Viral OTU vOTU-169553

vOTU: vOTU-169553

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-169553
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-16405 → vOTU-169553
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0120306
Biosample ID	SAMEA37060918
Length	26,116 bps
CheckV Completeness	62.94% (Medium-quality)
CDS Count	48
CDS Density	90.85%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0120306_2	phrog_111	149.3	1.82169e-44	DNA methyltransferase	other
UniRef90	UHGV-0120306_2	UniRef90_UPI000F065B6D	207.0	0	adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0120306_2	1450694.BTS2_0497	189.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0120306_2	oMTase_00015	185.2	0	orphan methyltransferase	RM
Pfam	UHGV-0120306_2	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0120306_2	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_3	phrog_757	119.1	2.9e-35	DNA methyltransferase	other
UniRef90	UHGV-0120306_3	UniRef90_UPI001C00B13F	281.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0120306_3	748224.HMPREF9436_03069	214.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0120306_3	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0120306_4	phrog_424	61.4	1.8e-17	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0120306_4	UniRef90_A0A352DQ80	182.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0120306_4	665956.HMPREF1032_00140	159.0	1.4013e-45	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0120306_4	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-0120306_5	K00390	43.0	0.0000000000053	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0120306_5	phrog_424	68.6	8.5e-20	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0120306_5	UniRef90_UPI001D097961	210.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0120306_5	1151292.QEW_4547	149.0	3.67e-41	N/A	N/A
Pfam	UHGV-0120306_5	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0120306_5	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0120306_5	PF01507,MF_00063,NF002537,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-0120306_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0120306_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0120306_6	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-0120306_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0120306_7	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0120306_8	K20391	44.3	0.000000000000084	plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes	N/A
PHROG	UHGV-0120306_8	phrog_8	76.3	2.9e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0120306_8	UniRef90_A0A7X6YBU5	72.4	0.00000000000174	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0120306_8	264732.Moth_1827	55.5	0.000000434	transcriptional regulator, XRE family	N/A
PADLOC	UHGV-0120306_8	retron_type_VI_hth_cluster2_1	40.2	1.9e-19	N/A	Retron
Pfam	UHGV-0120306_8	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0120306_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0120306_8	PF01381,PF13744,NF041951,COG3655,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0120306_10	K01160	52.5	0.000000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0120306_10	phrog_140	100.3	2.1e-29	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120306_10	UniRef90_A0A7M2RKZ5	94.4	5.03e-22	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0120306_10	632245.CLP_1623	89.4	6.86e-21	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0120306_10	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0120306_10	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0120306_10	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_11	phrog_9804	51.9	0.000000000000013	N/A	unknown function
UniRef90	UHGV-0120306_11	UniRef90_A0A8D9PDS1	93.6	4.52e-22	Replisome organizer	N/A
eggNOG-mapper	UHGV-0120306_11	1121344.JHZO01000003_gene981	73.6	0.0000000000000171	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0120306_11	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0120306_11	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_12	phrog_20437	158.3	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120306_12	UniRef90_A0A3A6E2X3	240.0	0	N/A	N/A
eggNOG-mapper	UHGV-0120306_12	445971.ANASTE_00700	157.0	2.94273e-44	N/A	N/A
Pfam	UHGV-0120306_12	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0120306_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0120306_12	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0120306_13	K03111	125.4	7.5e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0120306_13	phrog_44	121.8	6.4e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120306_13	UniRef90_A0A810QFR8	143.0	2.36007e-41	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0120306_13	693746.OBV_19910	143.0	3.95026e-42	Single-strand binding protein family	N/A
Pfam	UHGV-0120306_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0120306_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0120306_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0120306_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0120306_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0120306_14	K07455	289.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0120306_14	phrog_148	273.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120306_14	UniRef90_U2SBP2	433.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0120306_14	1226322.HMPREF1545_00015	433.0	0	RecT family	N/A
Pfam	UHGV-0120306_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0120306_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0120306_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0120306_14	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_15	phrog_434	290.0	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120306_15	UniRef90_U2SK35	426.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0120306_15	1226322.HMPREF1545_00014	426.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0120306_15	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0120306_15	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0120306_15	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0120306_15	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_17	phrog_22529	97.5	8e-29	N/A	unknown function
UniRef90	UHGV-0120306_17	UniRef90_A0A352RPR8	139.0	1.31e-38	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0120306_17	1298920.KI911353_gene568	111.0	5.96e-28	3D domain	N/A
Pfam	UHGV-0120306_17	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0120306_17	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0120306_17	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120306_20	UniRef90_A0A810QCI5	72.8	0.00000000000000133	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0120306_20	1514668.JOOA01000002_gene1643	55.5	0.0000000333	N/A	N/A
Pfam	UHGV-0120306_20	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0120306_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0120306_20	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120306_21	UniRef90_G9RRP2	60.1	0.00000000223	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0120306_21	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_24	phrog_301	44.8	0.0000000000025	secreted protein	other
eggNOG-mapper	UHGV-0120306_24	1262449.CP6013_2082	172.0	0	N/A	N/A
structural_annotation	UHGV-0120306_24	PF11631,TIGR03066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120306_25	537007.BLAHAN_06565	48.5	0.00000912	sequence-specific DNA binding	N/A
Pfam	UHGV-0120306_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0120306_25	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0120306_25	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0120306_26	K14059	195.4	0	int; integrase	N/A
PHROG	UHGV-0120306_26	phrog_1	174.2	0	integrase	integration and excision
UniRef90	UHGV-0120306_26	UniRef90_UPI001EDE32BF	496.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0120306_26	1226322.HMPREF1545_00144	326.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0120306_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0120306_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0120306_26	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120306_27	1232443.BAIA02000078_gene6	59.3	0.000000000824	N/A	N/A
structural_annotation	UHGV-0120306_28	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_29	phrog_20016	192.9	0	N/A	unknown function
UniRef90	UHGV-0120306_29	UniRef90_A0A285PT46	173.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0120306_29	1226322.HMPREF1545_00077	160.0	0	N/A	N/A
structural_annotation	UHGV-0120306_29	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_30	phrog_16490	151.9	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0120306_30	1408437.JNJN01000043_gene803	120.0	2.38e-30	N/A	N/A
PHROG	UHGV-0120306_31	phrog_59	129.4	1.6e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120306_31	UniRef90_UPI00104E996D	136.0	2.04e-37	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0120306_31	767806.D7PQ37_9CAUD	124.0	1.78e-33	HNH endonuclease	N/A
PADLOC	UHGV-0120306_31	HEase_00016	114.0	2.2e-33	homing endonuclease	RM
Pfam	UHGV-0120306_31	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0120306_31	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0120306_31	PF07463,PF07453	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_32	phrog_22984	79.9	2.7e-23	N/A	unknown function
PHROG	UHGV-0120306_33	phrog_21718	109.3	2.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-0120306_33	397290.C810_05210	66.6	0.0000000000111	N/A	N/A
PHROG	UHGV-0120306_34	phrog_3754	116.1	2.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0120306_34	1226322.HMPREF1545_00073	168.0	0	N/A	N/A
KOfam	UHGV-0120306_36	K17733	93.5	2.6e-27	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0120306_36	phrog_6523	69.6	6.7e-20	endolysin	lysis
UniRef90	UHGV-0120306_36	UniRef90_R5RXG6	223.0	0	Serine-type D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-0120306_36	1519439.JPJG01000023_gene536	219.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0120306_36	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0120306_36	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0120306_36	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_37	phrog_881	86.2	1.9e-25	holin	lysis
UniRef90	UHGV-0120306_37	UniRef90_A0A133N4A6	79.7	4.61e-18	Holin family protein	N/A
eggNOG-mapper	UHGV-0120306_37	742740.HMPREF9474_02251	82.0	1.05e-19	Putative phage holin Dp-1	N/A
Pfam	UHGV-0120306_37	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0120306_37	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_39	phrog_937	41.6	0.000000000022	hemolysin	other
eggNOG-mapper	UHGV-0120306_39	1519439.JPJG01000023_gene533	89.4	5.79e-22	N/A	N/A
PHROG	UHGV-0120306_40	phrog_27545	140.2	7.60064e-42	N/A	unknown function
UniRef90	UHGV-0120306_40	UniRef90_D1PRE7	142.0	6.15e-39	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-0120306_40	1519439.JPJG01000060_gene1895	428.0	0	N/A	N/A
structural_annotation	UHGV-0120306_40	PF16170	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120306_41	1384065.JAGS01000001_gene2507	57.8	0.000000605	domain, Protein	N/A
COG	UHGV-0120306_41	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
eggNOG-mapper	UHGV-0120306_42	1519439.JPJG01000060_gene1892	145.0	1.93e-33	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0120306_42	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0120306_44	PF20942,NF041894,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120306_45	1235797.C816_04179	96.7	3.41e-19	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0120306_45	PF14594	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_46	phrog_6616	41.7	0.0000000000073	tail protein	tail
UniRef90	UHGV-0120306_46	UniRef90_A0A2Z4QA17	159.0	2.8026e-45	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0120306_46	1235797.C816_04180	181.0	0	N/A	N/A
structural_annotation	UHGV-0120306_46	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120306_47	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0120306_48	phrog_6900	233.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0120306_48	UniRef90_A0A7X8M4B4	244.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0120306_48	1499683.CCFF01000017_gene2565	274.0	0	tape measure	N/A
COG	UHGV-0120306_48	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120306_48	PF20155	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0120306	Yes	26,116	55	63	1