Viral OTU vOTU-171889

vOTU: vOTU-171889

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-171889
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vOTU-171889
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0027719
Biosample ID	SAMEA4766011
Length	28,533 bps
CheckV Completeness	62.72% (Medium-quality)
CDS Count	46
CDS Density	88.86%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0027719_1	K22299	68.0	2e-19	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0027719_1	phrog_8	60.2	4.9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027719_1	UniRef90_F3ZVU8	70.1	0.000000000000963	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0027719_1	2325.TKV_c21810	73.9	0.00000000000000518	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0027719_1	retron_type_VI_hth_cluster2_1	42.0	0.000000000021	N/A	Retron
Pfam	UHGV-0027719_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027719_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027719_1	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0027719_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027719_2	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0027719_2	PF13560,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0027719_4	K14059	133.2	3.4e-39	int; integrase	N/A
PHROG	UHGV-0027719_4	phrog_1	148.3	6.16571e-44	integrase	integration and excision
UniRef90	UHGV-0027719_4	UniRef90_UPI000D0ECE9F	214.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0027719_4	537007.BLAHAN_06455	199.0	0	N/A	N/A
Pfam	UHGV-0027719_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0027719_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0027719_4	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0027719_5	K19304	89.0	7.2e-26	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0027719_5	phrog_14988	60.3	2.1e-17	peptidase	other
UniRef90	UHGV-0027719_5	UniRef90_UPI001E2E66D4	65.1	0.0000000241	peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-0027719_5	1087448.Eab7_0514	76.6	0.000000000000861	Peptidase, M23	N/A
Pfam	UHGV-0027719_5	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0027719_5	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-0027719_8	phrog_4105	60.3	3e-17	N/A	unknown function
PHROG	UHGV-0027719_9	phrog_372	207.4	0	tail protein	tail
UniRef90	UHGV-0027719_9	UniRef90_UPI001373A0FD	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027719_9	445971.ANASTE_00089	111.0	7.84e-23	N/A	N/A
Pfam	UHGV-0027719_9	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0027719_9	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0027719_9	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_10	phrog_6616	114.6	2e-35	tail protein	tail
UniRef90	UHGV-0027719_10	UniRef90_A0A143YYZ5	130.0	2.3e-28	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0027719_10	469596.HMPREF9488_01318	246.0	0	N/A	N/A
structural_annotation	UHGV-0027719_10	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_11	phrog_1194	113.7	8.6e-34	N/A	unknown function
UniRef90	UHGV-0027719_11	UniRef90_A0A0B3VTI7	91.7	1.93e-21	N/A	N/A
eggNOG-mapper	UHGV-0027719_11	1121333.JMLH01000047_gene1008	112.0	2.55e-30	N/A	N/A
Pfam	UHGV-0027719_11	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0027719_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_12	phrog_1535	46.4	0.000000000000008	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0027719_12	1232453.BAIF02000058_gene1637	64.7	0.00000013	phage tail tape measure protein	N/A
COG	UHGV-0027719_12	COG5412	N/A	N/A	Phage-related protein	N/A
eggNOG-mapper	UHGV-0027719_13	1121333.JMLH01000047_gene1011	57.8	0.00000000493	N/A	N/A
Pfam	UHGV-0027719_14	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0027719_14	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027719_15	469596.HMPREF9488_01310	137.0	4.19e-39	N/A	N/A
structural_annotation	UHGV-0027719_15	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027719_17	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027719_18	PF17395,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027719_19	1298920.KI911353_gene2656	85.5	1.22e-19	N/A	N/A
UniRef90	UHGV-0027719_20	UniRef90_D7GNV9	84.0	6.68e-19	Phage QLRG family, putative DNA packaging	N/A
eggNOG-mapper	UHGV-0027719_20	1298920.KI911353_gene2658	58.9	0.000000000738	N/A	N/A
Pfam	UHGV-0027719_20	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0027719_20	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_21	phrog_422	265.7	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0027719_21	645991.Sgly_0340	224.0	0	N/A	N/A
structural_annotation	UHGV-0027719_21	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_23	phrog_859	51.1	0.000000000000015	portal protein	head and packaging
UniRef90	UHGV-0027719_23	UniRef90_A0A414B033	125.0	7.65e-33	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0027719_23	1123263.AUKY01000015_gene1610	98.6	3.01e-23	cell adhesion	N/A
Pfam	UHGV-0027719_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0027719_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027719_23	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_25	phrog_64	143.7	9.79508e-43	portal protein	head and packaging
UniRef90	UHGV-0027719_25	UniRef90_A0A3D3Y472	300.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0027719_25	1121866.AUGK01000003_gene1429	290.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0027719_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0027719_25	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_26	phrog_38	198.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0027719_26	UniRef90_A0A810QA10	506.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0027719_26	1298920.KI911353_gene2682	392.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0027719_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0027719_26	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0027719_26	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027719_26	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-0027719_32	K03466	131.5	6.2e-39	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0027719_32	phrog_1358	129.7	1.2e-38	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0027719_32	UniRef90_A0A1C5UE43	121.0	3.36e-30	Stage III sporulation protein E	N/A
eggNOG-mapper	UHGV-0027719_32	335992.SAR11_0324	102.0	4.38e-22	DNA segregation ATPase FtsK SpoIIIE	N/A
PADLOC	UHGV-0027719_32	SspH_00004	54.9	8.7e-16	SspH	SSP
Pfam	UHGV-0027719_32	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0027719_32	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0027719_32	PF01580,MF_00350,TIGR03925,COG0433	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027719_33	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_35	phrog_236	115.0	1.3e-33	nucleotide kinase	other
UniRef90	UHGV-0027719_35	UniRef90_UPI001F2B3BB8	127.0	2.04e-36	N/A	N/A
eggNOG-mapper	UHGV-0027719_35	1003200.AXXA_28145	119.0	5.23e-34	N/A	N/A
Pfam	UHGV-0027719_35	PF11753	N/A	N/A	N/A	DUF3310
UniRef90	UHGV-0027719_37	UniRef90_A0A349HSI2	306.0	0	HintN domain-containing protein (Fragment)	N/A
Pfam	UHGV-0027719_37	PF12850	N/A	N/A	Calcineurin-like phosphoesterase superfamily domain	Metallophos_2
structural_annotation	UHGV-0027719_37	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
KOfam	UHGV-0027719_38	K03111	111.9	9.3e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0027719_38	phrog_44	114.9	9e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027719_38	UniRef90_A0A1Y3ZMH7	108.0	9.1e-28	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027719_38	742738.HMPREF9460_00833	99.4	1.73e-24	Single-strand binding protein family	N/A
Pfam	UHGV-0027719_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0027719_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0027719_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0027719_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0027719_38	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0027719_41	phrog_478	72.1	7.1e-21	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0027719_41	UniRef90_A0A373Q857	124.0	2.32e-33	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0027719_41	1158604.I591_01781	65.9	0.0000000000054	N/A	N/A
PHROG	UHGV-0027719_44	phrog_757	48.6	0.00000000000012	DNA methyltransferase	other
UniRef90	UHGV-0027719_44	UniRef90_A0A7J2R6L5	68.6	0.0000000000000306	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0027719_44	748224.HMPREF9436_03069	95.5	9.68e-24	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0027719_44	COG0270	N/A	N/A	DNA-cytosine methylase	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027719	Yes	28,533	55	63	1