Viral OTU vOTU-136769

vOTU: vOTU-136769

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-136769
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00043 → vOTU-136769
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0034843
Biosample ID	SAMEA4765847
Length	21,070 bps
CheckV Completeness	50.14% (Medium-quality)
CDS Count	29
CDS Density	94.60%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0034843_2	phrog_38078	46.9	0.0000000000000084	N/A	unknown function
UniRef90	UHGV-0034843_2	UniRef90_A0A412SB50	460.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0034843_2	476272.RUMHYD_00843	204.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0034843_2	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0034843_2	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0034843_2	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0034843_2	PF08239,PF09953,NF040678,COG3942,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_3	phrog_1129	65.8	4.6e-19	holin	lysis
UniRef90	UHGV-0034843_3	UniRef90_UPI001C01C03F	173.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0034843_3	33035.JPJF01000093_gene2233	141.0	9.66896e-43	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0034843_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0034843_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_4	phrog_4105	76.1	3.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0034843_4	397288.C806_00056	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034843_5	457412.RSAG_04673	69.3	0.00000000000000238	N/A	N/A
KOfam	UHGV-0034843_8	K00986	95.6	5.6e-28	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0034843_8	phrog_1423	185.8	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034843_8	UniRef90_A0A1C5PK20	445.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-0034843_8	1160721.RBI_I01568	230.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0034843_8	icity0040	82.7	6.6e-24	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0034843_8	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0034843_8	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0034843_8	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034843_9	658655.HMPREF0988_00872	61.6	0.000000000304	N/A	N/A
structural_annotation	UHGV-0034843_9	PF05635,MF_04067,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_10	phrog_19280	99.0	4e-29	N/A	unknown function
UniRef90	UHGV-0034843_10	UniRef90_A0A413UF00	423.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034843_10	1160721.RBI_I01569	132.0	2.22e-31	N/A	N/A
Pfam	UHGV-0034843_10	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0034843_10	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034843_11	457412.RSAG_01112	87.0	6.89e-16	N/A	N/A
PHROG	UHGV-0034843_12	phrog_16164	207.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0034843_12	457412.RSAG_01113	79.7	0.00000000000000478	N/A	N/A
structural_annotation	UHGV-0034843_12	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-0034843_13	K16628	63.9	5.2e-19	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0034843_13	phrog_6616	645.1	0	tail protein	tail
UniRef90	UHGV-0034843_13	UniRef90_UPI0018978488	1457.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0034843_13	428127.EUBDOL_01565	183.0	8.40779e-44	cellulase activity	N/A
Pfam	UHGV-0034843_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0034843_13	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0034843_13	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0034843_13	PF05113,PF18957,PF16407,NF033848,NF011782,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_14	phrog_1194	99.0	3.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0034843_14	1121866.AUGK01000003_gene1438	83.6	4.76e-19	N/A	N/A
Pfam	UHGV-0034843_14	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0034843_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_15	phrog_1535	211.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0034843_15	UniRef90_A0A1C5L9Y5	574.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0034843_15	1304866.K413DRAFT_3046	197.0	0	N/A	N/A
COG	UHGV-0034843_15	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0034843_16	phrog_2066	46.3	0.00000000000071	N/A	unknown function
PHROG	UHGV-0034843_17	phrog_183	55.5	9e-16	tail chaperone protein	tail
UniRef90	UHGV-0034843_17	UniRef90_UPI0011DE12FE	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034843_17	742733.HMPREF9469_01816	126.0	2.13e-35	N/A	N/A
Pfam	UHGV-0034843_17	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0034843_17	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_18	phrog_158	54.1	0.0000000000000032	major tail protein	tail
UniRef90	UHGV-0034843_18	UniRef90_UPI001D00B776	241.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0034843_18	742733.HMPREF9469_01817	186.0	0	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0034843_18	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034843_19	1235800.C819_00480	144.0	4.87652e-43	N/A	N/A
structural_annotation	UHGV-0034843_19	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_20	phrog_5	100.1	2.3e-29	tail completion or Neck1 protein	connector
UniRef90	UHGV-0034843_20	UniRef90_UPI00189D840F	317.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0034843_20	742733.HMPREF9469_01819	187.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0034843_20	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0034843_20	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0034843_20	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_21	phrog_2168	98.3	4.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0034843_21	742733.HMPREF9469_01820	135.0	2.46e-39	N/A	N/A
structural_annotation	UHGV-0034843_21	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_22	phrog_132	71.1	1.1e-20	head-tail adaptor	connector
UniRef90	UHGV-0034843_22	UniRef90_UPI0019200044	174.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0034843_22	742733.HMPREF9469_01821	147.0	2.24208e-44	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0034843_22	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0034843_22	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_23	phrog_2724	67.6	1.9e-19	N/A	unknown function
UniRef90	UHGV-0034843_23	UniRef90_UPI001D012ED8	122.0	6.21e-35	Rho termination factor N-terminal domain-containing protein	N/A
Pfam	UHGV-0034843_23	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
structural_annotation	UHGV-0034843_23	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_24	phrog_422	291.9	0	major head protein	head and packaging
UniRef90	UHGV-0034843_24	UniRef90_A0A2H4JCM6	489.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0034843_24	742733.HMPREF9469_01823	492.0	0	N/A	N/A
structural_annotation	UHGV-0034843_24	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_25	phrog_172	162.8	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0034843_25	UniRef90_UPI001D01F670	335.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034843_25	742733.HMPREF9469_01824	214.0	0	N/A	N/A
Pfam	UHGV-0034843_25	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0034843_25	PF14265	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034843_26	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_27	phrog_918	127.4	3.3e-38	N/A	unknown function
UniRef90	UHGV-0034843_27	UniRef90_UPI000E468F85	133.0	7.05e-39	N/A	N/A
eggNOG-mapper	UHGV-0034843_27	298338.Q5ULN6_9CAUD	125.0	3.4e-36	N/A	N/A
Pfam	UHGV-0034843_27	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0034843_27	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_28	phrog_355	60.3	3e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034843_28	UniRef90_UPI00156F0E9C	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034843_28	397290.C810_05229	165.0	0	N/A	N/A
Pfam	UHGV-0034843_28	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0034843_28	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0034843_29	phrog_34731	51.4	0.000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0034843_29	1400520.LFAB_08810	69.3	0.00000000000000321	N/A	N/A
structural_annotation	UHGV-0034843_29	PF02699,MF_00369,TIGR00739,COG5475	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0034843	Yes	21,070	44	50	1