Viral OTU vOTU-162000

vOTU: vOTU-162000

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-162000
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00316 → vGENUS-00408 → vOTU-162000
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger → Gemmiger qucibialis
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0440475
Biosample ID	N/A
Length	25,004 bps
CheckV Completeness	70.51% (Medium-quality)
CDS Count	38
CDS Density	93.82%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0440475_6	K22300	44.9	0.0000000000022	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0440475_6	phrog_8	44.8	0.0000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-0440475_6	UniRef90_A0A367GFH2	104.0	4.05e-28	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0440475_6	796942.HMPREF9623_01770	57.8	0.00000000608	N/A	N/A
Pfam	UHGV-0440475_6	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-0440475_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0440475_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0440475_7	K01356	145.1	7.30076e-43	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0440475_7	phrog_4	117.8	1.2e-34	transcriptional repressor	transcription regulation
UniRef90	UHGV-0440475_7	UniRef90_A0A1Q6T3E1	294.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0440475_7	411483.FAEPRAA2165_03041	171.0	0	N/A	N/A
Pfam	UHGV-0440475_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0440475_7	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0440475_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0440475_7	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_8	phrog_38135	69.2	4.1e-20	N/A	unknown function
UniRef90	UHGV-0440475_8	UniRef90_A0A1Q6T359	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-0440475_8	411471.SUBVAR_05869	73.9	0.000000000000737	repeat protein	N/A
Pfam	UHGV-0440475_8	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-0440475_8	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-0440475_8	PF14020	N/A	N/A	N/A	N/A
KOfam	UHGV-0440475_9	K01356	48.8	0.00000000000015	lexA; repressor LexA [EC:3.4.21.88]	N/A
eggNOG-mapper	UHGV-0440475_9	411473.RUMCAL_03095	51.2	0.00000096	N/A	N/A
Pfam	UHGV-0440475_9	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0440475_9	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-0440475_10	phrog_2158	194.3	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0440475_10	UniRef90_A0A410PX10	282.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-0440475_10	748224.HMPREF9436_01377	250.0	0	Abi-like protein	N/A
PADLOC	UHGV-0440475_10	AbiD	280.2	0	AbiD	Abi
Pfam	UHGV-0440475_10	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0440475_10	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0440475_10	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-0440475_11	K06400	363.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0440475_11	phrog_95	370.9	0	integrase	integration and excision
UniRef90	UHGV-0440475_11	UniRef90_UPI001D0F283A	614.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0440475_11	718252.FP2_01160	592.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0440475_11	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0440475_11	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0440475_11	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0440475_11	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0440475_11	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_12	phrog_1129	62.9	3.7e-18	holin	lysis
UniRef90	UHGV-0440475_12	UniRef90_A0A367FT42	166.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0440475_12	693746.OBV_13280	110.0	2.05e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0440475_12	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0440475_12	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_13	phrog_4105	100.8	7.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-0440475_13	657322.FPR_27220	148.0	5.60519e-45	N/A	N/A
KOfam	UHGV-0440475_14	K07273	182.6	0	acm; lysozyme	N/A
PHROG	UHGV-0440475_14	phrog_291	154.1	1.4013e-45	endolysin	lysis
UniRef90	UHGV-0440475_14	UniRef90_A0A367G061	519.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0440475_14	411471.SUBVAR_06927	318.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0440475_14	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0440475_14	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0440475_14	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0440475_14	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_15	phrog_6465	67.2	1.1e-20	tail protein	tail
eggNOG-mapper	UHGV-0440475_15	508419.F8J176_9CAUD	117.0	6.24e-27	peptidoglycan catabolic process	N/A
Pfam	UHGV-0440475_15	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
Pfam	UHGV-0440475_15	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
PHROG	UHGV-0440475_16	phrog_19111	51.8	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0440475_16	756499.Desde_3162	108.0	6.7e-24	nuclear chromosome segregation	N/A
COG	UHGV-0440475_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0440475_18	phrog_13589	182.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0440475_18	742733.HMPREF9469_05009	231.0	0	N/A	N/A
PHROG	UHGV-0440475_19	phrog_31538	47.1	0.00000000000042	N/A	unknown function
eggNOG-mapper	UHGV-0440475_19	428125.CLOLEP_01433	57.0	0.00000000229	N/A	N/A
structural_annotation	UHGV-0440475_20	PF12245	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_22	phrog_18444	79.4	2.7e-23	N/A	unknown function
UniRef90	UHGV-0440475_22	UniRef90_UPI0011788049	50.1	0.00000121	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0440475_22	1294142.CINTURNW_1707	58.9	0.0000000000598	N/A	N/A
PHROG	UHGV-0440475_23	phrog_18190	88.3	2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0440475_23	411471.SUBVAR_06932	306.0	0	N/A	N/A
structural_annotation	UHGV-0440475_23	PF05954,PF00629,PF03424,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_24	phrog_1194	43.9	0.0000000000032	N/A	unknown function
eggNOG-mapper	UHGV-0440475_24	411471.SUBVAR_06933	100.0	1.25e-25	N/A	N/A
structural_annotation	UHGV-0440475_24	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_25	phrog_6900	259.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0440475_25	UniRef90_A0A1C5MMN2	400.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0440475_25	1280698.AUJS01000007_gene1047	392.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0440475_25	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0440475_25	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_26	phrog_1633	70.3	9.1e-21	N/A	unknown function
UniRef90	UHGV-0440475_26	UniRef90_UPI000986795C	73.2	0.0000000000000253	N/A	N/A
eggNOG-mapper	UHGV-0440475_26	883110.HMPREF9260_00651	65.9	0.00000000000302	N/A	N/A
structural_annotation	UHGV-0440475_26	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_27	phrog_1526	81.5	7.8e-24	N/A	unknown function
UniRef90	UHGV-0440475_27	UniRef90_D2BQF7	67.8	0.000000000000607	N/A	N/A
eggNOG-mapper	UHGV-0440475_27	879308.HMPREF9130_1240	80.5	1.24e-18	N/A	N/A
PHROG	UHGV-0440475_28	phrog_117	181.6	0	major tail protein	tail
UniRef90	UHGV-0440475_28	UniRef90_A0A1Q6T308	234.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0440475_28	748224.HMPREF9436_00696	219.0	0	domain, Protein	N/A
COG	UHGV-0440475_28	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0440475_28	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_29	phrog_123	63.4	3.9e-18	tail terminator	connector
UniRef90	UHGV-0440475_29	UniRef90_A0A2A5RIK6	84.7	5.4e-19	N/A	N/A
eggNOG-mapper	UHGV-0440475_29	1231377.C426_1732	84.0	1.82e-19	N/A	N/A
structural_annotation	UHGV-0440475_29	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_30	phrog_387	62.6	5.3e-18	neck protein	connector
eggNOG-mapper	UHGV-0440475_30	748224.HMPREF9436_00694	95.9	7.71e-25	N/A	N/A
PHROG	UHGV-0440475_31	phrog_501	69.1	6.2e-20	head closure Hc1	connector
eggNOG-mapper	UHGV-0440475_31	748224.HMPREF9436_00693	171.0	0	N/A	N/A
structural_annotation	UHGV-0440475_31	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_32	phrog_137	55.4	8.1e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-0440475_32	UniRef90_E2ZGA8	158.0	0	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-0440475_32	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_34	phrog_10	139.1	3.80004e-41	major head protein	head and packaging
UniRef90	UHGV-0440475_34	UniRef90_A0A1Y4TJU9	517.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0440475_34	748224.HMPREF9436_00690	451.0	0	Phage capsid family	N/A
Pfam	UHGV-0440475_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0440475_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0440475_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0440475_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_35	phrog_194	80.8	2.2e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0440475_35	UniRef90_D4K444	156.0	2.8026e-45	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0440475_35	748224.HMPREF9436_03336	156.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0440475_35	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0440475_35	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_36	phrog_34144	67.8	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0440475_36	742742.HMPREF9452_00763	80.5	1.15e-19	N/A	N/A
structural_annotation	UHGV-0440475_36	PF20111	N/A	N/A	N/A	N/A
PHROG	UHGV-0440475_37	phrog_193	122.3	5.1e-36	head maturation protease	head and packaging
UniRef90	UHGV-0440475_37	UniRef90_A0A6N8H118	366.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0440475_37	748224.HMPREF9436_01469	403.0	0	N/A	N/A
COG	UHGV-0440475_37	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-0440475_38	phrog_104	201.9	0	portal protein	head and packaging
UniRef90	UHGV-0440475_38	UniRef90_A0A316PMS0	701.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0440475_38	748224.HMPREF9436_01468	718.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0440475_38	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0440475_38	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0440475	Yes	25,004	56	71	1