Viral OTU vOTU-165472

vOTU: vOTU-165472

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-165472
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-02060 → vGENUS-10806 → vOTU-165472
Host Lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Ligilactobacillus → Ligilactobacillus salivarius
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1356311
Biosample ID	N/A
Length	24,867 bps
CheckV Completeness	63.77% (Medium-quality)
CDS Count	30
CDS Density	95.08%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1356311_1	phrog_1313	440.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356311_1	UniRef90_A0A0F7PSG7	811.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1356311_1	1423755.BAML01000004_gene401	800.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1356311_1	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1356311_1	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1356311_1	PF05272,MF_04000,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_2	phrog_5702	91.3	2.3e-27	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356311_2	UniRef90_A0A0R1WR99	202.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1356311_2	1423755.BAML01000004_gene400	201.0	0	VRR_NUC	N/A
Pfam	UHGV-1356311_2	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1356311_2	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_5	phrog_2044	80.8	1e-23	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356311_5	UniRef90_A0A379B138	61.6	0.000000000116	EAL domain-containing protein	N/A
eggNOG-mapper	UHGV-1356311_5	999413.HMPREF1094_00228	64.7	0.00000000000139	N/A	N/A
structural_annotation	UHGV-1356311_5	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_6	phrog_1891	139.8	8.00141e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356311_6	UniRef90_A0A2G4RJF6	318.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1356311_6	243275.TDE_1153	99.8	1.24e-23	HNH endonuclease	N/A
Pfam	UHGV-1356311_6	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1356311_6	PF13392	N/A	N/A	N/A	N/A
KOfam	UHGV-1356311_7	K14059	144.2	1.49939e-42	int; integrase	N/A
PHROG	UHGV-1356311_7	phrog_1	153.3	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-1356311_7	UniRef90_A0A2G4RJ91	620.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1356311_7	1293597.BN147_00195	224.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1356311_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1356311_7	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1356311_7	PF00589,PF14659,MF_02055,NF001399,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1356311_9	K14059	183.2	0	int; integrase	N/A
PHROG	UHGV-1356311_9	phrog_1	187.0	0	integrase	integration and excision
UniRef90	UHGV-1356311_9	UniRef90_A0A1D7TSR4	623.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1356311_9	862971.SANR_1128	425.0	0	Phage integrase family	N/A
Pfam	UHGV-1356311_9	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1356311_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1356311_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1356311_9	PF00589,PF14659,MF_02055,NF001399,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1356311_10	K03427	40.1	0.000000000037	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1356311_10	phrog_1071	286.6	0	DNA methyltransferase	other
UniRef90	UHGV-1356311_10	UniRef90_A0JQK7	416.0	0	N6_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1356311_10	349123.Lreu23DRAFT_3890	269.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-1356311_10	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1356311_10	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1356311_10	PF01596,TIGR02469,COG3963	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_11	phrog_36988	225.8	0	N/A	unknown function
UniRef90	UHGV-1356311_11	UniRef90_A0A1D7TSQ1	178.0	0	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1356311_11	PF08667,MF_00535,NF010465,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_12	phrog_28363	114.4	3.4e-34	N/A	unknown function
PHROG	UHGV-1356311_13	phrog_248	87.3	2e-25	transcriptional activator	transcription regulation
UniRef90	UHGV-1356311_13	UniRef90_A0A5Q2P2B6	69.3	0.00000000000288	N/A	N/A
eggNOG-mapper	UHGV-1356311_13	936140.AEOT01000013_gene382	74.3	0.00000000000000646	Phage transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-1356311_13	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1356311_13	PF07374,TIGR01637	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_14	phrog_20177	87.7	8.4e-26	N/A	unknown function
PHROG	UHGV-1356311_15	phrog_7344	167.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-1356311_15	UniRef90_V6DPA4	293.0	0	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1356311_15	1423755.BAML01000009_gene780	112.0	9.18e-30	N/A	N/A
Pfam	UHGV-1356311_15	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-1356311_15	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-1356311_16	K06909	256.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1356311_16	phrog_3717	133.5	1.1e-39	terminase large subunit	head and packaging
UniRef90	UHGV-1356311_16	UniRef90_A0A2G4RJU8	895.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1356311_16	1158601.I585_00701	588.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-1356311_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1356311_16	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1356311_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1356311_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1356311_16	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_17	phrog_533	582.7	0	portal protein	head and packaging
UniRef90	UHGV-1356311_17	UniRef90_V6DN92	978.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1356311_17	1399941.U3PCP8_9CAUD	511.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1356311_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1356311_17	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1356311_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_18	phrog_581	361.3	0	minor head protein	head and packaging
UniRef90	UHGV-1356311_18	UniRef90_UPI001368C258	717.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1356311_18	1140001.I571_02107	343.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1356311_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1356311_18	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_19	phrog_194	167.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1356311_19	UniRef90_UPI001F504DE4	336.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1356311_19	169963.lmo2297	130.0	1.36e-35	Phage minor structural protein GP20	N/A
Pfam	UHGV-1356311_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1356311_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_20	phrog_422	252.6	0	major head protein	head and packaging
UniRef90	UHGV-1356311_20	UniRef90_A0A1V9TMB5	561.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1356311_20	1399941.U3PDP8_9CAUD	358.0	0	T=7 icosahedral viral capsid	N/A
structural_annotation	UHGV-1356311_20	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_21	phrog_541	104.8	5.6e-31	head-tail adaptor	connector
UniRef90	UHGV-1356311_21	UniRef90_A0A0B8QYX3	70.1	0.000000000000713	Coenzyme F420-reducing hydrogenase, beta subunit	N/A
eggNOG-mapper	UHGV-1356311_21	1399941.U3PCQ2_9CAUD	73.6	0.0000000000000075	N/A	N/A
PHROG	UHGV-1356311_22	phrog_793	112.2	2.7e-33	head-tail adaptor	connector
UniRef90	UHGV-1356311_22	UniRef90_A0A317GI63	172.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1356311_22	1140001.I571_02112	133.0	7.87e-39	Minor capsid protein	N/A
Pfam	UHGV-1356311_22	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1356311_22	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_23	phrog_556	79.8	2.7e-23	minor head protein	head and packaging
UniRef90	UHGV-1356311_23	UniRef90_A0A2G4RJU6	266.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1356311_23	1158601.I585_00692	86.3	3.3e-20	Minor capsid protein	N/A
Pfam	UHGV-1356311_23	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1356311_23	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_24	phrog_913	122.3	2.3e-36	minor head protein	head and packaging
UniRef90	UHGV-1356311_24	UniRef90_V6DPB3	219.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1356311_24	1158601.I585_01152	85.5	1.56e-19	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1356311_24	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1356311_24	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_25	phrog_820	191.1	0	major tail protein	tail
UniRef90	UHGV-1356311_25	UniRef90_V6DL71	336.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1356311_25	1140001.I571_02115	161.0	0	domain, Protein	N/A
COG	UHGV-1356311_25	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356311_25	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_26	phrog_10257	154.5	0	minor head protein	head and packaging
eggNOG-mapper	UHGV-1356311_26	1158601.I585_00688	51.6	0.00000329	N/A	N/A
structural_annotation	UHGV-1356311_26	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_27	phrog_706	197.1	0	N/A	unknown function
UniRef90	UHGV-1356311_27	UniRef90_V6DLF3	385.0	0	N/A	N/A
eggNOG-mapper	UHGV-1356311_27	52979.O03936_9CAUD	162.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1356311_27	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1356311_27	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_28	phrog_167	645.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1356311_28	UniRef90_A0A2G4RJV7	1901.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1356311_28	1423755.BAML01000004_gene374	392.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-1356311_28	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1356311_28	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1356311_28	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1356311_28	PF10145,TIGR01760,NF008096,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1356311_29	phrog_30835	143.2	1.10002e-42	N/A	unknown function
UniRef90	UHGV-1356311_29	UniRef90_V6DPB7	528.0	0	Holin-like protein, putative	N/A
eggNOG-mapper	UHGV-1356311_29	438780.D2KRB8_9CAUD	238.0	0	Phage tail protein	N/A
Pfam	UHGV-1356311_29	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-1356311_29	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1356311_30	K07273	126.7	2.9e-37	acm; lysozyme	N/A
PHROG	UHGV-1356311_30	phrog_326	289.7	0	tail protein with endopeptidase domain	other
UniRef90	UHGV-1356311_30	UniRef90_V6DL75	1520.0	0	Phage lysin	N/A
eggNOG-mapper	UHGV-1356311_30	1605.Lani381_0871	372.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1356311_30	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1356311_30	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1356311_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1356311_30	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1356311_30	PF06605,PF01183,PF18994,TIGR01665,NF007404,COG3757,COG4926	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1356311	Yes	24,867	33	64	1