Viral OTU vOTU-165350

vOTU: vOTU-165350

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-165350
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00559 → vOTU-165350
Host Lineage
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1513169
Biosample ID	N/A
Length	69,883 bps
CheckV Completeness	67.09% (Medium-quality)
CDS Count	104
CDS Density	90.65%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-1513169_1	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-1513169_5	K03547	97.2	3e-28	sbcD, mre11; DNA repair protein SbcD/Mre11	N/A
PHROG	UHGV-1513169_5	phrog_77	162.0	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513169_5	UniRef90_A0A843HAQ1	571.0	0	Metallophosphoesterase family protein	N/A
eggNOG-mapper	UHGV-1513169_5	1071679.BG57_13905	111.0	5.74e-22	ATPase involved in DNA repair	N/A
Pfam	UHGV-1513169_5	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1513169_5	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
KOfam	UHGV-1513169_11	K01520	102.2	6.1e-30	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1513169_11	phrog_135	103.4	2e-30	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513169_11	UniRef90_A0A2E7WA62	127.0	2.32e-34	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1513169_11	1121124.JNIX01000014_gene1237	86.7	2.65e-19	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1513169_11	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1513169_11	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1513169_11	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-1513169_13	K03111	88.2	1.6e-25	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1513169_13	phrog_44	99.7	3.8e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513169_13	UniRef90_A0A351YVW4	99.4	1.32e-23	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1513169_13	221027.JO40_10795	95.1	1.18e-22	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1513169_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1513169_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1513169_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1513169_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
KOfam	UHGV-1513169_14	K06223	138.1	8.5e-41	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1513169_14	phrog_56	145.6	3.9937e-43	DNA methyltransferase	other
UniRef90	UHGV-1513169_14	UniRef90_A0A1T4QYH4	308.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-1513169_14	869209.Tresu_0668	304.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1513169_14	MTase_II_00073	339.1	0	Type II methyltransferase	RM
Pfam	UHGV-1513169_14	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
NCBIFam	UHGV-1513169_14	TIGR00571.1	N/A	N/A	Dam family site-specific DNA-(adenine-N6)-methyltransferase	N/A
COG	UHGV-1513169_14	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1513169_14	PF02086,TIGR00571,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_16	phrog_8	45.8	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1513169_16	UniRef90_A0A090Z974	60.5	0.00000000244	Helix-turn-helix family protein	N/A
eggNOG-mapper	UHGV-1513169_16	1121864.OMO_02129	53.9	0.0000000962	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1513169_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1513169_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1513169_17	K14059	163.8	0	int; integrase	N/A
PHROG	UHGV-1513169_17	phrog_1	149.1	3.64338e-44	integrase	integration and excision
UniRef90	UHGV-1513169_17	UniRef90_UPI001652177F	333.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1513169_17	545695.TREAZ_1073	164.0	2.46629e-43	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1513169_17	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1513169_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1513169_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1513169_17	PF00589,PF13102,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513169_18	UniRef90_A0A538G9Z1	49.7	0.00000394	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1513169_18	877418.ATWV01000001_gene1495	49.7	0.00000707	DNA-binding protein PTS system, IIA component	N/A
Pfam	UHGV-1513169_18	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1513169_18	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-1513169_18	COG1762	N/A	N/A	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)	N/A
COG	UHGV-1513169_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1513169_21	K02315	112.2	5.3e-33	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1513169_21	phrog_50	98.7	7e-29	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513169_21	UniRef90_UPI001EF51E15	83.2	1.96e-16	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1513169_21	1123504.JQKD01000029_gene4239	79.3	0.00000000000000408	IstB-like ATP binding protein	N/A
Pfam	UHGV-1513169_21	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1513169_21	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
KOfam	UHGV-1513169_22	K02314	288.0	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1513169_22	phrog_19	258.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513169_22	UniRef90_A0A841RBF9	222.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-1513169_22	1123274.KB899412_gene1512	218.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1513169_22	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1513169_22	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1513169_22	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1513169_22	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_27	phrog_625	42.4	0.0000000000064	N/A	unknown function
Pfam	UHGV-1513169_27	PF04266	N/A	N/A	ASCH domain	ASCH
PHROG	UHGV-1513169_31	phrog_2302	46.0	0.00000000000059	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1513169_31	1408437.JNJN01000030_gene1070	66.2	0.00000000000455	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1513169_31	COG3969	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_34	phrog_6721	229.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1513169_34	1235802.C823_04642	270.0	0	N/A	N/A
structural_annotation	UHGV-1513169_34	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_35	phrog_799	158.8	0	DNA methyltransferase	other
UniRef90	UHGV-1513169_35	UniRef90_UPI001CF17500	199.0	0	class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-1513169_35	1434319.W5RVC2_9CAUD	184.0	0	methyltransferase activity	N/A
Pfam	UHGV-1513169_35	PF13651	N/A	N/A	Adenine-specific methyltransferase EcoRI	EcoRI_methylase
structural_annotation	UHGV-1513169_35	PF19587,MF_01872,NF011489,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-1513169_37	K00571	152.6	2.8026e-45	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1513169_37	phrog_67	130.1	4.00001e-41	DNA methyltransferase	other
UniRef90	UHGV-1513169_37	UniRef90_A0A843GZ96	312.0	0	Type II methyltransferase	N/A
eggNOG-mapper	UHGV-1513169_37	877240.E1AC06_9CAUD	150.0	4.01052e-42	helicase activity	N/A
PADLOC	UHGV-1513169_37	MTase_II_00157	126.2	3.2e-38	Type II methyltransferase	RM
Pfam	UHGV-1513169_37	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1513169_37	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513169_40	UniRef90_R5P8N9	180.0	0	Putative membrane protein	N/A
eggNOG-mapper	UHGV-1513169_40	744872.Spica_1005	109.0	8.21e-27	N/A	N/A
structural_annotation	UHGV-1513169_40	PF10277	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_42	phrog_144	44.5	0.0000000000031	HNH endonuclease	DNA, RNA and nucleotide metabolism
PHROG	UHGV-1513169_46	phrog_26752	183.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1513169_46	1125725.HMPREF1325_1827	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513169_47	585394.RHOM_09370	48.1	0.00000184	Transcriptional regulator	N/A
Pfam	UHGV-1513169_47	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1513169_47	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
PHROG	UHGV-1513169_50	phrog_16490	61.2	6.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1513169_50	476272.RUMHYD_01770	73.9	0.000000000000132	N/A	N/A
UniRef90	UHGV-1513169_60	UniRef90_UPI0011C995FD	210.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1513169_62	1415774.U728_3405	80.9	0.000000000000416	N/A	N/A
PHROG	UHGV-1513169_65	phrog_31	82.9	2.8e-24	baseplate hub protein Tal	tail
eggNOG-mapper	UHGV-1513169_65	1502851.FG93_01933	61.6	0.00000437	COG4733 Phage-related protein, tail component	N/A
COG	UHGV-1513169_65	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
KOfam	UHGV-1513169_66	K13695	74.3	1.6e-21	nlpC; probable lipoprotein NlpC	N/A
PHROG	UHGV-1513169_66	phrog_329	61.7	8.7e-18	minor tail protein	tail
UniRef90	UHGV-1513169_66	UniRef90_A0A1H9ATU7	73.2	0.0000000000000475	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-1513169_66	1120971.AUCA01000002_gene1496	67.8	0.00000000000528	Protein conserved in bacteria	N/A
Pfam	UHGV-1513169_66	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-1513169_66	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1513169_66	PF00877,NF008096,COG0791	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513169_67	UniRef90_A0A843HAS7	151.0	1.8357e-43	N/A	N/A
KOfam	UHGV-1513169_69	K20361	46.6	0.0000000000000087	USO1; intracellular protein transport protein USO1	N/A
PHROG	UHGV-1513169_69	phrog_9959	96.7	1.4e-28	tail length tape measure protein	tail
UniRef90	UHGV-1513169_69	UniRef90_A0A843H854	293.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1513169_69	1358423.N180_02740	99.8	2.52e-18	tape measure	N/A
Pfam	UHGV-1513169_69	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1513169_69	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1513169_69	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1513169_71	phrog_313	43.7	0.0000000000041	Tail assembly chaperone	tail
PHROG	UHGV-1513169_72	phrog_290	63.9	2.6e-31	minor tail protein	tail
eggNOG-mapper	UHGV-1513169_72	1111728.ATYS01000002_gene2174	57.8	0.0000028	domain, Protein	N/A
Pfam	UHGV-1513169_72	PF18906	N/A	N/A	Phage tail tube protein	Phage_tube_2
COG	UHGV-1513169_72	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_73	phrog_179	45.0	0.0000000000018	tail terminator	connector
Pfam	UHGV-1513169_73	PF13554	N/A	N/A	N/A	DUF4128
structural_annotation	UHGV-1513169_73	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_75	phrog_161	66.0	6.7e-19	head closure Hc1	connector
structural_annotation	UHGV-1513169_75	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_76	phrog_477	142.3	1.80067e-42	head-tail adaptor Ad1	connector
eggNOG-mapper	UHGV-1513169_76	1300345.LF41_2436	85.1	9.87e-18	N/A	N/A
Pfam	UHGV-1513169_76	PF20557	N/A	N/A	Putative DnaT-like ssDNA binding protein	DnaT_2
PHROG	UHGV-1513169_78	phrog_283	233.7	0	major head protein	head and packaging
UniRef90	UHGV-1513169_78	UniRef90_A0A5M6IN27	261.0	0	P22 coat-protein 5 family protein	N/A
eggNOG-mapper	UHGV-1513169_78	1335760.ASTG01000033_gene47	261.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-1513169_78	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-1513169_78	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_79	phrog_206	44.4	0.0000000000026	head scaffolding protein	head and packaging
PHROG	UHGV-1513169_80	phrog_241	95.4	1.4e-29	head morphogenesis	head and packaging
UniRef90	UHGV-1513169_80	UniRef90_UPI0010C10E53	77.4	0.0000000000015	minor capsid protein	N/A
eggNOG-mapper	UHGV-1513169_80	744979.R2A130_3465	71.6	0.0000000000268	Phage Mu protein F like protein	N/A
Pfam	UHGV-1513169_80	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1513169_80	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1513169_80	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1513169_81	phrog_145	391.3	0	portal protein	head and packaging
UniRef90	UHGV-1513169_81	UniRef90_A0A843H903	429.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513169_81	257310.BB2215	239.0	0	to Bacteriophage MB78 60 kDa protein gp62 SWALL Q9T0Q3 (EMBL Y19202) (540 aa) fasta scores E() 2.1e-31, 31.2 id in 455 aa	N/A
Pfam	UHGV-1513169_81	PF13264	N/A	N/A	N/A	DUF4055
structural_annotation	UHGV-1513169_81	PF05133,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1513169_82	K06909	114.0	1.5e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1513169_82	phrog_2	128.8	6.5e-38	terminase large subunit	head and packaging
UniRef90	UHGV-1513169_82	UniRef90_A0A843H313	403.0	0	Terminase family protein	N/A
eggNOG-mapper	UHGV-1513169_82	1547445.LO80_03300	230.0	0	Terminase-like family	N/A
Pfam	UHGV-1513169_82	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1513169_82	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1513169_82	PF03237,PF17289,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-1513169_84	K07727	48.2	0.00000000000025	K07727; putative transcriptional regulator	N/A
Pfam	UHGV-1513169_84	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1513169_84	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
Pfam	UHGV-1513169_85	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-1513169_85	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1513169_85	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1513169_86	phrog_8	58.4	3e-18	transcriptional regulator	transcription regulation
Pfam	UHGV-1513169_86	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-1513169_86	PF01381	N/A	N/A	Helix-turn-helix	HTH_3

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1513169	Yes	69,883	37	67	1