJO01000035_gene2160	76.6	0.000000000000414	N/A	N/A
structural_annotation	UHGV-1464246_35	PF07718,PF02883,NF007398,COG3121	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_36	phrog_1535	465.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1464246_36	UniRef90_A0A2N0ULX3	1430.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1464246_36	33035.JPJF01000093_gene2243	348.0	0	phage tail tape measure protein	N/A
COG	UHGV-1464246_36	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1464246_36	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_37	phrog_1194	58.2	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1464246_37	397290.C810_05238	95.1	3.61e-23	N/A	N/A
Pfam	UHGV-1464246_37	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1464246_37	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464246_38	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464246_39	PF08931	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_41	phrog_1863	71.8	7.5e-22	N/A	unknown function
UniRef90	UHGV-1464246_41	UniRef90_UPI001F223E8B	90.9	2.7e-22	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-1464246_41	1203606.HMPREF1526_02027	81.6	1.99e-19	N/A	N/A
PHROG	UHGV-1464246_42	phrog_443	63.0	7.8e-18	holin	lysis
UniRef90	UHGV-1464246_42	UniRef90_R6MWB0	89.7	3.42e-22	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1464246_42	1298920.KI911353_gene2669	82.0	6.09e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1464246_42	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
PHROG	UHGV-1464246_43	phrog_918	117.2	5e-35	N/A	unknown function
UniRef90	UHGV-1464246_43	UniRef90_UPI001E4BD730	122.0	8.9e-35	N/A	N/A
eggNOG-mapper	UHGV-1464246_43	1499683.CCFF01000014_gene3910	115.0	8.76e-33	N/A	N/A
Pfam	UHGV-1464246_43	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1464246_43	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_44	K01447	57.6	2.7e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1464246_44	phrog_20388	309.5	0	endolysin	lysis
UniRef90	UHGV-1464246_44	UniRef90_A0A374N1L8	537.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1464246_44	1203606.HMPREF1526_00253	320.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1464246_44	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1464246_44	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1464246_44	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1464246_44	PF01510,PF01476,PF15591,MF_02014,MF_04111,MF_01354,NF008758,NF010723,TIGR00405,COG3023,COG5004,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_45	K00571	154.0	1.4013e-45	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1464246_45	phrog_67	126.7	1.3e-39	DNA methyltransferase	other
UniRef90	UHGV-1464246_45	UniRef90_A0A412UM21	392.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1464246_45	1226322.HMPREF1545_02860	159.0	0	N/A	N/A
PADLOC	UHGV-1464246_45	MTase_II_00157	135.9	2.29995e-41	Type II methyltransferase	RM
Pfam	UHGV-1464246_45	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1464246_45	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1464246_45	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1464246_48	phrog_3782	78.3	3.3e-23	N/A	unknown function
UniRef90	UHGV-1464246_48	UniRef90_A0A3D2QWM1	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464246_48	411902.CLOBOL_04119	121.0	1.29e-34	N/A	N/A
Pfam	UHGV-1464246_48	PF14192	N/A	N/A	N/A	DUF4314
COG	UHGV-1464246_48	COG2105	N/A	N/A	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	N/A
structural_annotation	UHGV-1464246_48	PF14192,MF_00754,NF003019	N/A	N/A	N/A	N/A
KOfam	UHGV-1464246_49	K00558	204.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1464246_49	phrog_116	202.0	0	DNA methyltransferase	other
UniRef90	UHGV-1464246_49	UniRef90_A0A2N0UNB0	442.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1464246_49	697329.Rumal_1386	286.0	0	N/A	N/A
PADLOC	UHGV-1464246_49	MTase_II_00058	208.2	0	Type II methyltransferase	RM
Pfam	UHGV-1464246_49	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1464246_49	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1464246_49	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1464246_49	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1464246	Yes	34,604	42	76	1