Viral OTU vOTU-139269

vOTU: vOTU-139269

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-139269
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-03063 → vGENUS-04170 → vOTU-139269
Host Lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B lactis
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0041335
Biosample ID	N/A
Length	31,433 bps
CheckV Completeness	68.24% (Medium-quality)
CDS Count	73
CDS Density	90.42%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0041335_1	phrog_1533	436.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0041335_1	UniRef90_UPI000F51E928	264.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0041335_1	35241.Q9AYV8_BPTU2	261.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0041335_1	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0041335_1	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
PHROG	UHGV-0041335_2	phrog_441	78.2	1.2e-22	tail assembly chaperone	tail
UniRef90	UHGV-0041335_2	UniRef90_A0A0K9N8J7	64.3	0.0000000000338	N/A	N/A
eggNOG-mapper	UHGV-0041335_2	568703.LGG_01136	63.2	0.0000000000168	N/A	N/A
PHROG	UHGV-0041335_3	phrog_183	40.7	0.000000000041	tail chaperone protein	tail
UniRef90	UHGV-0041335_3	UniRef90_A0A7H4KH65	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041335_3	682370.C9W9I6_9CAUD	79.7	1.24e-17	Pfam:Phage_TAC_12	N/A
Pfam	UHGV-0041335_3	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0041335_3	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_4	phrog_238	172.9	0	major tail protein	tail
UniRef90	UHGV-0041335_4	UniRef90_UPI000A353549	304.0	0	phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0041335_4	1201292.DR75_348	191.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0041335_4	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0041335_4	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0041335_4	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_5	phrog_176	86.9	2.2e-25	tail terminator	connector
UniRef90	UHGV-0041335_5	UniRef90_UPI00118564FA	131.0	6.9e-37	N/A	N/A
eggNOG-mapper	UHGV-0041335_5	1423724.BAMM01000023_gene1906	85.5	1.44e-19	N/A	N/A
structural_annotation	UHGV-0041335_5	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_6	phrog_5	60.8	3.5e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-0041335_6	UniRef90_UPI000CF31754	204.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0041335_6	883081.HMPREF9698_01611	71.6	0.000000000000013	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0041335_6	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0041335_6	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0041335_6	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_7	phrog_348	65.0	1.4e-18	minor head protein	head and packaging
UniRef90	UHGV-0041335_7	UniRef90_A0A139MCW8	75.5	0.00000000000000105	Putative phage protein	N/A
eggNOG-mapper	UHGV-0041335_7	663241.C9E2J7_9CAUD	73.9	8.75e-16	N/A	N/A
structural_annotation	UHGV-0041335_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_8	phrog_132	77.0	2.2e-22	head-tail adaptor	connector
UniRef90	UHGV-0041335_8	UniRef90_A0A097BY55	108.0	1.67e-28	Head-tail connector domain protein	N/A
eggNOG-mapper	UHGV-0041335_8	1486428.A0A097BY55_9CAUD	108.0	2.8e-29	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0041335_8	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0041335_8	PF05135	N/A	N/A	N/A	N/A
UniRef90	UHGV-0041335_9	UniRef90_UPI00032EAA26	189.0	0	fibronectin type III domain-containing protein	N/A
PHROG	UHGV-0041335_10	phrog_544	179.0	0	major head protein	head and packaging
UniRef90	UHGV-0041335_10	UniRef90_UPI00137A7C7D	176.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0041335_10	1214217.ALNF01000014_gene1375	156.0	3.36312e-43	N/A	N/A
structural_annotation	UHGV-0041335_10	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_11	phrog_172	113.2	3.2e-33	head scaffolding protein	head and packaging
UniRef90	UHGV-0041335_11	UniRef90_UPI000B68655F	315.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041335_11	1140002.I570_02913	70.5	0.00000000000406	N/A	N/A
Pfam	UHGV-0041335_11	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0041335_11	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_12	phrog_115	248.0	0	minor head protein	head and packaging
UniRef90	UHGV-0041335_12	UniRef90_A0A7H4KH56	571.0	0	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-0041335_12	201846.B5SP29_9CAUD	205.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0041335_12	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0041335_12	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-0041335_12	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_13	phrog_64	404.4	0	portal protein	head and packaging
UniRef90	UHGV-0041335_13	UniRef90_A0A7H4KH55	862.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0041335_13	1139219.I569_01383	407.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0041335_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0041335_13	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0041335_13	PF05133,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0041335_14	K06909	153.2	2.8026e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0041335_14	phrog_6672	172.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0041335_14	UniRef90_S0K156	201.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0041335_14	1139219.I569_01384	201.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0041335_14	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0041335_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0041335_14	PF17288,TIGR01547,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_16	phrog_314	91.3	7.8e-27	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_16	UniRef90_S1NAK7	236.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-0041335_16	1139219.I569_01385	236.0	0	NUMOD3 motif (2 copies)	N/A
Pfam	UHGV-0041335_16	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0041335_16	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-0041335_16	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0041335_16	PF19835,PF07460,TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0041335_17	K06909	214.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0041335_17	phrog_3717	269.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0041335_17	UniRef90_UPI0002A28D93	527.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0041335_17	1139219.I569_01386	365.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0041335_17	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0041335_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0041335_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0041335_17	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_24	phrog_7446	93.1	1.8e-27	N/A	unknown function
UniRef90	UHGV-0041335_24	UniRef90_T2F814	97.8	9.68e-26	Phage-related protein	N/A
PHROG	UHGV-0041335_25	phrog_2538	66.1	6e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0041335_25	UniRef90_A0A6N7BU85	77.8	5.92e-16	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0041335_25	1139219.I569_01387	72.4	0.0000000000000135	Helix-turn-helix of insertion element transposase	N/A
PHROG	UHGV-0041335_27	phrog_59	125.6	2.5e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_27	UniRef90_UPI001A9A6DC5	141.0	1.76e-39	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0041335_27	1423814.HMPREF0549_1779	121.0	1.14e-31	NUMOD4 motif	N/A
PADLOC	UHGV-0041335_27	HEase_00016	109.8	4.1e-32	homing endonuclease	RM
Pfam	UHGV-0041335_27	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0041335_27	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0041335_27	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_28	phrog_704	227.0	0	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_28	UniRef90_A0A7T4G856	240.0	0	Metallophosphoesterase	N/A
eggNOG-mapper	UHGV-0041335_28	1154757.Q5C_03075	218.0	0	N/A	N/A
structural_annotation	UHGV-0041335_28	PF12850,MF_00905,NF008359,COG2908	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041335_32	PF07870,NF011893,COG3461	N/A	N/A	N/A	N/A
KOfam	UHGV-0041335_33	K01160	42.3	0.000000000019	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0041335_33	phrog_1682	78.8	9.1e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_33	UniRef90_A0A7H4KH39	250.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0041335_33	220668.lp_2433	125.0	2.38e-35	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0041335_33	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0041335_33	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0041335_36	K03111	110.2	3.4e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0041335_36	phrog_44	122.4	4e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_36	UniRef90_A0A7H4KH37	270.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0041335_36	663278.Ethha_2440	100.0	4.51e-25	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0041335_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0041335_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0041335_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0041335_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0041335_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0041335_46	K02314	185.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0041335_46	phrog_19	195.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_46	UniRef90_A0A7H4KH28	848.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0041335_46	1158604.I591_01788	198.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-0041335_46	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0041335_46	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0041335_46	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_47	phrog_270	184.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_47	UniRef90_UPI00032E2207	476.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0041335_47	862514.HMPREF0623_0270	149.0	4.94e-41	Helix-turn-helix domain	N/A
Pfam	UHGV-0041335_47	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0041335_47	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0041335_47	PF13730,MF_01909,NF040939,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_48	phrog_398	216.7	0	N/A	unknown function
UniRef90	UHGV-0041335_48	UniRef90_UPI000CF02DAF	366.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0041335_48	945021.TEH_18380	238.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0041335_48	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0041335_48	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_49	phrog_2324	183.4	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_49	UniRef90_A0A7H4KH25	378.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0041335_49	985762.SAGN_05945	167.0	0	ERF superfamily	N/A
Pfam	UHGV-0041335_49	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0041335_49	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0041335_64	UniRef90_UPI0003305021	92.0	5.37e-23	helix-turn-helix domain-containing protein	N/A
KOfam	UHGV-0041335_65	K22300	66.7	5.6e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0041335_65	phrog_8	71.4	1.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0041335_65	UniRef90_A0A7H4KH10	149.0	1.4013e-45	Transcriptional repressor DicA	N/A
eggNOG-mapper	UHGV-0041335_65	1314.HKU360_01262	78.2	1.76e-16	Peptidase S24-like	N/A
Pfam	UHGV-0041335_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0041335_65	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0041335_66	K06400	365.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0041335_66	phrog_95	355.4	0	integrase	integration and excision
UniRef90	UHGV-0041335_66	UniRef90_A0A7H4KH09	847.0	0	Resolvase family site-specific recombinase	N/A
eggNOG-mapper	UHGV-0041335_66	1486428.A0A097BY75_9CAUD	315.0	0	Recombinase	N/A
Pfam	UHGV-0041335_66	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0041335_66	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0041335_66	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
structural_annotation	UHGV-0041335_66	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0041335_69	phrog_8660	76.3	5.2e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041335_69	UniRef90_A0A7H4KK18	232.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0041335_69	861530.ALOZ01000074_gene957	63.5	0.00000000016	HNH endonuclease	N/A
Pfam	UHGV-0041335_69	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0041335_69	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0041335_73	K01182	196.1	0	IMA, malL; oligo-1,6-glucosidase [EC:3.2.1.10]	N/A
UniRef90	UHGV-0041335_73	UniRef90_A0A3C2CVP7	162.0	1.4013e-45	Glucohydrolase (Fragment)	N/A
eggNOG-mapper	UHGV-0041335_73	1121105.ATXL01000016_gene1665	189.0	0	Alpha-amylase domain	N/A
PADLOC	UHGV-0041335_73	shah_acc_0214	105.3	9.3e-31	GlgB	CRISPR-CAS
Pfam	UHGV-0041335_73	PF00128	N/A	N/A	Alpha amylase, catalytic domain	Alpha-amylase
COG	UHGV-0041335_73	COG0366	N/A	N/A	Glycosidase/amylase (phosphorylase)	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0041335	Yes	31,433	41	68	1