Viral OTU vOTU-150785

vOTU: vOTU-150785

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-150785
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00472 → vGENUS-00836 → vOTU-150785
Host Lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Ligilactobacillus → Ligilactobacillus ruminis
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0872199
Biosample ID	SAMEA3488580
Length	23,657 bps
CheckV Completeness	62.89% (Medium-quality)
CDS Count	28
CDS Density	90.02%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0872199_1	phrog_7331	97.1	6.8e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0872199_1	UniRef90_A0A7X2SSR5	258.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0872199_1	1605.Lani381_0386	267.0	0	Phage Terminase	N/A
Pfam	UHGV-0872199_1	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0872199_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
PHROG	UHGV-0872199_2	phrog_12	195.0	0	portal protein	head and packaging
UniRef90	UHGV-0872199_2	UniRef90_A0A1H7XX84	699.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0872199_2	1423755.BAML01000004_gene385	467.0	0	Phage portal protein	N/A
Pfam	UHGV-0872199_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0872199_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0872199_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0872199_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0872199_3	K01358	133.0	2.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0872199_3	phrog_94	230.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0872199_3	UniRef90_A0A1H7XXM5	427.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0872199_3	1423755.BAML01000004_gene384	200.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0872199_3	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0872199_3	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0872199_3	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_4	phrog_10	216.5	0	major head protein	head and packaging
UniRef90	UHGV-0872199_4	UniRef90_A0A1H7XWR2	749.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0872199_4	72638.Q9XJV7_9CAUD	471.0	0	peptidase activity	N/A
Pfam	UHGV-0872199_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0872199_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0872199_4	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_5	phrog_40	76.6	2.3e-22	head-tail adaptor Ad1	connector
UniRef90	UHGV-0872199_5	UniRef90_A0A062XE00	84.0	5.16e-19	Putative phage protein (Putative DNA packaging)	N/A
eggNOG-mapper	UHGV-0872199_5	1605.Lani381_0381	84.0	8.66e-20	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0872199_5	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0872199_5	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0872199_5	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0872199_6	UniRef90_A0A1H7XWN0	191.0	0	Phage head-tail adaptor, putative, SPP1 family	N/A
eggNOG-mapper	UHGV-0872199_6	1605.Lani381_0380	99.0	2.95e-25	Phage head-tail joining protein	N/A
Pfam	UHGV-0872199_6	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0872199_6	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0872199_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_7	phrog_5	42.4	0.000000000018	tail completion or Neck1 protein	connector
UniRef90	UHGV-0872199_7	UniRef90_A0A6F9XUV8	218.0	0	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0872199_7	1605.Lani381_0379	134.0	1.81e-38	N/A	N/A
Pfam	UHGV-0872199_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0872199_7	PF11114,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_8	phrog_1217	65.9	6.4e-19	tail protein	tail
UniRef90	UHGV-0872199_8	UniRef90_UPI00143DC793	112.0	1.06e-29	N/A	N/A
eggNOG-mapper	UHGV-0872199_8	1605.Lani381_0378	115.0	2.19e-31	N/A	N/A
structural_annotation	UHGV-0872199_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_9	phrog_88	111.3	7.2e-33	major tail protein	tail
UniRef90	UHGV-0872199_9	UniRef90_A0A1H7XYW7	366.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0872199_9	1605.Lani381_0377	201.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0872199_9	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0872199_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0872199_9	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_10	phrog_26915	47.2	0.00000000000011	N/A	unknown function
PHROG	UHGV-0872199_11	phrog_2629	51.8	0.0000000000000099	N/A	unknown function
PHROG	UHGV-0872199_12	phrog_167	228.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0872199_12	UniRef90_A0A1I2RKB2	701.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0872199_12	1605.Lani381_0374	414.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0872199_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0872199_12	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0872199_12	COG5283	N/A	N/A	Phage-related tail protein	N/A
KOfam	UHGV-0872199_14	K16476	42.2	0.0000000000026	NIN; ninein	N/A
PHROG	UHGV-0872199_14	phrog_167	477.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0872199_14	UniRef90_A0A1I2RJM6	1770.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0872199_14	37105.F8J1C3_9CAUD	304.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0872199_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-0872199_14	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
NCBIFam	UHGV-0872199_14	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-0872199_14	PF20155,TIGR01760,COG3953,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_15	phrog_33	47.1	0.00000000000021	distal tail protein Dit	tail
UniRef90	UHGV-0872199_15	UniRef90_A0A1K1KNS1	196.0	0	Prophage Lp1 protein 51	N/A
eggNOG-mapper	UHGV-0872199_15	1234679.BN424_2130	149.0	7.86969e-42	phage tail	N/A
COG	UHGV-0872199_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0872199_15	PF20195,PF21621,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0872199_16	K07273	104.1	1.2e-30	acm; lysozyme	N/A
PHROG	UHGV-0872199_16	phrog_3558	379.0	0	tail protein	tail
UniRef90	UHGV-0872199_16	UniRef90_F7R2Y6	1143.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0872199_16	1234679.BN424_2612	261.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0872199_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0872199_16	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
NCBIFam	UHGV-0872199_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0872199_16	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0872199_16	PF06605,PF01183,PF21683,MF_00729,TIGR01665,NF002575,COG4926,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_17	phrog_14448	59.7	3.4e-17	N/A	unknown function
UniRef90	UHGV-0872199_17	UniRef90_A0A8B5GZK2	106.0	5.09e-25	BppU_IgG domain-containing protein	N/A
eggNOG-mapper	UHGV-0872199_17	1234679.BN424_2128	92.0	2.6e-20	N/A	N/A
KOfam	UHGV-0872199_18	K16628	112.0	2.1e-33	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0872199_18	phrog_6320	116.5	1e-34	tail fiber protein	tail
UniRef90	UHGV-0872199_18	UniRef90_UPI001CDBB667	148.0	1.6e-40	collagen-like protein	N/A
Pfam	UHGV-0872199_18	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0872199_19	K16628	94.6	3.3e-28	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0872199_19	phrog_5073	86.3	6.6e-40	tail fiber protein	tail
UniRef90	UHGV-0872199_19	UniRef90_UPI001CDC1E23	98.2	3.88e-22	collagen-like protein	N/A
eggNOG-mapper	UHGV-0872199_19	1151292.QEW_0665	59.7	0.000000144	N/A	N/A
Pfam	UHGV-0872199_19	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0872199_21	phrog_1766	60.6	2.8e-17	tail fiber protein	tail
UniRef90	UHGV-0872199_22	UniRef90_A0A6A8GSS2	94.4	1.04e-24	XkdX family protein	N/A
Pfam	UHGV-0872199_22	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0872199_22	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0872199_23	phrog_1009	65.4	6.7e-19	N/A	unknown function
PHROG	UHGV-0872199_24	phrog_13404	52.7	0.0000000000000076	holin	lysis
UniRef90	UHGV-0872199_24	UniRef90_UPI001C035834	138.0	2.57993e-41	phage holin	N/A
eggNOG-mapper	UHGV-0872199_24	585506.HMPREF0877_0849	52.0	0.000000124	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0872199_24	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
COG	UHGV-0872199_24	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-0872199_25	K19220	143.8	1.49939e-42	cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]	N/A
PHROG	UHGV-0872199_25	phrog_291	199.8	0	endolysin	lysis
UniRef90	UHGV-0872199_25	UniRef90_UPI001C0299EF	702.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0872199_25	1069534.LRC_07430	682.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0872199_25	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0872199_25	PF01476	N/A	N/A	LysM domain	LysM
NCBIFam	UHGV-0872199_25	TIGR02899.1	N/A	N/A	SafA/ExsA family spore coat assembly protein	N/A
COG	UHGV-0872199_25	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0872199_25	PF01476,PF18697,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
KOfam	UHGV-0872199_26	K14059	179.8	0	int; integrase	N/A
PHROG	UHGV-0872199_26	phrog_1	191.2	0	integrase	integration and excision
UniRef90	UHGV-0872199_26	UniRef90_E7FPC8	774.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0872199_26	1423758.BN55_04135	237.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0872199_26	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0872199_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0872199_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0872199_26	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0872199_27	K22300	53.2	0.000000000000006	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0872199_27	phrog_8	73.5	3.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0872199_27	UniRef90_UPI00062CC06F	98.6	4.17e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0872199_27	1423724.BAMM01000020_gene1796	74.3	5.91e-16	transcriptional	N/A
PADLOC	UHGV-0872199_27	retron_type_VI_hth_cluster2_1	46.5	0.0000000000007	N/A	Retron
Pfam	UHGV-0872199_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0872199_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0872199_28	UniRef90_V7HTD9	300.0	0	Two-component response regulator	N/A
eggNOG-mapper	UHGV-0872199_28	1070319.CAGGBEG34_380012	64.3	0.00000000264	N/A	N/A
Pfam	UHGV-0872199_28	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0872199_28	PF01351,MF_00052_A,TIGR00729,COG1039	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0872199	Yes	23,657	44	63	1