Viral OTU vOTU-143360

vOTU: vOTU-143360

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-143360
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vOTU-143360
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes shahii
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0079506
Biosample ID	SAMEA2784500
Length	33,419 bps
CheckV Completeness	78.18% (Medium-quality)
CDS Count	47
CDS Density	96.14%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0079506_2	phrog_24616	52.1	0.0000000000000029	N/A	unknown function
eggNOG-mapper	UHGV-0079506_2	742767.HMPREF9456_03361	62.0	0.00000000173	N/A	N/A
structural_annotation	UHGV-0079506_2	PF20459	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_3	phrog_11226	290.1	0	portal protein	head and packaging
UniRef90	UHGV-0079506_3	UniRef90_A0A1V5IXK9	365.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0079506_3	762984.HMPREF9445_00183	248.0	0	N/A	N/A
structural_annotation	UHGV-0079506_3	PF04860,MF_04135,TIGR01540,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_5	phrog_21217	82.1	7.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0079506_5	1122931.AUAE01000005_gene3255	73.2	0.00000000000019	N/A	N/A
PHROG	UHGV-0079506_6	phrog_38780	186.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0079506_6	742767.HMPREF9456_03365	186.0	0	N/A	N/A
structural_annotation	UHGV-0079506_6	PF05065,MF_04119,NF033394,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0079506_7	K01358	110.4	2.3e-32	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0079506_7	phrog_94	118.6	8.4e-35	head maturation protease	head and packaging
UniRef90	UHGV-0079506_7	UniRef90_K1U006	245.0	0	Peptidase S14, ClpP	N/A
eggNOG-mapper	UHGV-0079506_7	1121289.JHVL01000006_gene2869	71.6	0.00000000000816	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	N/A
Pfam	UHGV-0079506_7	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0079506_7	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0079506_7	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_8	phrog_25337	59.7	2.3e-17	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0079506_8	657309.BXY_08300	81.3	0.00000000000154	Phage-related minor tail protein	N/A
COG	UHGV-0079506_8	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0079506_9	1406840.Q763_17235	101.0	4.39e-19	N/A	N/A
structural_annotation	UHGV-0079506_10	PF05632,PF17789,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_11	phrog_31246	40.6	9.4e-18	N/A	unknown function
UniRef90	UHGV-0079506_11	UniRef90_F3PDW2	70.9	0.00000000000155	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0079506_11	1122931.AUAE01000005_gene3263	89.0	2.26e-20	N/A	N/A
PHROG	UHGV-0079506_14	phrog_38	310.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0079506_14	UniRef90_A0A4Y1WYI8	626.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0079506_14	1033732.CAHI01000018_gene205	635.0	0	domain protein	N/A
Pfam	UHGV-0079506_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0079506_14	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0079506_14	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079506_14	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_15	phrog_606	64.0	2.8e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0079506_15	UniRef90_A0A4Y8KSK4	65.1	0.000000000381	DNA packaging protein	N/A
eggNOG-mapper	UHGV-0079506_15	762984.HMPREF9445_00166	60.5	0.00000000386	DNA-packaging protein gp3	N/A
Pfam	UHGV-0079506_15	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0079506_15	PF16677	N/A	N/A	N/A	N/A
Pfam	UHGV-0079506_16	PF08299	N/A	N/A	Bacterial dnaA protein helix-turn-helix	Bac_DnaA_C
COG	UHGV-0079506_16	COG0593	N/A	N/A	Chromosomal replication initiation ATPase DnaA	N/A
PHROG	UHGV-0079506_22	phrog_874	89.6	3.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0079506_22	1121098.HMPREF1534_01095	176.0	0	N/A	N/A
structural_annotation	UHGV-0079506_22	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_23	phrog_2776	47.8	0.00000000000021	N/A	unknown function
UniRef90	UHGV-0079506_23	UniRef90_UPI001297AEBA	283.0	0	MmcB family DNA repair protein	N/A
eggNOG-mapper	UHGV-0079506_23	1283340.Q6WI17_BPKVM	53.5	0.00000168	N/A	N/A
structural_annotation	UHGV-0079506_23	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_24	phrog_35741	91.1	1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0079506_24	445970.ALIPUT_01619	173.0	0	N/A	N/A
eggNOG-mapper	UHGV-0079506_28	1555202.A0A097EXG6_9CAUD	56.6	0.0000000096	N/A	N/A
KOfam	UHGV-0079506_30	K00558	191.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0079506_30	phrog_116	213.0	0	DNA methyltransferase	other
UniRef90	UHGV-0079506_30	UniRef90_UPI0018984E82	363.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0079506_30	1033733.CAEK01000007_gene1648	251.0	0	Cytosine-specific methyltransferase	N/A
PADLOC	UHGV-0079506_30	MTase_II_00058	197.4	0	Type II methyltransferase	RM
Pfam	UHGV-0079506_30	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0079506_30	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0079506_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0079506_30	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0079506_31	K00390	66.3	3.4e-32	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0079506_31	phrog_424	175.5	0	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0079506_31	UniRef90_A0A5B5VP29	562.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0079506_31	1121098.HMPREF1534_01084	417.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0079506_31	SspD_00001	64.8	1.8e-21	SspD	SSP
Pfam	UHGV-0079506_31	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0079506_31	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0079506_31	PF01507,MF_00063,NF002537,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_33	phrog_16304	79.4	5.5e-23	N/A	unknown function
UniRef90	UHGV-0079506_33	UniRef90_UPI001898327E	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0079506_33	694427.Palpr_2953	60.8	0.0000000495	N/A	N/A
Pfam	UHGV-0079506_33	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0079506_34	phrog_26490	153.3	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0079506_34	1268240.ATFI01000008_gene2557	140.0	2.87e-38	N/A	N/A
PHROG	UHGV-0079506_35	phrog_5034	107.3	1.4e-31	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079506_35	UniRef90_UPI0018AC7931	241.0	0	recombination protein NinG	N/A
eggNOG-mapper	UHGV-0079506_35	742725.HMPREF9450_02079	115.0	2.24e-31	N/A	N/A
Pfam	UHGV-0079506_35	PF05766	N/A	N/A	Bacteriophage Lambda NinG protein	NinG
COG	UHGV-0079506_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0079506_35	PF05766	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079506_36	UniRef90_UPI001897694A	100.0	1.67e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0079506_36	679935.Alfi_0472	97.4	6.49e-25	Helix-turn-helix domain	N/A
Pfam	UHGV-0079506_36	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0079506_36	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0079506_37	K10906	47.4	9.3e-20	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0079506_37	phrog_412	160.0	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079506_37	UniRef90_UPI0018A94F46	610.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0079506_37	1121101.HMPREF1532_02577	277.0	0	N/A	N/A
Pfam	UHGV-0079506_37	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-0079506_37	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0079506_38	phrog_14584	95.5	6.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0079506_38	1268240.ATFI01000008_gene2554	106.0	2.14e-27	N/A	N/A
Pfam	UHGV-0079506_41	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
UniRef90	UHGV-0079506_42	UniRef90_UPI00050A1875	154.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0079506_42	1235803.C825_03381	60.5	0.000000000652	helix_turn_helix, Lux Regulon	N/A
structural_annotation	UHGV-0079506_42	PF00196,COG2771	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079506_43	PF19555	N/A	N/A	N/A	N/A
KOfam	UHGV-0079506_44	K01356	47.6	0.00000000000034	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0079506_44	phrog_4	95.9	5.8e-28	transcriptional repressor	transcription regulation
UniRef90	UHGV-0079506_44	UniRef90_UPI0018AA411E	343.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0079506_44	1492737.FEM08_13630	82.8	2.02e-16	Peptidase S24-like	N/A
Pfam	UHGV-0079506_44	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
Pfam	UHGV-0079506_44	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0079506_44	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0079506_44	PF00717,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0079506_45	K07504	467.9	0	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-0079506_45	phrog_4225	443.8	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079506_45	UniRef90_UPI0018ABC42E	653.0	0	type I restriction endonuclease	N/A
eggNOG-mapper	UHGV-0079506_45	471854.Dfer_3124	422.0	0	Type I restriction enzyme R protein N terminus (HSDR_N)	N/A
Pfam	UHGV-0079506_45	PF04313	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
COG	UHGV-0079506_45	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079506_45	PF13588,TIGR04256,COG4748	N/A	N/A	N/A	N/A
KOfam	UHGV-0079506_47	K04763	84.1	2.5e-24	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0079506_47	phrog_1	101.7	7.8e-30	integrase	integration and excision
UniRef90	UHGV-0079506_47	UniRef90_R5UB18	611.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0079506_47	679935.Alfi_3042	611.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0079506_47	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0079506_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0079506_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0079506_47	PF00589,PF17293,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0079506	Yes	33,419	51	78	1