Metagenome / Metatranscriptome Family F069393

Basic Information
Family ID	F069393
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	47 residues
Representative Sequence	APLGIPEVPPIPQLPVQVSNGKLAAAVAVLQPDAAARHNGDDADSGA
Number of Associated Samples	96
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.42 %
% of genes from short scaffolds (< 2000 bps)	2.42 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Unclassified (98.387 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.129 % of family members)
Environment Ontology (ENVO)	Unclassified (25.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.323 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00106	adh_short	5.65
PF01242	PTPS	4.84
PF13466	STAS_2	4.03
PF02511	Thy1	3.23
PF02861	Clp_N	3.23
PF13602	ADH_zinc_N_2	2.42
PF02954	HTH_8	2.42
PF00248	Aldo_ket_red	2.42
PF14691	Fer4_20	1.61
PF12802	MarR_2	1.61
PF00313	CSD	1.61
PF14520	HHH_5	0.81
PF13191	AAA_16	0.81
PF02604	PhdYeFM_antitox	0.81
PF00196	GerE	0.81
PF14690	zf-ISL3	0.81
PF02909	TetR_C_1	0.81
PF13376	OmdA	0.81
PF12695	Abhydrolase_5	0.81
PF00107	ADH_zinc_N	0.81
PF07228	SpoIIE	0.81
PF00440	TetR_N	0.81
PF01636	APH	0.81
PF06445	GyrI-like	0.81
PF08669	GCV_T_C	0.81
PF01740	STAS	0.81
PF00211	Guanylate_cyc	0.81
PF00378	ECH_1	0.81
PF00589	Phage_integrase	0.81
PF01590	GAF	0.81
PF01061	ABC2_membrane	0.81
PF12840	HTH_20	0.81
PF08241	Methyltransf_11	0.81
PF07883	Cupin_2	0.81
PF08240	ADH_N	0.81
PF07730	HisKA_3	0.81
PF02702	KdpD	0.81
PF04545	Sigma70_r4	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	4.84
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	3.23
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	3.23
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.81
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.81
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.81
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.81
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.81
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.81
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.81
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.81
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.81

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
All Organisms	root	All Organisms	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
cellular organisms	root	All Organisms → cellular organisms	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Scaffold	Taxonomy	Length	IMG/M Link
3300020579\|Ga0210407_10389137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1091	Open in IMG/M
3300021559\|Ga0210409_11240935	Not Available	621	Open in IMG/M
3300025929\|Ga0207664_10189160	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1771	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.32%
Host-Associated	Host-Associated	9.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.42%
Aquatic	Environmental → Aquatic	12.90%
Plants	Host-Associated → Plants	9.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.42%
Freshwater	Environmental → Aquatic → Freshwater	12.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Sediment	Environmental → Aquatic → Sediment	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.81%
Loam	Environmental → Terrestrial → Soil → Loam	23.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.23%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026864	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_06626240	2170459010	Grass Soil	GAPLEIPEVSQIPQLPAQVSNGKLAAAVAVLEPDAVARRNGGDTHPGT
FD1_10736680	2170459024	Grass Soil	VAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLTAAAVAPNNDDDTDPGA
deepsgr_02543890	2199352025	Soil	SDQVAVTAEAEIPGGAPLEIPEVPPIPQLPVQVSNGKAAAAVAVLEPDAVARHNGDDAHSGG
Ga0066677_104298661	3300005171	Soil	DVATEEAEIESGAPLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGDDAHPDA*
Ga0066683_105312291	3300005172	Soil	PLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDAAPGA*
Ga0070714_1020387992	3300005435	Agricultural Soil	APLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA*
Ga0070710_104088062	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA*
Ga0070711_1008969541	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GAPLEIPEVPQIPQLPVQVSNGKVAAAVAVLEPDAVARHNGDDVHSGV*
Ga0070706_1000758246	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EDVAKEEAEIESGAPLQIPEVPPIPTLPMQAGNGKQAAAAVARHNDDDADPGA*
Ga0070698_1002874183	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EITSGAPLEIPEVPQIPQLPVQVSNGKVAAAVAVAPHEDEAPSGA*
Ga0070698_1009683132	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GNEDVAKEEAEIESGAPLQIPEVPPIPTLPMQAGNGKQAAAAVARHNDDDADPGA*
Ga0070698_1009750021	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AAEAEITSGAPLEIPEVPPIPELPVQASNGTLAAAVAVPQPDAVARHNDDATDSGA*
Ga0070698_1011454451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PLEIPEVPQIPQLPVQVSNGKVAAAAVPQPDAVARHNGDDAHLGV*
Ga0070698_1011836592	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AEAEAEITGGAPLEMPEVPPIPQLPIQVSNGELAAAVAVPQPDAVARHSDDEHPGA*
Ga0070697_1001815921	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IPEVPPVPELPMQVSNGKLAAATVPQPDAVARHNDDAADSGA*
Ga0070696_1001996514	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	APLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA*
Ga0066695_103488311	3300005553	Soil	AEIESGAPLEIPEVPPIPTLPTQVGNGKLAAPAVPQPDAVARRNDDDADSGA*
Ga0066706_108718971	3300005598	Soil	IESGAPLQIPQVPPIPTLPTQVGNGKLAAPAVPQPDAVARRNDDDADSGA*
Ga0070763_109399701	3300005610	Soil	APLEIPEVPPIPELPTQASNGKLPVAAAAVPQPDAAARHNDHATDPGE*
Ga0068864_1010077761	3300005618	Switchgrass Rhizosphere	APLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA*
Ga0070717_101534084	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EAEIESGAPLQIPEVPPIPTLPTQAGNGKLAAAVARHNDDDADSGA*
Ga0070717_115049862	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ITGGAPLGIPEVPPIPRPSVQVSNGKLAAVAAQSDATARDVGDAYPGA*
Ga0066652_1008949211	3300006046	Soil	EEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDAAPGA*
Ga0070715_102098612	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	IPEVPPIPTLPMQVGNGKLAAGAVARNNDDDADSGA*
Ga0070716_1010091843	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA*
Ga0075014_1006213141	3300006174	Watersheds	IPQVPPIPTLPMQTGNGKLAATTVPRPGAAARHNDDAADPGA*
Ga0070712_1014076021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ADFGDEDVAKEEAEIESGAPLQIPEVPPIPTLPTQAGNGKLAAAVARHNDDDADSGA*
Ga0079222_109243391	3300006755	Agricultural Soil	PQLPVQVSNGKLAAAVAVLEPDAVAGHNGDDTHPGT*
Ga0079222_109405731	3300006755	Agricultural Soil	ITSEAPLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA*
Ga0079221_101231471	3300006804	Agricultural Soil	IPEVPPIPTSPMRAGNGKVAAAAVARHSGDDADSGA*
Ga0079221_114923801	3300006804	Agricultural Soil	PPIPTLPIQAGNGKQAAAAAPRPDAVARHNDDDADPGA*
Ga0075425_1021113341	3300006854	Populus Rhizosphere	PEVPPIPQLPVQVSNGQQTAPVAVLPDAPARHNGDDTHSDA*
Ga0075425_1028764781	3300006854	Populus Rhizosphere	IESGAPLQIPEVPPIPTLPIQAGNGKQAAAAAPRPDAVARRNDDDADPGA*
Ga0075435_1012405211	3300007076	Populus Rhizosphere	PLEIPQVPPIPTLPTPVGNGKLAAAAVARHNNDDTAPGA*
Ga0075435_1016170191	3300007076	Populus Rhizosphere	DEDVATEEAEIESGAPLQIPEVPPIPTLPPQAGNGNMAAAAAPQPGTTPRHNNNDADPGA
Ga0099828_110349851	3300009089	Vadose Zone Soil	PLQIPEVPPIPTLPAHAGNASLAPAAVPQPATMAQHNDDNADSGP*
Ga0066709_1041623171	3300009137	Grasslands Soil	EEAEIESGAPLQIPQVPPIPTLPTQVGNGELAAAAVAQPGAVARHNDDSADPGA*
Ga0075423_119488881	3300009162	Populus Rhizosphere	VPPIPALPAQAGNGKVAAAAAPRPDAAVRRNDDDADPGA*
Ga0075423_123626071	3300009162	Populus Rhizosphere	EEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA*
Ga0075423_129225371	3300009162	Populus Rhizosphere	TEEAEIESGAPLQIPEVPPIPTLPPQAGNGNMAAAAAPQPGTTPRRNNNDADPGA*
Ga0116222_12312731	3300009521	Peatlands Soil	IPQLPAQVSNGKPAAAVAVLQPDAAARHNGDDADSGA*
Ga0116216_102869602	3300009698	Peatlands Soil	APLGIPEVPPIPQLPVQVSNGKLAAAVAVLQPDAAARHNGDDADSGA*
Ga0116216_109131051	3300009698	Peatlands Soil	AAAEAEITGGAPLEIPEVPPIPQLPIPESNGKLAAAAVLQPDTVAQHSDDDAHSGA*
Ga0127445_10818351	3300010085	Grasslands Soil	EDVAKEEAEIESGAPLEIPQVPPIPTLSTPVGNGKLAAAAAARHTDDDAAPGA*
Ga0134126_111849111	3300010396	Terrestrial Soil	PQLPVQVSNGKVAAAVAVLEPDAVARHNGDDAHSGA*
Ga0134124_103263573	3300010397	Terrestrial Soil	IPEVPQIPVQVSNGKLTAAVAVPQPDAVARRNGDAHSDV*
Ga0126344_10387751	3300010866	Boreal Forest Soil	LPVQVSNGKLGTAAVPQPDAVPQPDAVARHSDDDAHSGS*
Ga0150983_142618871	3300011120	Forest Soil	EEAAIESGAPLEIPAVPPIPTLPVQAANGELAAAVVPQPGAVARHADDADSGA*
Ga0150983_155596003	3300011120	Forest Soil	EIPDVPQIPQLPVQVSNGKLAAAVAVLEPDAVARHNGDDTHLGT*
Ga0150983_160088721	3300011120	Forest Soil	PQLPAQVSNGKQTAAVAVLPDAPARHNGDDAHSDA*
Ga0137389_100605041	3300012096	Vadose Zone Soil	AAEAEITSGAPLEIPAVPPIPQPSIRVSNGNLAAAAVPEPNAVARHSDDDAHSGA*
Ga0137364_108087002	3300012198	Vadose Zone Soil	VAREEAEIESGAPLEIPEVPPIPMQAANGELAAAAVAVPQPGAVARHNDDADSGA*
Ga0137378_108619521	3300012210	Vadose Zone Soil	DVAAAEAEITSGAPLEIPEVPQIPQIPQLPVQVSNGKQTAAVAVLQPDAMARHNGDDAHSGA*
Ga0137390_107644482	3300012363	Vadose Zone Soil	LEIPAVPPIPQPSIHVSNGSLAAAAVPQPDAVARHGDDDARSGA*
Ga0164309_107886041	3300012984	Soil	EAESTSGAPLEIPEAPPVPQLPVQVSNRTQTVAVAVQPDAAARHNGGDAHSDA*
Ga0134078_103486131	3300014157	Grasslands Soil	EEAQIESGAPLQIPQVPPIPTLPAQVGNSELVAAVARHNDDADPGA*
Ga0134079_104376001	3300014166	Grasslands Soil	EDVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDAAPGA*
Ga0134079_106431461	3300014166	Grasslands Soil	SGAPLQIPEVPPIPTLPMQVGNGKVAAAAVPQPGAAGRHSDDADSGA*
Ga0163163_129527111	3300014325	Switchgrass Rhizosphere	FGNEDVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA*
Ga0157376_127167382	3300014969	Miscanthus Rhizosphere	AIPEVPQIPVQVSNGKLTAAAAVPQPDAVARRNGDAHSGV*
Ga0132258_114088523	3300015371	Arabidopsis Rhizosphere	EIESGAPLQIPEVPPIPTLPLQAGNGNMAAAAAPQPGTTPRRNNNDADPGA*
Ga0182034_117466901	3300016371	Soil	AAEAEAAITGGGPLEVPEAPPIPQLPIQVSNGKPAAAAAVPQPDAAARHSDGDAHSGG
Ga0187812_12632551	3300017821	Freshwater Sediment	APLEIPEVPPIPQPPIQVSNGNLAAAAVPQPDAVAQHSGDDAHSSAKAPPA
Ga0187820_11134231	3300017924	Freshwater Sediment	PQLPVQVSNGNLAAAAVPQPDAVAQHSGDDAHSSAKAPPA
Ga0187806_13304722	3300017928	Freshwater Sediment	EIPEVPPIPQLPVQVSNGKLAAAVAVPQPDAVALHNGDNADLGASAPPA
Ga0187814_100622011	3300017932	Freshwater Sediment	AAITGGAPLEIPEVPPIPQLPAQVSNGKLAAAAAAPQPDAAARHSDDDR
Ga0187814_100645101	3300017932	Freshwater Sediment	DVAEAEAEITSGAPLEVPEVPPIPQLPIQVSNGKLAAAAMPQPGGAARHSDGDEHPGE
Ga0187814_104304611	3300017932	Freshwater Sediment	AAEAEITGGAPLEIPEVPPIPQLPIQAGNGQVAAAAVLQPDVVAGRGDDDAQPGV
Ga0187801_101781592	3300017933	Freshwater Sediment	GGAPLEIPEVPPIPQLPISESNGKLAAAAVLQPDTVARHSDDDTHSGA
Ga0187809_101945621	3300017937	Freshwater Sediment	APLEIPEVPPIPQLPISESNGKLAAAAVLQPDTVARHSDDDTHSGA
Ga0187808_101740511	3300017942	Freshwater Sediment	AAEAEITSGAPLEIPEVPPIPQLPIQVSNGKLAAAAAVLQPDAAAPHNDDAHPGA
Ga0187808_105083172	3300017942	Freshwater Sediment	FGGEDVAAAEAQITGGVPLEIPEVPPIPQLPIQVSNGKLAAAAVLQPDAVARHSGDDAHPGA
Ga0187817_107086392	3300017955	Freshwater Sediment	ITGGAPLEIPEVPPLPQLPVQAGNGKLAAAAVTQPDAAARHSDDGAH
Ga0187815_100480821	3300018001	Freshwater Sediment	PPIQVSNGNLAAAAVPQPDAVAQHSGDDAHSSAKAPPA
Ga0187885_101350171	3300018025	Peatland	PPIPELPLQVSNGKLAATAAVPQPARHDDDAAESGA
Ga0187857_103361763	3300018026	Peatland	APLEIPEVPPIPELPLQVSNGKLAATAAVPQPARHDDDAAESGA
Ga0187887_104338451	3300018043	Peatland	IESGAPLEIPEVPPIPELPLQVSNGKLAATAAVPQPARHDDDAAESGA
Ga0184585_1353502	3300019189	Soil	EAEVQSGAPLEIPDVPLIPQLPLQASNGKLAAAAAGPVPDPVTRPSDDAADSGA
Ga0193732_10566862	3300020012	Soil	PQIPQLPVQVSNGKVAAAVAVLEPDAVARHNGDDAHSGA
Ga0210407_103891371	3300020579	Soil	PQLPAQVSNGKQTAAVAVLPDAPARHNGDDAHSDA
Ga0210399_103170834	3300020581	Soil	TSGAPLEIPEVPPVPQLPAQVSNGKQTAAVAVLPDAPARHNGDDAHSDA
Ga0210399_106154421	3300020581	Soil	PPIPTLPMQVGNGRLAATAVPQPGAVAGHDDDDADSGA
Ga0210383_102034773	3300021407	Soil	DFGNEDVDKEEAEIQSGAPLQIPEVPPIPTSPMQVGNGKLTAAVVAPHNDDADPGA
Ga0210383_105094532	3300021407	Soil	AEAEIENGAPLEIPEVPPIPELPRHASNGNLAAAAAVPQPATAARHNHDAADPGA
Ga0210383_113802382	3300021407	Soil	EVAPIPQLPIQVSNGKVAAAAMPQPDAAARHSDGDAHPGA
Ga0210384_107272851	3300021432	Soil	AEAEITSGAPLEIPEVPPIPQLPVQVSNGKLVAAGAVLQPDTAARHDDDDAHPGA
Ga0210402_104347691	3300021478	Soil	PIPQLPVQVSNGKLTAAVAVLQPDAVAQHNGDDPHSDV
Ga0210402_105502961	3300021478	Soil	LEIPEVPPIPTPPMQVGNGKLAVAAVARHNNDAADPGA
Ga0210402_107558151	3300021478	Soil	ITSEAPLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA
Ga0210409_112409351	3300021559	Soil	AEITSGAPLEIPEVPQLPQLPVQVSNGELAAAGAVLQPDAVARHNGGDAHSDV
Ga0247692_10394231	3300024279	Soil	VPQIPVQVSNGKLTAAAAVPQPDAVARRNGDAHSDV
Ga0207692_103047681	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NEDVEKEEAEITSGALEIPEVPPIPRLPTHASNGKLAAAVPRPDAAAQHNNDTVDSGA
Ga0207685_104658451	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA
Ga0207684_100571785	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EIPEVLPIPELPMQASNGKLAAAAAVPQPDASARDNGDAADSGA
Ga0207684_101160633	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PPLEIPEVPPIPQLPMQASDGQLAAAAAAPEPDAVARHDDTAADSGA
Ga0207693_110877982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ADFGDEDVAKEEAEIESGAPLQIPEVPPIPTLPTQAGNGKLAAAVARHNDDDADSGA
Ga0207664_101891601	3300025929	Agricultural Soil	LEIPEVPRIPQLPVQVSNGQQTAPVAVLPDAPARHNGDDAHSDA
Ga0207641_109448471	3300026088	Switchgrass Rhizosphere	GAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA
Ga0209621_10115241	3300026864	Forest Soil	EVPQIPVQVGNGKLTAAVAVPQPDAVARRNGDAHSDV
Ga0208827_10223644	3300027641	Peatlands Soil	TSGAPLGIPEVPPIPQLPVQVSNGKLAAAVAVLQPDAVAPHNGDADSGA
Ga0209420_10024686	3300027648	Forest Soil	ESGAPIEIPEVPPIPQLPLQATNGKLATVAAGPPPDAVARPNDDAADSGA
Ga0307313_102166311	3300028715	Soil	SDQVAVTAEAEIPGGAPLAIPEVPPIPQLPVQVSNGKVAAAVAVLEPDAVARHNGDDTHSGA
Ga0307282_104858501	3300028784	Soil	APLEIPQVPPIPTLPTPVGNGKLAAAAMARHNDDDAAPGA
Ga0307296_100758294	3300028819	Soil	EEAEIESGAPLAIPQVPPIPTLPTPVGNGKLAAAAAVPQPDAAARHSDDADSGA
Ga0307296_107745961	3300028819	Soil	LAIPEVPQIPQLPVPASNGKLTAAVAVPQPDAAARRNGDDAHLGV
Ga0170824_1244718451	3300031231	Forest Soil	LEIPEVPPIPQLPVQVSNGKLAAAAAVPQPDPVARHNNDDAHSGA
Ga0170818_1013608751	3300031474	Forest Soil	PIPQLPAQVSNGKLAAAAAVPQPDPVARHNNDDAHSGA
Ga0318516_102017493	3300031543	Soil	VPPIPELPGQASNGKLAAAAVPQPDAAARHNHDAADSGA
Ga0318534_101106541	3300031544	Soil	PLEIPEVPPIPELPGQASNGKLAAAAVPQPDAAARHNHDAADSGA
Ga0307475_110761371	3300031754	Hardwood Forest Soil	EVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA
Ga0307473_102156252	3300031820	Hardwood Forest Soil	EIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDADSGA
Ga0318520_102869901	3300031897	Soil	APLEIPEVPPIPELPGQASNGKLAAAAVPQPDAAARHNHDAADSGA
Ga0318520_106996071	3300031897	Soil	PQLPIQVSNGKLAAAAVAQPDAVARHNDDDADSGAQAPPA
Ga0306921_112765392	3300031912	Soil	PLEVPEVPPIPQLPVQVSNGKPTAAAVPQPDAAARHSDGDAHSGG
Ga0310916_116785271	3300031942	Soil	AEAEAAITGGAPLEVPEVPPIPQLPIQVSNGKPAAAAVPQPGAAARHSDGDAHSGG
Ga0307470_116468511	3300032174	Hardwood Forest Soil	NEDVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA
Ga0307471_1043134412	3300032180	Hardwood Forest Soil	PLEIPEVPPIPQLPVQVSNGKLTAAVAVLQPDAVAQHNGDDPHSDV
Ga0315742_112947133	3300032756	Forest Soil	QSGAPVEIPEVPLIPQLPLQATNGKLAAAAAGPAPDAVARPNDDAADSGA
Ga0315742_119914511	3300032756	Forest Soil	TGAAALEIPEVPPIPQLLVQVGNGKLAAVAAAQPDALARSDDGDADSGAQTPLA
Ga0315742_122726731	3300032756	Forest Soil	AEIDNEAPLEIPEVPAIPQLPIQASNGKLAAATVGPVPDATAQHNDDAAEPGA
Ga0335078_117570431	3300032805	Soil	GAAITSGAPLEVPEVPPIPQLPIQASNGKLAAATAGLQPDAAARHSDDDAHPGA
Ga0335083_104728753	3300032954	Soil	ESGAPLQIPQVPPIPTLPAQVGNGELAAATVARHNDDADPGA
Ga0335076_100666457	3300032955	Soil	TEEAEIESGAPLEIPEVPPIPALPTPAGNGKLAAAAAAVPQPDTAAQPSDDTADPGA
Ga0335084_104819621	3300033004	Soil	AEAEIMGGAPPEISEIPAIPQLPRQISNGKLAAAAVPQPDAMARHSDDDAHSGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069393

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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