Viral OTU vOTU-137060

vOTU: vOTU-137060

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-137060
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00150 → vGENUS-02930 → vOTU-137060
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0074975
Biosample ID	N/A
Length	35,665 bps
CheckV Completeness	59.10% (Medium-quality)
CDS Count	54
CDS Density	93.30%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0074975_1	K02346	369.4	0	dinB; DNA polymerase IV [EC:2.7.7.7]	N/A
PHROG	UHGV-0074975_1	phrog_1268	309.2	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074975_1	UniRef90_A0A3E5EHL4	720.0	0	DNA polymerase IV	N/A
eggNOG-mapper	UHGV-0074975_1	411459.RUMOBE_00798	650.0	0	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	N/A
Pfam	UHGV-0074975_1	PF00817	N/A	N/A	impB/mucB/samB family	IMS
Pfam	UHGV-0074975_1	PF11799	N/A	N/A	impB/mucB/samB family C-terminal domain	IMS_C
COG	UHGV-0074975_1	COG0389	N/A	N/A	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	N/A
HAMAP	UHGV-0074975_1	MF_01113	N/A	N/A	DNA polymerase IV [dinB]	N/A
KOfam	UHGV-0074975_2	K05349	266.3	0	bglX; beta-glucosidase [EC:3.2.1.21]	N/A
UniRef90	UHGV-0074975_2	UniRef90_UPI00156F44EE	495.0	0	glycoside hydrolase family 3 protein	N/A
eggNOG-mapper	UHGV-0074975_2	33035.JPJF01000016_gene4168	530.0	0	Glycosyl hydrolase family 3 N terminal domain	N/A
Pfam	UHGV-0074975_2	PF00933	N/A	N/A	Glycosyl hydrolase family 3 N terminal domain	Glyco_hydro_3
COG	UHGV-0074975_2	COG1472	N/A	N/A	Periplasmic beta-glucosidase and related glycosidases	N/A
KOfam	UHGV-0074975_3	K05349	289.8	0	bglX; beta-glucosidase [EC:3.2.1.21]	N/A
UniRef90	UHGV-0074975_3	UniRef90_A0A1C6BP56	916.0	0	Thermostable beta-glucosidase B	N/A
eggNOG-mapper	UHGV-0074975_3	33035.JPJF01000016_gene4168	592.0	0	Glycosyl hydrolase family 3 N terminal domain	N/A
Pfam	UHGV-0074975_3	PF01915	N/A	N/A	Glycosyl hydrolase family 3 C-terminal domain	Glyco_hydro_3_C
Pfam	UHGV-0074975_3	PF14310	N/A	N/A	Fibronectin type III-like domain	Fn3-like
COG	UHGV-0074975_3	COG1472	N/A	N/A	Periplasmic beta-glucosidase and related glycosidases	N/A
KOfam	UHGV-0074975_4	K02855	152.0	4.2039e-45	rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS	N/A
PHROG	UHGV-0074975_4	phrog_11275	69.8	3e-20	N/A	unknown function
UniRef90	UHGV-0074975_4	UniRef90_A0A1C6BP05	553.0	0	L-rhamnose operon regulatory protein rhaS	N/A
eggNOG-mapper	UHGV-0074975_4	33035.JPJF01000016_gene4169	269.0	0	AraC-like ligand binding domain	N/A
Pfam	UHGV-0074975_4	PF02311	N/A	N/A	AraC-like ligand binding domain	AraC_binding
Pfam	UHGV-0074975_4	PF12833	N/A	N/A	Helix-turn-helix domain	HTH_18
COG	UHGV-0074975_4	COG2207	N/A	N/A	AraC-type DNA-binding domain and AraC-containing proteins	N/A
structural_annotation	UHGV-0074975_4	PF02311,PF12833,MF_01534,NF010026,COG2207,COG1917	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_6	phrog_25754	93.3	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0074975_6	1196322.A370_02055	94.0	1.64e-24	N/A	N/A
structural_annotation	UHGV-0074975_6	PF18195,MF_00257,NF041655,COG1923	N/A	N/A	N/A	N/A
KOfam	UHGV-0074975_9	K03111	135.7	5.5e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0074975_9	phrog_44	142.3	3.09967e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074975_9	UniRef90_A0A417WIZ8	261.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0074975_9	411460.RUMTOR_02590	195.0	0	N/A	N/A
Pfam	UHGV-0074975_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0074975_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0074975_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0074975_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0074975_9	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_10	phrog_9300	83.9	1.7e-24	N/A	unknown function
UniRef90	UHGV-0074975_10	UniRef90_UPI001E4B013D	92.8	5.3e-19	N/A	N/A
UniRef90	UHGV-0074975_11	UniRef90_UPI000C7E101D	132.0	3.45e-34	type II toxin-antitoxin system PemK/MazF family toxin	N/A
UniRef90	UHGV-0074975_12	UniRef90_A0A417NRE5	331.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0074975_14	1235802.C823_05483	137.0	2.02e-38	N/A	N/A
UniRef90	UHGV-0074975_15	UniRef90_A0A3R7C723	545.0	0	N/A	N/A
Pfam	UHGV-0074975_15	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0074975_15	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_16	phrog_33611	43.4	0.0000000000069	N/A	unknown function
eggNOG-mapper	UHGV-0074975_16	97139.C824_00149	61.6	0.000000000515	N/A	N/A
structural_annotation	UHGV-0074975_16	PF07215	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0074975_17	1410630.JNKP01000003_gene993	63.2	0.0000000000168	N/A	N/A
PHROG	UHGV-0074975_18	phrog_19458	306.9	0	primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074975_18	UniRef90_K1RXP0	257.0	0	N/A	N/A
eggNOG-mapper	UHGV-0074975_18	411459.RUMOBE_01108	288.0	0	N/A	N/A
COG	UHGV-0074975_18	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
UniRef90	UHGV-0074975_21	UniRef90_A0A417WJ68	216.0	0	XRE family transcriptional regulator	N/A
Pfam	UHGV-0074975_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0074975_21	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074975_21	PF01381,TIGR03070,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0074975_24	552398.HMPREF0866_00916	152.0	8.40779e-45	N/A	N/A
eggNOG-mapper	UHGV-0074975_25	742740.HMPREF9474_01220	66.2	0.000000000000127	N/A	N/A
PHROG	UHGV-0074975_27	phrog_16304	51.7	0.00000000000002	N/A	unknown function
UniRef90	UHGV-0074975_27	UniRef90_A0A3R6SL17	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0074975_27	33035.JPJF01000071_gene4467	52.4	0.0000011	N/A	N/A
Pfam	UHGV-0074975_27	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0074975_31	phrog_23451	83.6	8.2e-25	N/A	unknown function
UniRef90	UHGV-0074975_31	UniRef90_A0A3R6W5Y4	467.0	0	DarA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0074975_31	411459.RUMOBE_01101	289.0	0	N/A	N/A
Pfam	UHGV-0074975_31	PF18789	N/A	N/A	Defence against restriction A C-terminal	DarA_C
eggNOG-mapper	UHGV-0074975_33	445972.ANACOL_03327	70.9	0.0000000000021	N/A	N/A
structural_annotation	UHGV-0074975_33	PF12750,MF_00105,COG0140	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0074975_35	632245.CLP_2590	125.0	3.34e-32	N/A	N/A
KOfam	UHGV-0074975_36	K01447	108.7	8.9e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0074975_36	phrog_20388	236.1	0	endolysin	lysis
UniRef90	UHGV-0074975_36	UniRef90_A0A417NRG5	1002.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0074975_36	411463.EUBVEN_00418	319.0	0	Ami_2	N/A
Pfam	UHGV-0074975_36	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0074975_36	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0074975_36	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0074975_36	PF18013,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_37	phrog_6918	86.2	2.9e-25	holin	lysis
UniRef90	UHGV-0074975_37	UniRef90_A0A3R6ZH80	213.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0074975_37	1235792.C808_00574	132.0	1.47e-38	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0074975_37	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-0074975_37	TIGR01673.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0074975_37	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_39	phrog_9428	145.3	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0074975_39	UniRef90_A0A3R6VS34	180.0	0	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0074975_39	411470.RUMGNA_00253	139.0	3.26993e-41	N/A	N/A
PHROG	UHGV-0074975_41	phrog_134	50.2	0.000000000000039	N/A	unknown function
UniRef90	UHGV-0074975_41	UniRef90_A0A3R6YTG1	85.9	6.23e-21	XkdX family protein	N/A
eggNOG-mapper	UHGV-0074975_41	1151292.QEW_0674	50.8	0.0000000659	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0074975_41	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0074975_41	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0074975_41	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-0074975_43	K00986	111.2	1.2e-32	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0074975_43	phrog_1423	206.8	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074975_43	UniRef90_A0A3R6US98	708.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0074975_43	1160721.RBI_I01568	276.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0074975_43	icity0040	91.3	1.6e-26	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0074975_43	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0074975_43	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
PHROG	UHGV-0074975_44	phrog_3206	43.8	0.0000000000036	Avd protein of DGR	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0074975_44	PF05635,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_45	phrog_19280	101.5	6.8e-30	N/A	unknown function
UniRef90	UHGV-0074975_45	UniRef90_A0A3R6UNN4	782.0	0	N/A	N/A
eggNOG-mapper	UHGV-0074975_45	1160721.RBI_I01569	138.0	1.44e-33	N/A	N/A
Pfam	UHGV-0074975_45	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0074975_45	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_47	phrog_1780	69.8	3.5e-20	tail collar fiber protein	tail
UniRef90	UHGV-0074975_47	UniRef90_UPI001C02CD82	174.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0074975_47	1235802.C823_01095	181.0	0	Phage tail-collar fibre protein	N/A
Pfam	UHGV-0074975_47	PF12571	N/A	N/A	Phage tail-collar fibre protein	DUF3751
structural_annotation	UHGV-0074975_47	PF12571	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_48	phrog_21322	160.6	0	virion structural protein	head and packaging
UniRef90	UHGV-0074975_48	UniRef90_A0A417WJ96	415.0	0	N/A	N/A
eggNOG-mapper	UHGV-0074975_48	1235790.C805_00375	284.0	0	N/A	N/A
Pfam	UHGV-0074975_48	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-0074975_48	COG3778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074975_48	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_49	phrog_6	155.5	0	baseplate protein	tail
UniRef90	UHGV-0074975_49	UniRef90_R7N7N7	736.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-0074975_49	1235790.C805_00374	507.0	0	baseplate J-like protein	N/A
Pfam	UHGV-0074975_49	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0074975_49	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074975_49	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_50	phrog_120	65.2	9.6e-19	baseplate protein	tail
UniRef90	UHGV-0074975_50	UniRef90_A0A417WIR8	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0074975_50	1235790.C805_00373	202.0	0	N/A	N/A
Pfam	UHGV-0074975_50	PF10934	N/A	N/A	N/A	DUF2634
structural_annotation	UHGV-0074975_50	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_51	phrog_2403	75.1	8.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0074975_51	1200557.JHWV01000006_gene1711	93.2	1.08e-22	N/A	N/A
structural_annotation	UHGV-0074975_51	PF10844	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_52	phrog_400	185.1	0	tail protein	tail
UniRef90	UHGV-0074975_52	UniRef90_C6LG66	286.0	0	Phage minor structural protein, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0074975_52	1235790.C805_00371	495.0	0	N/A	N/A
structural_annotation	UHGV-0074975_52	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0074975_53	K22409	41.0	7.8e-20	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0074975_53	phrog_380	162.2	0	endolysin	lysis
UniRef90	UHGV-0074975_53	UniRef90_R7N9K6	471.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0074975_53	1235790.C805_00370	249.0	0	LysM domain protein	N/A
Pfam	UHGV-0074975_53	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0074975_53	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-0074975_53	PF19266,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0074975_54	phrog_19074	881.2	0	N/A	unknown function
UniRef90	UHGV-0074975_54	UniRef90_UPI001D116E58	2422.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0074975_54	1235790.C805_00369	815.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0074975_54	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-0074975_54	PF13488	N/A	N/A	Glycine zipper	Gly-zipper_Omp
NCBIFam	UHGV-0074975_54	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0074975_54	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0074975_54	PF10145,TIGR01760	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0074975	Yes	35,665	44	59	1