Viral OTU vOTU-164570

vOTU: vOTU-164570

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-164570
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-01969 → vGENUS-02224 → vOTU-164570
Host Lineage
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0212604
Biosample ID	SAMN09781779
Length	19,174 bps
CheckV Completeness	54.15% (Medium-quality)
CDS Count	38
CDS Density	94.52%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0212604_1	K22300	61.9	1.4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0212604_1	phrog_3	42.9	0.000000000019	transcriptional repressor	transcription regulation
UniRef90	UHGV-0212604_1	UniRef90_A0A417HG00	57.8	0.00000000134	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0212604_1	1449347.JQLN01000007_gene1083	53.5	0.000000205	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0212604_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0212604_1	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-0212604_2	UniRef90_R6MV99	53.5	0.0000000474	DNA binding domain protein excisionase family	N/A
eggNOG-mapper	UHGV-0212604_2	742723.HMPREF9477_00648	47.0	0.0000028	Helix-turn-helix domain	N/A
Pfam	UHGV-0212604_2	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0212604_2	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
PHROG	UHGV-0212604_5	phrog_8	63.7	4.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0212604_5	UniRef90_A0A845R317	88.2	1.55e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0212604_5	1378168.N510_02302	88.2	2.6e-22	Transcriptional	N/A
Pfam	UHGV-0212604_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0212604_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0212604_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0212604_6	K07729	47.5	0.00000000000037	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0212604_6	UniRef90_A0A316PEB9	61.6	0.000000000036	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0212604_6	469609.HMPREF0847_01976	49.7	0.000000285	Transcriptional regulator	N/A
Pfam	UHGV-0212604_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0212604_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0212604_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_11	phrog_659	183.4	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212604_11	UniRef90_UPI000691FB66	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0212604_11	1507.HMPREF0262_00431	201.0	0	N/A	N/A
Pfam	UHGV-0212604_11	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0212604_11	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_12	phrog_72	61.7	9.3e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212604_12	UniRef90_A0A8D9PDS2	129.0	6.93e-35	NinB protein	N/A
eggNOG-mapper	UHGV-0212604_12	1507.HMPREF0262_00432	104.0	8.81e-26	N/A	N/A
structural_annotation	UHGV-0212604_12	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_13	phrog_16304	53.2	0.0000000000000044	N/A	unknown function
eggNOG-mapper	UHGV-0212604_13	1105031.HMPREF1141_0552	51.2	0.00000961	N/A	N/A
Pfam	UHGV-0212604_13	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0212604_13	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_14	phrog_9804	122.0	4.3e-36	N/A	unknown function
UniRef90	UHGV-0212604_14	UniRef90_A0A448W1P6	112.0	1.9e-27	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0212604_14	1410650.JHWL01000003_gene2847	88.2	3.22e-19	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0212604_14	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
KOfam	UHGV-0212604_16	K01160	63.3	6.6e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0212604_16	phrog_140	84.8	1.2e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212604_16	UniRef90_W0FHJ5	108.0	6.21e-28	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0212604_16	1278311.AUAL01000001_gene43	101.0	8.69e-26	crossover junction endodeoxyribonuclease activity	N/A
Pfam	UHGV-0212604_16	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0212604_16	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0212604_16	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0212604_17	K03111	146.9	2.00386e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0212604_17	phrog_44	145.2	3.60134e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212604_17	UniRef90_A0A2V2FR21	142.0	6.14007e-41	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0212604_17	913865.DOT_1298	140.0	4.24005e-41	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0212604_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0212604_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0212604_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0212604_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0212604_17	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_20	phrog_20532	54.8	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0212604_20	411470.RUMGNA_02189	62.0	0.00000000352	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
COG	UHGV-0212604_20	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
PHROG	UHGV-0212604_21	phrog_23490	67.4	9.1e-20	N/A	unknown function
NCBIFam	UHGV-0212604_21	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
PHROG	UHGV-0212604_26	phrog_36	47.3	0.00000000000042	transcriptional regulator	transcription regulation
COG	UHGV-0212604_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0212604_26	PF04545,MF_00674,TIGR02980,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-0212604_29	K07319	119.7	2.8e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0212604_29	phrog_498	402.1	0	DNA methyltransferase	other
UniRef90	UHGV-0212604_29	UniRef90_R5AIZ8	462.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0212604_29	1423758.BN55_01455	421.0	0	DNA methylase	N/A
PADLOC	UHGV-0212604_29	MTase_II_00015	219.9	0	Type II methyltransferase	RM
Pfam	UHGV-0212604_29	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0212604_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0212604_29	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0212604_29	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0212604_31	K06909	116.2	3.4e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0212604_31	phrog_2	113.1	4.3e-33	terminase large subunit	head and packaging
UniRef90	UHGV-0212604_31	UniRef90_A0A2V2F595	523.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0212604_31	642492.Clole_0814	393.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0212604_31	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0212604_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0212604_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0212604_31	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_32	phrog_533	397.0	0	portal protein	head and packaging
UniRef90	UHGV-0212604_32	UniRef90_UPI000C8223FC	589.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0212604_32	428125.CLOLEP_01803	573.0	0	N/A	N/A
Pfam	UHGV-0212604_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0212604_32	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0212604_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_33	phrog_581	266.1	0	minor head protein	head and packaging
UniRef90	UHGV-0212604_33	UniRef90_A7VTB0	313.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0212604_33	428125.CLOLEP_01802	313.0	0	N/A	N/A
Pfam	UHGV-0212604_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0212604_33	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0212604_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0212604_33	PF06152	N/A	N/A	N/A	N/A
COG	UHGV-0212604_36	COG0783	N/A	N/A	DNA-binding ferritin-like protein (oxidative damage protectant)	N/A
structural_annotation	UHGV-0212604_36	PF14530,MF_01441,NF009990,COG0783	N/A	N/A	N/A	N/A
PHROG	UHGV-0212604_38	phrog_422	262.1	0	major head protein	head and packaging
UniRef90	UHGV-0212604_38	UniRef90_A0A316T938	317.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0212604_38	428125.CLOLEP_00183	335.0	0	COG NOG28280 non supervised orthologous group	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0212604	Yes	19,174	56	54	1