Viral OTU vOTU-169754

vOTU: vOTU-169754

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-169754
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 → vSUBFAM-00597 → vGENUS-18999 → vOTU-169754
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes shahii
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0096637
Biosample ID	SAMEA3449285
Length	27,041 bps
CheckV Completeness	59.12% (Medium-quality)
CDS Count	50
CDS Density	87.58%
tRNA Count	3
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0096637_1	K00175	261.5	0	korB, oorB, oforB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]	N/A
UniRef90	UHGV-0096637_1	UniRef90_D4IIQ2	505.0	0	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	N/A
eggNOG-mapper	UHGV-0096637_1	1033732.CAHI01000022_gene1534	523.0	0	ferredoxin oxidoreductase, subunit beta	N/A
Pfam	UHGV-0096637_1	PF02775	N/A	N/A	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	TPP_enzyme_C
COG	UHGV-0096637_1	COG1013	N/A	N/A	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, beta subunit	N/A
UniRef90	UHGV-0096637_2	UniRef90_UPI000B5C1847	52.0	0.00000454	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0096637_2	483216.BACEGG_03179	53.9	0.000000131	N/A	N/A
PHROG	UHGV-0096637_7	phrog_8684	112.7	2e-33	N/A	unknown function
UniRef90	UHGV-0096637_7	UniRef90_UPI0018AC4DA6	150.0	2.8026e-44	YopX family protein	N/A
eggNOG-mapper	UHGV-0096637_7	742767.HMPREF9456_02048	86.7	7.2e-20	YopX protein	N/A
Pfam	UHGV-0096637_7	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0096637_7	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0096637_7	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_11	phrog_874	70.6	2.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0096637_11	1121098.HMPREF1534_01095	148.0	8.00982e-42	N/A	N/A
structural_annotation	UHGV-0096637_11	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_12	phrog_2776	48.7	0.00000000000011	N/A	unknown function
UniRef90	UHGV-0096637_12	UniRef90_UPI001297AEBA	284.0	0	MmcB family DNA repair protein	N/A
eggNOG-mapper	UHGV-0096637_12	1283340.Q6WI17_BPKVM	53.9	0.00000121	N/A	N/A
structural_annotation	UHGV-0096637_12	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096637_16	UniRef90_F3PFX8	170.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0096637_16	483216.BACEGG_01967	176.0	0	N/A	N/A
KOfam	UHGV-0096637_19	K21919	78.4	8.5e-23	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0096637_19	phrog_31265	87.9	2.1e-25	N/A	unknown function
UniRef90	UHGV-0096637_19	UniRef90_A0A5B5VMT7	216.0	0	Pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-0096637_19	1226322.HMPREF1545_00011	117.0	3e-30	Pentapeptide repeats (8 copies)	N/A
Pfam	UHGV-0096637_19	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0096637_19	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0096637_19	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096637_19	PF19062,PF13599,NF000420	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_20	phrog_1770	100.8	1.5e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0096637_20	202954.BBNK01000034_gene3798	151.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0096637_20	PF02075,MF_00034,NF000711,COG2410	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_21	phrog_16304	72.3	6.7e-21	N/A	unknown function
UniRef90	UHGV-0096637_21	UniRef90_UPI00189BA9B9	106.0	1.61e-23	N/A	N/A
eggNOG-mapper	UHGV-0096637_21	1168289.AJKI01000067_gene1520	101.0	6.2e-24	N/A	N/A
Pfam	UHGV-0096637_21	PF19808	N/A	N/A	N/A	DUF6291
eggNOG-mapper	UHGV-0096637_22	742725.HMPREF9450_02078	113.0	1.9e-30	N/A	N/A
KOfam	UHGV-0096637_24	K01143	75.3	1.1e-21	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-0096637_24	phrog_149	122.2	4.3e-36	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096637_24	UniRef90_G5H8Z1	261.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0096637_24	742725.HMPREF9450_02077	261.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0096637_24	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0096637_24	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_25	phrog_561	170.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096637_25	UniRef90_UPI001C6361B5	206.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0096637_25	1129145.H2BD49_9CAUD	206.0	0	DNA metabolic process	N/A
PHROG	UHGV-0096637_30	phrog_2340	45.3	0.00000000000044	endonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0096637_30	PF18275	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_31	phrog_56	63.5	5.6e-30	DNA methyltransferase	other
UniRef90	UHGV-0096637_31	UniRef90_UPI00164C574E	230.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0096637_31	1236504.HMPREF2132_01695	139.0	2.11e-35	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0096637_31	MTase_II_00075	62.6	1.5e-27	Type II methyltransferase	RM
Pfam	UHGV-0096637_31	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0096637_31	PF02086,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_34	phrog_4973	40.0	0.000000000061	N/A	unknown function
Pfam	UHGV-0096637_34	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0096637_34	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
KOfam	UHGV-0096637_35	K07684	52.5	0.000000000000011	narL; two-component system, NarL family, nitrate/nitrite response regulator NarL	N/A
UniRef90	UHGV-0096637_35	UniRef90_A0A5B5VJJ0	224.0	0	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0096637_35	1116472.MGMO_177c00100	51.6	0.00000421	helix_turn_helix, Lux Regulon	N/A
Pfam	UHGV-0096637_35	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0096637_35	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0096637_35	PF00196,MF_00674,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096637_38	UniRef90_A0A644VI62	52.0	0.0000074	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-0096637_38	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0096637_38	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_39	phrog_4002	80.4	2e-23	N/A	unknown function
UniRef90	UHGV-0096637_39	UniRef90_UPI00189C26A3	158.0	4.2039e-45	N/A	N/A
eggNOG-mapper	UHGV-0096637_39	1492737.FEM08_28720	56.6	0.000000339	N/A	N/A
Pfam	UHGV-0096637_39	PF14730	N/A	N/A	N/A	DUF4468
structural_annotation	UHGV-0096637_39	PF14730,TIGR03931	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_43	phrog_606	78.3	1e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0096637_43	UniRef90_A0A6J7X176	85.9	2.43e-18	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0096637_43	266835.14021430	70.5	0.000000000000485	DNA-packaging protein gp3	N/A
Pfam	UHGV-0096637_43	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0096637_43	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0096637_44	K06909	179.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0096637_44	phrog_2	77.4	3e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0096637_44	UniRef90_A0A497PCX3	241.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0096637_44	313596.RB2501_01375	199.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0096637_44	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0096637_44	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0096637_44	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_45	phrog_12	55.5	4.6e-16	portal protein	head and packaging
UniRef90	UHGV-0096637_45	UniRef90_A0A5P2FZA3	107.0	7.37e-22	Phage portal protein	N/A
eggNOG-mapper	UHGV-0096637_45	449673.BACSTE_00582	88.2	4.3e-16	Phage portal protein	N/A
Pfam	UHGV-0096637_45	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0096637_45	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0096637_46	K06904	119.5	4e-35	N/A	N/A
PHROG	UHGV-0096637_46	phrog_80	115.7	6e-34	head maturation protease	head and packaging
UniRef90	UHGV-0096637_46	UniRef90_UPI000B385EC9	238.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0096637_46	449673.BACSTE_00581	140.0	2.39e-38	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0096637_46	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0096637_46	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0096637_46	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0096637_46	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0096637_47	phrog_10	82.1	8.6e-24	major head protein	head and packaging
UniRef90	UHGV-0096637_47	UniRef90_A0A1V5ID18	201.0	0	Phage capsid family protein	N/A
structural_annotation	UHGV-0096637_47	PF05065,PF15188,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0096637	Yes	27,041	50	59	1