Metagenome / Metatranscriptome Family F054946

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054946
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	45 residues
Representative Sequence	LAFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGFGL
Number of Associated Samples	72
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	83.45 %
% of genes from short scaffolds (< 2000 bps)	80.58 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.360 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (38.849 % of family members)
Environment Ontology (ENVO)	Unclassified (89.209 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.331 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.18% β-sheet: 0.00% Coil/Unstructured: 80.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF04412	AcnX	76.26
PF01989	AcnX_swivel_put	12.95
PF05833	NFACT_N	2.88
PF02570	CbiC	2.16
PF05670	NFACT-R_1	2.16
PF00590	TP_methylase	0.72
PF13240	zinc_ribbon_2	0.72
PF00892	EamA	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1679	Mevalonate 5-phosphate dehydratase subunit 1, aconitase superfamily (modified mevalonate pathway)	Lipid transport and metabolism [I]	76.26
COG1786	Mevalonate 5-phosphate dehydratase subunit 2, swiveling domain (modified mevalonate pathway)	Lipid transport and metabolism [I]	12.95
COG1293	Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains	Translation, ribosomal structure and biogenesis [J]	5.04
COG2082	Precorrin-8X methylmutase CbiC/CobH	Coenzyme transport and metabolism [H]	2.16

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
All Organisms	root	All Organisms	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
cellular organisms	root	All Organisms → cellular organisms	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	33.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	33.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	13.67 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	7.19 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
Candidatus Nitrosotenuis	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	13.67 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	4.32 %
Thaumarchaeota archaeon SCGC AC-337_F14	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	2.88 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	2.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	4.32 %
Thaumarchaeota archaeon SCGC AC-337_F14	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	2.88 %
Nitrosarchaeum	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	1.44 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.72 %
Candidatus Nitrosotenuis chungbukensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	0.72 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.36 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	4.32 %
Thaumarchaeota archaeon SCGC AC-337_F14	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	2.88 %
Nitrosarchaeum koreense	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Nitrosarchaeum koreense	0.72 %
Candidatus Nitrosopumilus koreensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	0.72 %
Candidatus Nitrosotenuis chungbukensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	0.72 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573026\|GS311G0146KB_1112079610784	Not Available	757	Open in IMG/M
3300000157\|LPaug08P261000mDRAFT_c1025360	Not Available	828	Open in IMG/M
3300001125\|JGI11931J13222_1000318	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Nitrosarchaeum koreense	6446	Open in IMG/M
3300001707\|supr50_100109	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	6590	Open in IMG/M
3300001780\|supr46_1074497	Not Available	557	Open in IMG/M
3300001783\|Vondamm_10131164	Not Available	607	Open in IMG/M
3300005399\|Ga0066860_10192634	Not Available	695	Open in IMG/M
3300005431\|Ga0066854_10263810	Not Available	581	Open in IMG/M
3300005948\|Ga0066380_10286517	Not Available	505	Open in IMG/M
3300006002\|Ga0066368_10249712	Not Available	602	Open in IMG/M
3300006012\|Ga0066374_10038274	Not Available	1333	Open in IMG/M
3300006078\|Ga0081595_1019952	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2252	Open in IMG/M
3300006303\|Ga0068490_1365788	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	855	Open in IMG/M
3300006304\|Ga0068504_1209356	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1802	Open in IMG/M
3300006304\|Ga0068504_1304865	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1462	Open in IMG/M
3300006306\|Ga0068469_1148891	Not Available	1176	Open in IMG/M
3300006306\|Ga0068469_1299783	All Organisms → cellular organisms → Archaea	1385	Open in IMG/M
3300006306\|Ga0068469_1338259	All Organisms → cellular organisms → Archaea	899	Open in IMG/M
3300006306\|Ga0068469_1467056	Not Available	761	Open in IMG/M
3300006306\|Ga0068469_1506930	Not Available	698	Open in IMG/M
3300006308\|Ga0068470_1297808	Not Available	748	Open in IMG/M
3300006308\|Ga0068470_1314899	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1901	Open in IMG/M
3300006308\|Ga0068470_1364462	Not Available	912	Open in IMG/M
3300006308\|Ga0068470_1411935	Not Available	561	Open in IMG/M
3300006310\|Ga0068471_1147417	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	3938	Open in IMG/M
3300006313\|Ga0068472_10350320	All Organisms → cellular organisms → Archaea	1090	Open in IMG/M
3300006313\|Ga0068472_10362844	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2132	Open in IMG/M
3300006313\|Ga0068472_10373515	All Organisms → cellular organisms → Archaea	1066	Open in IMG/M
3300006313\|Ga0068472_10376096	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1991	Open in IMG/M
3300006313\|Ga0068472_10431441	All Organisms → cellular organisms → Archaea	1168	Open in IMG/M
3300006313\|Ga0068472_10436500	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2183	Open in IMG/M
3300006313\|Ga0068472_10486231	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1182	Open in IMG/M
3300006313\|Ga0068472_10510066	All Organisms → cellular organisms → Archaea	870	Open in IMG/M
3300006313\|Ga0068472_10565721	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1551	Open in IMG/M
3300006316\|Ga0068473_1389522	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	620	Open in IMG/M
3300006316\|Ga0068473_1518420	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2852	Open in IMG/M
3300006316\|Ga0068473_1635089	Not Available	649	Open in IMG/M
3300006323\|Ga0068497_1068619	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	6589	Open in IMG/M
3300006323\|Ga0068497_1109043	Not Available	801	Open in IMG/M
3300006324\|Ga0068476_1403900	Not Available	1982	Open in IMG/M
3300006325\|Ga0068501_1500654	Not Available	898	Open in IMG/M
3300006326\|Ga0068477_1238500	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2897	Open in IMG/M
3300006326\|Ga0068477_1494219	Not Available	602	Open in IMG/M
3300006330\|Ga0068483_1338352	Not Available	659	Open in IMG/M
3300006330\|Ga0068483_1591752	All Organisms → cellular organisms → Archaea	875	Open in IMG/M
3300006331\|Ga0068488_1322539	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1340	Open in IMG/M
3300006331\|Ga0068488_1350917	Not Available	720	Open in IMG/M
3300006331\|Ga0068488_1353033	Not Available	752	Open in IMG/M
3300006331\|Ga0068488_1676280	Not Available	589	Open in IMG/M
3300006335\|Ga0068480_1160814	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2196	Open in IMG/M
3300006335\|Ga0068480_1324098	All Organisms → cellular organisms → Archaea	868	Open in IMG/M
3300006335\|Ga0068480_1326161	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2121	Open in IMG/M
3300006335\|Ga0068480_1370907	All Organisms → cellular organisms → Archaea	963	Open in IMG/M
3300006335\|Ga0068480_1383453	Not Available	537	Open in IMG/M
3300006335\|Ga0068480_1790828	Not Available	802	Open in IMG/M
3300006336\|Ga0068502_1359269	Not Available	562	Open in IMG/M
3300006336\|Ga0068502_1361249	Not Available	629	Open in IMG/M
3300006336\|Ga0068502_1371498	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4512	Open in IMG/M
3300006336\|Ga0068502_1930879	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	543	Open in IMG/M
3300006338\|Ga0068482_1316045	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3786	Open in IMG/M
3300006338\|Ga0068482_1327499	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2836	Open in IMG/M
3300006338\|Ga0068482_1335899	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1641	Open in IMG/M
3300006338\|Ga0068482_1351972	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2151	Open in IMG/M
3300006338\|Ga0068482_1468804	Not Available	580	Open in IMG/M
3300006338\|Ga0068482_1473683	Not Available	1359	Open in IMG/M
3300006338\|Ga0068482_1850793	Not Available	590	Open in IMG/M
3300006340\|Ga0068503_10460860	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2255	Open in IMG/M
3300006340\|Ga0068503_10494478	Not Available	849	Open in IMG/M
3300006340\|Ga0068503_10560859	Not Available	1115	Open in IMG/M
3300006340\|Ga0068503_10605084	All Organisms → cellular organisms → Archaea	859	Open in IMG/M
3300006341\|Ga0068493_10415633	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	4066	Open in IMG/M
3300006341\|Ga0068493_10467591	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1581	Open in IMG/M
3300006341\|Ga0068493_10595156	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1375	Open in IMG/M
3300006341\|Ga0068493_10627230	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1478	Open in IMG/M
3300006341\|Ga0068493_10658132	All Organisms → cellular organisms → Archaea	1051	Open in IMG/M
3300006341\|Ga0068493_10763194	All Organisms → cellular organisms → Archaea	873	Open in IMG/M
3300006344\|Ga0099695_1135905	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2482	Open in IMG/M
3300006346\|Ga0099696_1303195	Not Available	620	Open in IMG/M
3300006346\|Ga0099696_1335958	Not Available	649	Open in IMG/M
3300006346\|Ga0099696_1361844	Not Available	877	Open in IMG/M
3300006347\|Ga0099697_1104744	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	6922	Open in IMG/M
3300006347\|Ga0099697_1210962	All Organisms → cellular organisms → Archaea	1376	Open in IMG/M
3300006347\|Ga0099697_1218878	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3195	Open in IMG/M
3300006347\|Ga0099697_1404776	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1946	Open in IMG/M
3300006347\|Ga0099697_1419957	All Organisms → cellular organisms → Archaea	925	Open in IMG/M
3300006414\|Ga0099957_1057372	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4532	Open in IMG/M
3300006414\|Ga0099957_1246906	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1588	Open in IMG/M
3300006414\|Ga0099957_1549932	Not Available	610	Open in IMG/M
3300006416\|Ga0100043_10665167	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	859	Open in IMG/M
3300006567\|Ga0099958_1165150	All Organisms → cellular organisms → Archaea	906	Open in IMG/M
3300006567\|Ga0099958_1247090	Not Available	684	Open in IMG/M
3300006567\|Ga0099958_1291930	Not Available	685	Open in IMG/M
3300006567\|Ga0099958_1296083	Not Available	554	Open in IMG/M
3300006567\|Ga0099958_1301245	Not Available	2031	Open in IMG/M
3300006900\|Ga0066376_10720872	Not Available	547	Open in IMG/M
3300006902\|Ga0066372_10638962	Not Available	636	Open in IMG/M
3300006902\|Ga0066372_10672754	Not Available	621	Open in IMG/M
3300007160\|Ga0099959_1139773	Not Available	1195	Open in IMG/M
3300007160\|Ga0099959_1259854	Not Available	707	Open in IMG/M
3300007160\|Ga0099959_1276935	Not Available	713	Open in IMG/M
3300007160\|Ga0099959_1321005	Not Available	747	Open in IMG/M
3300007514\|Ga0105020_1141396	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1754	Open in IMG/M
3300008251\|Ga0105359_10445109	Not Available	592	Open in IMG/M
3300008254\|Ga0105351_1181157	Not Available	686	Open in IMG/M
3300009108\|Ga0117920_1066325	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1585	Open in IMG/M
3300009109\|Ga0117922_1157122	Not Available	1045	Open in IMG/M
3300009173\|Ga0114996_10571472	All Organisms → cellular organisms → Archaea	843	Open in IMG/M
3300009335\|Ga0117926_1054276	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1691	Open in IMG/M
3300009339\|Ga0117928_1033084	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2531	Open in IMG/M
3300009481\|Ga0114932_10857773	Not Available	525	Open in IMG/M
3300011320\|Ga0138358_1021947	All Organisms → cellular organisms → Archaea	920	Open in IMG/M
3300011321\|Ga0138361_1098679	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1983	Open in IMG/M
3300012950\|Ga0163108_11128399	Not Available	505	Open in IMG/M
3300017775\|Ga0181432_1089338	All Organisms → cellular organisms → Archaea	908	Open in IMG/M
3300020407\|Ga0211575_10018477	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	3028	Open in IMG/M
3300020447\|Ga0211691_10318455	Not Available	618	Open in IMG/M
3300020449\|Ga0211642_10168565	All Organisms → cellular organisms → Archaea	946	Open in IMG/M
3300020458\|Ga0211697_10144981	Not Available	983	Open in IMG/M
3300021089\|Ga0206679_10674801	Not Available	521	Open in IMG/M
3300021443\|Ga0206681_10222175	Not Available	736	Open in IMG/M
3300021973\|Ga0232635_1116596	Not Available	641	Open in IMG/M
3300021977\|Ga0232639_1363132	Not Available	558	Open in IMG/M
3300026119\|Ga0207966_1118806	Not Available	605	Open in IMG/M
3300026253\|Ga0208879_1265590	Not Available	636	Open in IMG/M
3300028190\|Ga0257108_1106170	All Organisms → cellular organisms → Archaea	829	Open in IMG/M
3300031606\|Ga0302119_10118565	All Organisms → cellular organisms → Archaea	1066	Open in IMG/M
3300031606\|Ga0302119_10235849	Not Available	698	Open in IMG/M
3300031701\|Ga0302120_10349946	Not Available	527	Open in IMG/M
3300031801\|Ga0310121_10087377	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	2019	Open in IMG/M
3300031801\|Ga0310121_10158066	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	1407	Open in IMG/M
3300031801\|Ga0310121_10666520	Not Available	555	Open in IMG/M
3300031803\|Ga0310120_10019315	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon SCGC AC-337_F14	4208	Open in IMG/M
3300031803\|Ga0310120_10243947	All Organisms → cellular organisms → Archaea	967	Open in IMG/M
3300031803\|Ga0310120_10370287	Not Available	740	Open in IMG/M
3300031861\|Ga0315319_10298301	Not Available	812	Open in IMG/M
3300031886\|Ga0315318_10347563	Not Available	850	Open in IMG/M
3300032130\|Ga0315333_10396112	Not Available	652	Open in IMG/M
3300032360\|Ga0315334_10619512	Not Available	934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	81.30%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.32%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.32%
Coastal	Environmental → Aquatic → Marine → Coastal	3.60%
Strait	Environmental → Aquatic → Marine → Strait	0.72%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.72%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	38.85%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	24.46%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	17.99%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.60%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	2.16%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	38.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	23.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.04%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.32%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.60%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.88%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	2.16%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.44%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	1.44%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.72%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine	0.72%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.72%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.72%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573026	Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-FOS-0p8-Deep1200	Environmental	Open in IMG/M
3300000157	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000m	Environmental	Open in IMG/M
3300001125	Marine microbial communities from the Deep Atlantic Ocean - MP0204	Environmental	Open in IMG/M
3300001707	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr50	Environmental	Open in IMG/M
3300001780	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Supr46	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005658	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF86A	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300006078	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid C	Environmental	Open in IMG/M
3300006303	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_1_1000m	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006344	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006416	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300008251	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM8C Gulf of Mexico	Environmental	Open in IMG/M
3300008254	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN4B Hudson Canyon	Environmental	Open in IMG/M
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009335	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009339	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 103m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300011320	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 250_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011321	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300021973	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmer	Environmental	Open in IMG/M
3300021977	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS925 _150kmer	Environmental	Open in IMG/M
3300026119	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS311G0146KB_00524170	2189573026	Marine Estuarine	LAFLYNSDYERGVPHPPQNFAAGFSGLPQLLQDEDVGLVSAGFGLGI
LPaug08P261000mDRAFT_10253601	3300000157	Marine	LAFIYNSDYERGVPHSPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGFCFAM
JGI11931J13222_10003181	3300001125	Deep Ocean	LVFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDED
supr50_10010911	3300001707	Hydrothermal Vent Plume	LAFLYNSDYERWVPHPPQNFAVGFSEAPQLPQDEDVCLVSDDFGLGL*
supr46_10744972	3300001780	Hydrothermal Vent Plume	LAFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGFGLGSFFVWIDIG
Vondamm_101311641	3300001783	Hydrothermal Vent Plume	LAFLYNSDYELGVPHPPQNFAVGFSLVPQLLQDEDVSFFSAGFLAT
Ga0066860_101926341	3300005399	Marine	LAFLYNSDYEHGVPHLPQNFAVGFSVFPQLLQDEDVCLVSADFGLGSILCLDRYWSS
Ga0066854_102638101	3300005431	Marine	LAFLYNSDYDCVACFEPHLPQNFAVGFSGLPQLLQDEDVCLVS
Ga0066842_101033352	3300005658	Marine	LAFLYNSDYERGLPHPLQNFAVGLSDFPQLSQKLLSDSLVSAGFR
Ga0066380_102865171	3300005948	Marine	LAFIYNSDYERGVPHLPQNFAVGFSGFPQLLQDEDVCLVSAGF
Ga0066368_102497122	3300006002	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEDVGLVS
Ga0066374_100382742	3300006012	Marine	LAFLYNSDYERWVPHPPQNFAVGFNLAPQLLQDKAVGIVSAGFRVGL*
Ga0081595_10199521	3300006078	Diffuse Hydrothermal Fluids	LAFLYNSDYERWVPHPPQNFAVGFSLAPQLLQDKAVGIVSAGFRVGL*
Ga0068490_13657881	3300006303	Marine	LVFLYNSDYERGAPHLPQNFAVGFSVFPQLLQDEDVCLVSADFG
Ga0068504_12093564	3300006304	Marine	LAFLYNSDYERGVPHLPQNFAVGFSGFPQLLQDEDAGLDSA
Ga0068504_13048651	3300006304	Marine	LAFLYNSDYEYYCLEPHLPQNFAAGFSLVPQLLQDEDVSLISAGFRVGFSPCLR
Ga0068469_11488913	3300006306	Marine	LAFLYNSDYGYCFDPHLPQNFAVGFSGLPQLLQDEDGDLVSAGFLVG
Ga0068469_12997831	3300006306	Marine	LAIIYNSDYERGVPHPPQNFASGFSGFPQMLQDEDDSFFSAGFRLGS
Ga0068469_13382591	3300006306	Marine	LAFIYNSDYERGVPHPPQNFASDFSGFPQLLQDEDVAFFSAGFCLAGFTHF
Ga0068469_14670561	3300006306	Marine	NYDLAYLYNSDYECYCFDPHLPQNFAVGFRGFPQLLQDEDVCLVSTGFGLGR*
Ga0068469_15069302	3300006306	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGFPLLLQDEDVGLVSAGFGLDSHLVLLGIYSH
Ga0068470_12978082	3300006308	Marine	LAFLYNSDYERGVPHLPQNFAVGFSGFPQLLQDGVVDFDSAGFLVGL*
Ga0068470_13148991	3300006308	Marine	LAFLYNSDYEYYCLEPHLPQNFAAGFSLVPQLLQDEDVSLISAGFR
Ga0068470_13644621	3300006308	Marine	LAFLYNSDYDCALPHLPQNFALGFIGLPQLVQNKTSLFFLD
Ga0068470_14119352	3300006308	Marine	LAFLYNSDYERGVPHLPQNFAAGFSGLPQLLQDEDVGLISAGFGLGL*
Ga0068471_11474176	3300006310	Marine	LTFLYNSDYEHGVPHPPQNFAVGFSGFPQLLQDEDVGLVSAGFGLGL*
Ga0068472_103503202	3300006313	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEDVSFFSAGFLATYLLSY
Ga0068472_103628444	3300006313	Marine	LAFLYNSDYERWVPHPPQNFAVFFSEFPQFSQNAEVSFFFAGF
Ga0068472_103735151	3300006313	Marine	LAFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDVS
Ga0068472_103760964	3300006313	Marine	LVFLYKSDYERWVPHLPQNFAVGFSLAPQLLQDEDVGFDNTP
Ga0068472_104314412	3300006313	Marine	LAFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDVSFFSAGFLATYLI
Ga0068472_104365001	3300006313	Marine	LAFLYNSDYERWVPHLPQNFAVGFSGFPQLLQDEDV
Ga0068472_104862313	3300006313	Marine	LAFLYNSDFEYYCLEPHLPQNFAAGFSLAPQLLQDEGVSLISAGFRVG
Ga0068472_105100662	3300006313	Marine	LAFLYNSDYEYYCLEPHLPQNFAAGFSLAPQLLQDEDVSLI
Ga0068472_105657211	3300006313	Marine	LAFLYNSDYERGVPHLPQNFAVGFSEAPQLLQDEGVSFFSAGFCLAGF
Ga0068473_13895221	3300006316	Marine	LAFLYNSDYERWVPHPPQNFVVGFSVFPQLLQDEDVCLVSDDFGLGSILCLDRY
Ga0068473_15184201	3300006316	Marine	LAFLFNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVGLVSAGFRLG
Ga0068473_16350891	3300006316	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGFGL
Ga0068497_10686198	3300006323	Marine	LAFLYNSDYERGVPHPPQNFAFGFSGFPQLLQDEDVGRVSAGLRVGFDLVLLGT
Ga0068497_11090431	3300006323	Marine	LAFLYNSDYECYCFDPHLPQNFAVGFSGFPQLLQDGVVD
Ga0068476_14039001	3300006324	Marine	LAFLYNRDYEGYCFEPHLPQNFAVGFSGFPQLLQDEDVCLASAGFGLG
Ga0068501_15006542	3300006325	Marine	LAFIYNSDYERGVPHPPQNFAVGFSGFPQLLQDEGVGLVSAGFGL
Ga0068477_12385004	3300006326	Marine	LAFLYNSDYERGVPHLPQNFAVGFSEAQQLPQDEDVCLVSADF
Ga0068477_14942192	3300006326	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEDVCLASAGFRLGFDLVLLGIGS
Ga0068483_13383521	3300006330	Marine	LAFLYNSDYERGVPHPPQNFAVGFSLAPQLLQDKAVGIVSAGFRVGL*
Ga0068483_15917522	3300006330	Marine	LAFLYYSDYERGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAG
Ga0068488_13225393	3300006331	Marine	LAFLYNSDYERWVPHPPQNFAVGFRGLPQLLQDEDVGLVSAGFGLG
Ga0068488_13509172	3300006331	Marine	LAFLYNSDYERGVPHLPQNFAVGFSEAPQLPQDEDVFLV
Ga0068488_13530331	3300006331	Marine	LAFLYNSDYERWVPHPPQNFAVGFNLAPQLLQDKAVGIVS
Ga0068488_16762802	3300006331	Marine	LAFLYNSDYERCVPHPPQNFAAGFSGFPQLLQDEDAGLDSAGFGLGFCF
Ga0068480_11608141	3300006335	Marine	LAFLYNSDYGYYCLEPHLPQNFAAGFSLAPQLLQDEDVSLISAGFRVGFSPCLR
Ga0068480_13240981	3300006335	Marine	LAFLYNSDYDRGVPHPPQNFAIGFSGFPQLLQDEDVSF
Ga0068480_13261611	3300006335	Marine	LAFLYNSDYERGVPHLPQNFAVGFSGFPQLLQDGVVDVGDI
Ga0068480_13709072	3300006335	Marine	LVFIYNSDYERGVPHLPQNFAVSFSGFPQLLQDEDVCLVS
Ga0068480_13834532	3300006335	Marine	LTFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDED
Ga0068480_17908281	3300006335	Marine	LAFIYNSDYEREVPHCPQNFASGFSGFPQLLQDDDVSFFSAGFGLGF
Ga0068502_13592691	3300006336	Marine	LVFLYNSDYERGVPHPPQNFAAGFSGFPQLLQDEGVGLVSAGFGLGL*
Ga0068502_13612492	3300006336	Marine	LAFLYNSDYERLVPHPPQNFAFGFSGFPQLLQDEGVGL
Ga0068502_13714982	3300006336	Marine	LAFLYNSDYERGVPHPPQNFAAGFSGLPQLLQDEDVDLVSAGFGLGL*
Ga0068502_19308791	3300006336	Marine	LAFLNNRDYEREVPHPPQNFAVGFSGFPQLLQDEDVG
Ga0068482_13160455	3300006338	Marine	LAFLYNSDYERGVPHLPQNFAVGFSGLPQLLQDEDVCLVSAGF
Ga0068482_13274991	3300006338	Marine	LVFLYNSDYERGVPHLPQNFAVGFSEAPQLPQDEDVCLVSANFGLGSILCLDRCW
Ga0068482_13358993	3300006338	Marine	LAFLYNSDYEYYCLEPHLPQNFAAGFSLVPQLLQDEDVSLI
Ga0068482_13519721	3300006338	Marine	LAFLYNSDYERGVPHPPQNFAVGFSLVPQLLQDEDVSFFSAGFLA
Ga0068482_14688042	3300006338	Marine	LAFLYNSDYERGVPHLPQNFAVGFSEAPQLPQDEDVCLVSADFGLGSILCLDRY
Ga0068482_14736831	3300006338	Marine	LAFIYNSDYERGVPHPPQNFAFGFSGFPQLLQDEDVSFFFAGFGLGFCFARY
Ga0068482_18507931	3300006338	Marine	LAFLYNSDYERGVPHLPQNFAVGFSGFPQLLQDEDVSLVSAGFGQVFDLVFVGIG
Ga0068503_104608601	3300006340	Marine	LAFLYNSDYERGVPHSPQNLASGFSDFPQFLQNADVSFFSA
Ga0068503_104944782	3300006340	Marine	LAFLYNSDYEHGVPHPPQNFAVGFSGFPQLLQDEDVGRVSAGH
Ga0068503_105608591	3300006340	Marine	LAFLYNSDYECYCFDPHLPQNFAVGFSGLPQLLQDEDVGLVSAGFG
Ga0068503_106050841	3300006340	Marine	LAFLYNSDYEHGVPHPPQNFAVGFSGFPQLLQDEDVGR
Ga0068493_104156337	3300006341	Marine	LAFLYNSDYERGVPHPPQNFAVGFSDFPQLLQDEDVSFFSAGLRAG
Ga0068493_104675911	3300006341	Marine	LAFLYNSDYERWVPHPPQNFAVGFSGFPQLLQDEDVGFVSAGFGLDSTSCF
Ga0068493_105951564	3300006341	Marine	LVFLYNSDYERGVPHPPQNFAAGFSGLPQLLQDEDV
Ga0068493_106272303	3300006341	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGFGLGFDLVLLGIG
Ga0068493_106581321	3300006341	Marine	LAFLYNSDYERGVPHPPQNFAVGFNDFPQFSQNADVSFFS
Ga0068493_107631942	3300006341	Marine	LAFIYNSDYERGVPHLPQNFAVGFSGFPQLLQDEDVCLVSAG
Ga0099695_11359052	3300006344	Marine	LAFLYNSDYERGLPHLPQNFAVGFSGLPQLLQDEDVCLVSAGFGLGL*
Ga0099696_13031952	3300006346	Marine	LAFLYNSDYERGAPHLPQNFAVGFSGLPQLLQDEDVCLVSAGFGLGL*
Ga0099696_13359581	3300006346	Marine	LVFLYNSDYERGVPHLPQNFAVGFSGFPQLLQDEDVGLVSAGFGLG
Ga0099696_13618441	3300006346	Marine	LAFLYNSDYECYCFDPHLPQNFAVGFSGLPQLLQDEDICLVSAGFGLGL
Ga0099697_11047449	3300006347	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEGVCLVSADFGLGSI
Ga0099697_12109621	3300006347	Marine	LAFLYNSDYERGVPHLPQNFAFGFSLFPQLLQDEDVCLASAGFGLGL*
Ga0099697_12188781	3300006347	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEDVFFTK
Ga0099697_14047764	3300006347	Marine	LAFLYNSDYERWVPHPPQNFAVGFNLAPQLLQDKAVGIVSAGFRVG
Ga0099697_14199572	3300006347	Marine	LAFLYNSDYEYYCLEPHLPQNFAADFSLAPQLLQDEGVSL
Ga0099957_10573725	3300006414	Marine	LVFIYNSDYEHLVPHPPQNFAVGFSGLPQLLQDEDIGLVSAGLRVGL*
Ga0099957_12469061	3300006414	Marine	LAFLYNSDYEREVPHPPQNFASGFSGFPQLLQDEDVSFFFAGFGLGFCF
Ga0099957_15499322	3300006414	Marine	LAFLYNSDYERGVPHPPQNFVVGFSGFPQLLQDEDV
Ga0100043_106651673	3300006416	Marine	LAFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDVSFFSAGFLA
Ga0099958_11651502	3300006567	Marine	LAFLYNSDYERGVPHLPQNFAVGFSEAPQLPQDEDVCLVSA
Ga0099958_12470902	3300006567	Marine	LAFLYNSDYELGVPHPPQNFAVGFSGFPQFSQNADVSFFSTGFCL
Ga0099958_12919302	3300006567	Marine	LAFLYNSDYERGVPHLPQNFAAGFSGLPQLLQDEDVGLISAGFG
Ga0099958_12960832	3300006567	Marine	LAFLYNSDYCFAPHLPQNFAVGFSLAPQLSQNEDVGLV
Ga0099958_13012453	3300006567	Marine	LAFLYNSDYERGVPHLPQNFAVGFSGFPQLLQDEDVSLVSAGFGLGL*
Ga0066376_107208721	3300006900	Marine	YDLAFLYNSDYEHGVPHPPQNFAVGFSGLPQLLQDEDVGLDSAGLRVGL*
Ga0066372_106389622	3300006902	Marine	LAFLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEDVGLVSAGL
Ga0066372_106727541	3300006902	Marine	LAFLYNSDYEREVPHLPQNFASGFSGFPQLLQDEDVSFFSAGFCLAGFS
Ga0099959_11397731	3300007160	Marine	LAFLYNSDYEHGVPHLPQNFAVGFSGFPQLLQDEDVGLVSAGLRVGL*
Ga0099959_12598542	3300007160	Marine	LAFLYNSDYECYCFEPHLPQNFAVGFSEAPQLPQDEDVCLVSAGF
Ga0099959_12769352	3300007160	Marine	LVFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDVS
Ga0099959_13210052	3300007160	Marine	LAFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDV
Ga0105020_11413961	3300007514	Marine	LAFLYNSDYCFAPHLPQNFAVGFSGFPQLSQEEDVSVSLGLFLANS
Ga0105359_104451092	3300008251	Methane Seep Mesocosm	LAFLYNSDYERGVPHPPQNFAAGFSGFPQLLQDEDVCLVSAGFGLGL*
Ga0105351_11811571	3300008254	Methane Seep Mesocosm	LAFLYNSDYERGVPHLPQNFASGFSGFPQLLQGEDVSFFFAG
Ga0117920_10663253	3300009108	Marine	LAFLYNSDYEREVPHLPQNFAVGFSGFPQLLQDEDVGLVSAGFLVGL*
Ga0117922_11571221	3300009109	Marine	LAFLYNSDYERLVPHPPQNFAVGFSGFPQLLQDEDVCLVSA
Ga0114996_105714721	3300009173	Marine	LVFLYNSDYELGVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGLRVG
Ga0117926_10542763	3300009335	Marine	LAFLYNSDYERLVPHPPQNFAVGFSGFPQLLQDEDVCLVSAGLLLGLCSCLRRY
Ga0117928_10330841	3300009339	Marine	LAFLYNSDYCFAPHLPQNFAVGFSGFPQLLQDEGVGLDS
Ga0114932_108577731	3300009481	Deep Subsurface	LAFIYNSDYERGVPHPPQNFAIGFSGFPQFSQNADVSFFSAGF
Ga0138358_10219472	3300011320	Marine	FLYNSDYERGVPHPPQNFAVGFSGLPQLLQDEDVGRVSAGLRVGL*
Ga0138361_10986791	3300011321	Marine	LVFLYNSDYERCVPHPPQNFAVGFSGFPQLLQDEDV
Ga0163108_111283992	3300012950	Seawater	LAFLYNSDYCFDPHLPQNFAVGFSGFPQLLQDEDVGIVSAGLRVGL*
Ga0181432_10893381	3300017775	Seawater	LVFLYNSDYEREVPHPPQNFAVGFSDFPQLSQNADVSFLVFKP
Ga0211575_100184771	3300020407	Marine	LTFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVGRVSAGFGLGL
Ga0211691_103184551	3300020447	Marine	LAFLYNSDYEHGVPHPPQNFAFGFSGFPQLLQDEDVGLVSAGFGL
Ga0211642_101685651	3300020449	Marine	LAFLYNSDYERGVPHLPQNFASGFSDFPQFSQNTDVSFFSAGF
Ga0211697_101449812	3300020458	Marine	LTFLYNSDYEHGVPHSPQNFAIGFSGFPQLLQDEDVGLVSAGFGLGL
Ga0206679_106748011	3300021089	Seawater	LAFLYNSDYEHELPHLPQNFAVGFSGFPQLLQDGVVDFDSAGFLV
Ga0206681_102221752	3300021443	Seawater	LTFLYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVGRVSAGF
Ga0232635_11165962	3300021973	Hydrothermal Vent Fluids	LAFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDVSFFSAGFLATYLLS
Ga0232639_13631321	3300021977	Hydrothermal Vent Fluids	LAFLYNSDYEHVVPHPPQNFAVGFSGLPQLLQDEDVC
Ga0207966_11188061	3300026119	Marine	LAFLYNSDYELGAPHPPQNFAVGFSGLPQLLQDEDVGLVSAGLRVGL
Ga0208879_12655901	3300026253	Marine	LVFLYNSDYERGVPHLPQNFAVGFSLVPQLLQDEDVSFFSAGFL
Ga0257108_11061702	3300028190	Marine	LAFLYNSDYEHGVPHPPQNFAVGFSGFPQLLQDEDVG
Ga0302119_101185652	3300031606	Marine	LAFIYNSDYERGVPHSPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGFCFAMYFS
Ga0302119_102358492	3300031606	Marine	LAFIYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGF
Ga0302120_103499461	3300031701	Marine	LAFIYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGFCFAMYFSS
Ga0310121_100873771	3300031801	Marine	LAFIYNSDYERGVPHSPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGFCFAMYFSSY
Ga0310121_101580661	3300031801	Marine	LAFIYNSDYERGVPHSPQNFAVGFSGFPQLLQDEDVSFFSADFCLAGFC
Ga0310121_106665202	3300031801	Marine	LAFLYNSDYEREVPHLPQNFAAGFSGLPQLLQDEDVGLVSAGLRVGL
Ga0310120_100193151	3300031803	Marine	LAFIYNSDYERGVPHSPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGF
Ga0310120_102439472	3300031803	Marine	LAFIYNSDYERGVPHSPQNFAVGFSGFPQLLQDEDVSFFSADFCLAG
Ga0310120_103702871	3300031803	Marine	LAFIYNSDYERGVPHPPQNFAVGFSGFPQLLQDEDVSFFSAGFCLAGFCFAMYLSSYS
Ga0315319_102983011	3300031861	Seawater	LTFLYNSDYEHGVPHPPQNFAVGFSGFPQLLQDEDVGLVSAGFGLGL
Ga0315318_103475632	3300031886	Seawater	LTFLYNSDYERGVPHLPQNFAVGFSGLPQLLQDEDVGLVSAGLRVG
Ga0315333_103961122	3300032130	Seawater	LAFLYNSDYEREVPHLPQNFASGFSGFPQLLQDEDVSFFSAGFCLAGFSFARYFS
Ga0315334_106195122	3300032360	Seawater	LAFLYNSDYEHLVPHPPQNFAVGFSGFPQLLQDEGVGLVSAGFGLGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences