Viral OTU vOTU-135314

vOTU: vOTU-135314

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-135314
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00108 → vOTU-135314
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0015059
Biosample ID	SAMEA4969186
Length	24,484 bps
CheckV Completeness	56.77% (Medium-quality)
CDS Count	44
CDS Density	88.76%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0015059_2	phrog_115	431.4	0	minor head protein	head and packaging
UniRef90	UHGV-0015059_2	UniRef90_A0A413SP88	604.0	0	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0015059_2	742740.HMPREF9474_02356	431.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0015059_2	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0015059_2	PF07737	N/A	N/A	Anthrax toxin lethal factor, N- and C-terminal domain	ATLF
NCBIFam	UHGV-0015059_2	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0015059_2	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015059_2	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_3	phrog_64	360.7	0	portal protein	head and packaging
UniRef90	UHGV-0015059_3	UniRef90_A0A6L6XEV1	860.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0015059_3	1042156.CXIVA_01850	632.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0015059_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0015059_3	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0015059_3	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0015059_5	K06909	154.7	1.4013e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0015059_5	phrog_10250	234.3	0	N/A	unknown function
UniRef90	UHGV-0015059_5	UniRef90_A0A173S6P4	852.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0015059_5	903814.ELI_3215	659.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0015059_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0015059_5	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0015059_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0015059_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0015059_5	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0015059_6	K07474	119.5	4.9e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0015059_6	phrog_2606	209.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0015059_6	UniRef90_A0A6L6XD66	432.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0015059_6	411490.ANACAC_00784	255.0	0	terminase, small subunit	N/A
Pfam	UHGV-0015059_6	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0015059_6	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0015059_6	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0015059_6	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_7	phrog_36	69.3	5.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015059_7	UniRef90_A0A173S7S0	221.0	0	RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	N/A
eggNOG-mapper	UHGV-0015059_7	1235800.C819_02243	120.0	8.73e-33	N/A	N/A
structural_annotation	UHGV-0015059_7	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_8	phrog_10601	46.7	0.00000000000044	N/A	unknown function
eggNOG-mapper	UHGV-0015059_8	525146.Ddes_0233	60.1	0.000000000103	N/A	N/A
PHROG	UHGV-0015059_10	phrog_874	170.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0015059_10	632245.CLP_1629	174.0	0	N/A	N/A
structural_annotation	UHGV-0015059_10	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_11	phrog_20593	60.6	2.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0015059_13	1235800.C819_02246	52.4	0.00000535	N/A	N/A
PHROG	UHGV-0015059_14	phrog_8684	88.1	2.3e-26	N/A	unknown function
UniRef90	UHGV-0015059_14	UniRef90_A0A412KF78	158.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0015059_14	411470.RUMGNA_02199	82.0	4.31e-18	N/A	N/A
Pfam	UHGV-0015059_14	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0015059_14	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0015059_14	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_16	phrog_15198	46.2	0.00000000000075	N/A	unknown function
UniRef90	UHGV-0015059_16	UniRef90_UPI00156ED5AF	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0015059_16	1256908.HMPREF0373_00667	117.0	2.03e-32	N/A	N/A
Pfam	UHGV-0015059_16	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0015059_16	NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015059_19	411459.RUMOBE_01111	79.3	7.91e-17	N/A	N/A
KOfam	UHGV-0015059_20	K06223	230.6	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0015059_20	phrog_56	172.3	0	DNA methyltransferase	other
UniRef90	UHGV-0015059_20	UniRef90_UPI001C01F42B	509.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0015059_20	411468.CLOSCI_00302	369.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0015059_20	MTase_II_00030	282.6	0	Type II methyltransferase	RM
Pfam	UHGV-0015059_20	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0015059_20	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0015059_20	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_21	phrog_424	71.6	1e-20	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0015059_21	UniRef90_A0A2H4JC51	441.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-0015059_21	693746.OBV_43240	534.0	0	N/A	N/A
COG	UHGV-0015059_21	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0015059_21	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015059_22	1232453.BAIF02000057_gene1147	81.6	6.9e-19	N/A	N/A
PHROG	UHGV-0015059_24	phrog_16304	93.4	3.6e-27	N/A	unknown function
UniRef90	UHGV-0015059_24	UniRef90_UPI001F3474DD	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-0015059_24	33035.JPJF01000071_gene4467	104.0	2.52e-24	N/A	N/A
AcrCatalog	UHGV-0015059_24	cluster_14472	100.0	2.76e-27	NA	N/A
Pfam	UHGV-0015059_24	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0015059_24	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0015059_25	K01160	57.0	5.7e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0015059_25	phrog_1682	74.4	1.8e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015059_25	UniRef90_A0A415TWS7	228.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0015059_25	1235790.C805_00029	112.0	5.31e-30	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0015059_25	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
PHROG	UHGV-0015059_26	phrog_373	172.1	0	anti-repressor	transcription regulation
UniRef90	UHGV-0015059_26	UniRef90_UPI0018A6ABED	419.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015059_26	536232.CLM_1619	178.0	0	ORF6C domain	N/A
Pfam	UHGV-0015059_26	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0015059_26	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-0015059_26	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0015059_26	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0015059_26	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_27	phrog_398	215.1	0	N/A	unknown function
UniRef90	UHGV-0015059_27	UniRef90_UPI0001F01BA5	296.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0015059_27	33035.JPJF01000122_gene2462	291.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0015059_27	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0015059_27	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_28	phrog_659	205.3	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015059_28	UniRef90_UPI00020DA31D	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-0015059_28	411490.ANACAC_00805	220.0	0	N/A	N/A
Pfam	UHGV-0015059_28	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0015059_28	PF06378,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015059_31	397290.C810_05159	48.1	0.000000694	N/A	N/A
structural_annotation	UHGV-0015059_33	PF13560,MF_00535,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015059_37	UniRef90_R6WAU3	101.0	1.72e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0015059_37	1131462.DCF50_p1826	54.3	0.0000000114	Helix-turn-helix XRE-family like proteins	N/A
UniRef90	UHGV-0015059_39	UniRef90_A0A6N3H7Q7	110.0	2.7e-30	Helix-turn-helix domain protein	N/A
Pfam	UHGV-0015059_39	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0015059_39	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0015059_39	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0015059_40	K22300	68.5	1.2e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0015059_40	phrog_8	60.2	4.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015059_40	UniRef90_UPI001C0368C0	264.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015059_40	1235790.C805_00592	132.0	6.33e-37	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0015059_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0015059_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0015059_40	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_41	phrog_87	86.9	1.8e-25	metallo-protease	other
UniRef90	UHGV-0015059_41	UniRef90_A0A3R6AQ03	194.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0015059_41	397288.C806_00132	180.0	0	Zn peptidase	N/A
Pfam	UHGV-0015059_41	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0015059_41	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0015059_41	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_42	phrog_9418	142.8	1.10002e-42	N/A	unknown function
eggNOG-mapper	UHGV-0015059_42	411462.DORLON_00822	183.0	0	N/A	N/A
structural_annotation	UHGV-0015059_42	PF10233	N/A	N/A	N/A	N/A
PHROG	UHGV-0015059_43	phrog_806	58.6	2.3e-17	N/A	unknown function
UniRef90	UHGV-0015059_43	UniRef90_UPI00042965C2	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0015059_43	1235790.C805_00600	128.0	4.34e-34	N/A	N/A
Pfam	UHGV-0015059_43	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0015059_43	PF11611,MF_00791,TIGR04209,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-0015059_44	K14623	358.4	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-0015059_44	phrog_8036	387.1	0	N/A	unknown function
UniRef90	UHGV-0015059_44	UniRef90_A0A416EXR8	426.0	0	DNA damage-inducible protein D	N/A
eggNOG-mapper	UHGV-0015059_44	665950.HMPREF1025_02565	418.0	0	N/A	N/A
AcrCatalog	UHGV-0015059_44	cluster_17589	147.0	3.78351e-44	NA	N/A
PADLOC	UHGV-0015059_44	Specificity_I_00032	341.9	0	Type I specificity subunit	RM
Pfam	UHGV-0015059_44	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-0015059_44	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-0015059_44	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0015059_44	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0015059	Yes	24,484	43	57	1