Metagenome / Metatranscriptome Family F060948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	80 residues
Representative Sequence	VVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD
Number of Associated Samples	100
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	16.79 %
% of genes near scaffold ends (potentially truncated)	45.45 %
% of genes from short scaffolds (< 2000 bps)	87.88 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Eukaryota (95.455 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (18.939 % of family members)
Environment Ontology (ENVO)	Unclassified (37.879 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (49.242 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.81% β-sheet: 0.00% Coil/Unstructured: 40.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13631	Cytochrom_B_N_2	5.34
PF00032	Cytochrom_B_C	2.29
PF00146	NADHdh	2.29
PF00329	Complex1_30kDa	1.53
PF00361	Proton_antipo_M	1.53
PF00662	Proton_antipo_N	0.76
PF00033	Cytochrome_B	0.76
PF00578	AhpC-TSA	0.76
PF00252	Ribosomal_L16	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	3.05
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	2.29
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	2.29
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	1.53
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.53
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	1.53
COG0197	Ribosomal protein L16/L10AE	Translation, ribosomal structure and biogenesis [J]	0.76

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	95.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.79 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	95.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.79 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	95.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.79 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	95.45 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	3.79 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	95.45 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	3.79 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Oligohymenophorea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	37.12 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3.79 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000553\|TBL_comb47_HYPODRAFT_10003588	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	18264	Open in IMG/M
3300001199\|J055_10068649	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1464	Open in IMG/M
3300001352\|JGI20157J14317_10046703	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	2042	Open in IMG/M
3300001352\|JGI20157J14317_10173903	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	642	Open in IMG/M
3300004121\|Ga0058882_1349221	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	948	Open in IMG/M
3300004642\|Ga0066612_1026422	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	6536	Open in IMG/M
3300004793\|Ga0007760_10042762	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1031	Open in IMG/M
3300004795\|Ga0007756_10036163	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	868	Open in IMG/M
3300004796\|Ga0007763_10070037	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	5834	Open in IMG/M
3300006357\|Ga0075502_1655449	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1356	Open in IMG/M
3300006383\|Ga0075504_1365838	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	636	Open in IMG/M
3300006417\|Ga0069787_10445298	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2677	Open in IMG/M
3300007233\|Ga0075178_1774262	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	663	Open in IMG/M
3300007244\|Ga0075167_10788322	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	801	Open in IMG/M
3300007304\|Ga0102689_1031422	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1650	Open in IMG/M
3300007319\|Ga0102691_1524267	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	798	Open in IMG/M
3300007651\|Ga0102900_1140213	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	531	Open in IMG/M
3300007992\|Ga0105748_10104414	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1135	Open in IMG/M
3300008572\|Ga0103775_104847	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	581	Open in IMG/M
3300008926\|Ga0103704_101880	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	902	Open in IMG/M
3300008927\|Ga0103705_102052	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	783	Open in IMG/M
3300008958\|Ga0104259_1005922	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1044	Open in IMG/M
3300008993\|Ga0104258_1002922	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	3051	Open in IMG/M
3300008993\|Ga0104258_1043840	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	838	Open in IMG/M
3300008993\|Ga0104258_1079225	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	613	Open in IMG/M
3300009026\|Ga0102829_1140422	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	769	Open in IMG/M
3300009141\|Ga0102884_1142238	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	607	Open in IMG/M
3300009154\|Ga0114963_10303200	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	889	Open in IMG/M
3300009419\|Ga0114982_1093016	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	933	Open in IMG/M
3300009434\|Ga0115562_1069898	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1476	Open in IMG/M
3300009436\|Ga0115008_10998383	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	624	Open in IMG/M
3300009450\|Ga0127391_1017913	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1469	Open in IMG/M
3300009467\|Ga0115565_10087926	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1476	Open in IMG/M
3300009495\|Ga0115571_1077488	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1476	Open in IMG/M
3300009505\|Ga0115564_10007294	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	8485	Open in IMG/M
3300009505\|Ga0115564_10007294	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	8485	Open in IMG/M
3300009543\|Ga0115099_10779334	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1360	Open in IMG/M
3300009543\|Ga0115099_10937485	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1405	Open in IMG/M
3300009592\|Ga0115101_1021545	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	962	Open in IMG/M
3300009593\|Ga0115011_11770014	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	556	Open in IMG/M
3300009593\|Ga0115011_11853627	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	546	Open in IMG/M
3300009608\|Ga0115100_10110070	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1130	Open in IMG/M
3300009677\|Ga0115104_10048856	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	550	Open in IMG/M
3300009677\|Ga0115104_10394159	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1596	Open in IMG/M
3300009677\|Ga0115104_10532757	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	544	Open in IMG/M
3300009677\|Ga0115104_10837854	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1031	Open in IMG/M
3300009677\|Ga0115104_11134746	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1079	Open in IMG/M
3300009679\|Ga0115105_10127029	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	520	Open in IMG/M
3300009679\|Ga0115105_10139386	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1170	Open in IMG/M
3300009679\|Ga0115105_10280272	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1174	Open in IMG/M
3300009679\|Ga0115105_10316130	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1575	Open in IMG/M
3300009679\|Ga0115105_10431961	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1859	Open in IMG/M
3300009679\|Ga0115105_10593637	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	518	Open in IMG/M
3300009679\|Ga0115105_10729634	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1443	Open in IMG/M
3300009679\|Ga0115105_10761686	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	847	Open in IMG/M
3300009679\|Ga0115105_10957891	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	615	Open in IMG/M
3300009679\|Ga0115105_10967267	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1414	Open in IMG/M
3300009679\|Ga0115105_11052500	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1093	Open in IMG/M
3300009679\|Ga0115105_11193073	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1028	Open in IMG/M
3300009679\|Ga0115105_11309127	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	533	Open in IMG/M
3300009679\|Ga0115105_11417396	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1334	Open in IMG/M
3300009754\|Ga0123364_1113975	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	869	Open in IMG/M
3300009861\|Ga0132184_100401	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	774	Open in IMG/M
3300009868\|Ga0130016_10739736	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	594	Open in IMG/M
3300009870\|Ga0131092_10036829	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	7235	Open in IMG/M
3300010129\|Ga0123376_1041962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	525	Open in IMG/M
3300011012\|Ga0150979_1133039	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	656	Open in IMG/M
3300011291\|Ga0138395_190673	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	766	Open in IMG/M
3300011381\|Ga0102688_1548148	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	980	Open in IMG/M
3300011426\|Ga0151147_1334045	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1406	Open in IMG/M
3300012020\|Ga0119869_1012863	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	3107	Open in IMG/M
3300012020\|Ga0119869_1082261	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1009	Open in IMG/M
3300012212\|Ga0150985_104387938	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1256	Open in IMG/M
3300012212\|Ga0150985_104602923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1360	Open in IMG/M
3300012212\|Ga0150985_110147411	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1115	Open in IMG/M
3300012212\|Ga0150985_111665225	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	591	Open in IMG/M
3300012212\|Ga0150985_111686656	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	503	Open in IMG/M
3300012212\|Ga0150985_121562477	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	587	Open in IMG/M
3300012370\|Ga0123369_1034088	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	621	Open in IMG/M
3300012418\|Ga0138261_1241231	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	593	Open in IMG/M
3300012469\|Ga0150984_101250243	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1488	Open in IMG/M
3300012469\|Ga0150984_118877416	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1244	Open in IMG/M
3300012469\|Ga0150984_121585089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1391	Open in IMG/M
3300012694\|Ga0157559_1001688	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	665	Open in IMG/M
3300012701\|Ga0157562_1164698	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	680	Open in IMG/M
3300012707\|Ga0157623_1222536	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	938	Open in IMG/M
3300012715\|Ga0157599_1237621	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1115	Open in IMG/M
3300012723\|Ga0157604_1173929	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	927	Open in IMG/M
3300012726\|Ga0157597_1291925	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1165	Open in IMG/M
3300012754\|Ga0138278_1111902	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1486	Open in IMG/M
3300012755\|Ga0138281_1151054	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	644	Open in IMG/M
3300012763\|Ga0138289_1190976	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2212	Open in IMG/M
3300012772\|Ga0138287_1065449	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1437	Open in IMG/M
3300012772\|Ga0138287_1227701	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	877	Open in IMG/M
3300012778\|Ga0138269_1359253	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	609	Open in IMG/M
3300012781\|Ga0138286_1424111	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	920	Open in IMG/M
3300012968\|Ga0129337_1122026	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2308	Open in IMG/M
3300012970\|Ga0129338_1373360	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	615	Open in IMG/M
3300013295\|Ga0170791_13019584	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1569	Open in IMG/M
3300016737\|Ga0182047_1104657	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	709	Open in IMG/M
3300018416\|Ga0181553_10356202	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	803	Open in IMG/M
3300018610\|Ga0188884_1011887	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	569	Open in IMG/M
3300018640\|Ga0188880_1000027	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	8794	Open in IMG/M
3300018840\|Ga0193200_1130028	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	964	Open in IMG/M
3300018983\|Ga0193017_10181518	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	677	Open in IMG/M
3300019207\|Ga0180034_1182138	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	608	Open in IMG/M
3300019232\|Ga0180114_1105197	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	574	Open in IMG/M
3300020014\|Ga0182044_1319480	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	543	Open in IMG/M
3300020070\|Ga0206356_10121492	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	566	Open in IMG/M
3300020078\|Ga0206352_10930610	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	894	Open in IMG/M
3300020728\|Ga0214202_1001562	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	7265	Open in IMG/M
3300021355\|Ga0206690_10902376	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	554	Open in IMG/M
3300021861\|Ga0213853_11220013	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	613	Open in IMG/M
3300022367\|Ga0210312_119468	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	535	Open in IMG/M
3300022925\|Ga0255773_10264110	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	727	Open in IMG/M
3300024481\|Ga0256330_1135199	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	520	Open in IMG/M
3300024483\|Ga0255224_1123021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	545	Open in IMG/M
3300025809\|Ga0209199_1007421	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	8918	Open in IMG/M
3300025880\|Ga0209534_10481867	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	515	Open in IMG/M
3300028085\|Ga0255255_1031451	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	906	Open in IMG/M
3300028089\|Ga0255299_1093700	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	563	Open in IMG/M
3300028112\|Ga0256335_1173364	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	560	Open in IMG/M
3300028261\|Ga0256316_1093345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	525	Open in IMG/M
3300030545\|Ga0210271_10055596	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	505	Open in IMG/M
3300031058\|Ga0308189_10040772	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1237	Open in IMG/M
3300031136\|Ga0315837_1035988	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	601	Open in IMG/M
3300032145\|Ga0315304_1104972	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	746	Open in IMG/M
3300032466\|Ga0214503_1247472	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	552	Open in IMG/M
3300032915\|Ga0314749_1118918	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	564	Open in IMG/M
3300034021\|Ga0335004_0263359	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1039	Open in IMG/M
3300034117\|Ga0335033_0204533	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1063	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.61%
Host-Associated	Host-Associated	9.09%
Engineered	Engineered	5.30%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	80.30%
Plants	Host-Associated → Plants	8.33%
Terrestrial	Environmental → Terrestrial	5.30%
Wastewater	Engineered → Wastewater	5.30%
Mammals	Host-Associated → Mammals	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	49.24%
Freshwater	Environmental → Aquatic → Freshwater	30.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Soil	Environmental → Terrestrial → Soil	3.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge	3.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.27%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	2.27%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.52%
Unclassified	Environmental → Aquatic → Unclassified	0.76%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Digestive System	Host-Associated → Mammals → Digestive System	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.70%
Lake	Environmental → Aquatic → Freshwater → Lake	14.39%
Oceanic	Environmental → Aquatic → Marine → Oceanic	11.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.82%
Pelagic	Environmental → Aquatic → Marine → Pelagic	5.30%
River	Environmental → Aquatic → Freshwater → River	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.55%
Coastal	Environmental → Aquatic → Marine → Coastal	3.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.03%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	3.03%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	1.52%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.52%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.76%
Pond	Environmental → Aquatic → Freshwater → Pond	0.76%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.76%
Loam	Environmental → Terrestrial → Soil → Loam	0.76%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	0.76%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.70%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	14.39%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	11.36%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.82%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.79%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.79%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.03%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	3.03%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	1.52%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.52%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.76%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	0.76%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	18.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.06%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.06%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.55%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.55%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.55%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.79%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.03%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.03%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	3.03%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.27%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	1.52%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	1.52%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.52%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.76%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.76%
Meromictic Pond	Environmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond	0.76%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.76%
Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Marine	0.76%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Elk Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Elk Feces	0.76%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.76%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.76%
Enhanced Biological Phosphorus Removal Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge → Enhanced Biological Phosphorus Removal Bioreactor	0.76%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001199	Lotic microbial communities from nuclear landfill site in Hanford, Washington, USA - IFRC combined assembly	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004642	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI047_10m_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004793	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004796	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006383	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006417	Combined Assembly of Gp0110018, Gp0110022, Gp0110020	Engineered	Open in IMG/M
3300007233	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007244	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007304	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007319	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007651	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008572	Microbial communities of Cyanobacterial mats from a recreation lake in Champs-sur-Marne, France - CSM2012-AB-F-N	Environmental	Open in IMG/M
3300008926	Microbial communities from freshwater in the western basin of Lake Erie, USA - 973-2	Environmental	Open in IMG/M
3300008927	Microbial communities from freshwater in the western basin of Lake Erie, USA - 973-3	Environmental	Open in IMG/M
3300008958	Marine microbial communities from eastern North Pacific Ocean - P1 particle-associated	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009754	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_198_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009861	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 3, 6m depth; RNA IDBA-UD	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010129	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_237_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011012	Marine surface microbial communities from Baltic Sea. Combined Assembly of 24 SPs	Environmental	Open in IMG/M
3300011291	Marine microbial communities from the Southern Atlantic ocean - KN S19 250_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011381	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011426	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung E36 Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Host-Associated	Open in IMG/M
3300012020	Activated sludge microbial communities from Shanghai, China - wastewater treatment plant - Activated sludge	Engineered	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012370	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_209_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012694	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012701	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES061 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012707	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012715	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012723	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES129 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012726	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES115 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012754	Freshwater microbial communities from Lake Montjoie, Canada - M_130821_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012755	Freshwater microbial communities from Lake Montjoie, Canada - M_140807_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012763	Freshwater microbial communities from Lake Simoncouche, Canada - S_140108_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012772	Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012778	Freshwater microbial communities from Lake Croche, Canada - C_130208_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012781	Freshwater microbial communities from Lake Simoncouche, Canada - S_130712_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300016737	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018610	Metatranscriptome of marine microbial communities from Baltic Sea - LD35M_ls2	Environmental	Open in IMG/M
3300018640	Metatranscriptome of marine microbial communities from Baltic Sea - GS859_ls5	Environmental	Open in IMG/M
3300018840	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_039 - TARA_N000000013 (ERX1782199-ERR1712136)	Environmental	Open in IMG/M
3300018983	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_138 - TARA_N000002997 (ERX1782408-ERR1712000)	Environmental	Open in IMG/M
3300019207	Estuarine microbial communities from the Columbia River estuary - R.871 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020014	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011503CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020728	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021355	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022367	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1161 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300024481	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024483	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300028085	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028089	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028112	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028261	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031136	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032145	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032915	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TBL_comb47_HYPODRAFT_100035886	3300000553	Freshwater	LVFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWVFTDKQLNSDTMIRLAYAHYVSAFFLTYLSLIHGVDMHYD*
J055_100686491	3300001199	Lotic	MFAFLILQVVVFLGLVLCCTHLSEITLTIAANIFHTFFAFKGKFYWWIFTDKQLNTDTIIRLAYAHYVAAFFLASLRWM*
JGI20157J14317_100467033	3300001352	Pelagic Marine	VVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT*
JGI20157J14317_101739031	3300001352	Pelagic Marine	VVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT*
Ga0058882_13492212	3300004121	Forest Soil	VFCGLILCCTHLSEITLTIAANILHTFFLFHGKFYWWVFTDKQLNTDTLIRLAYAHYLSAFYMLYLAIVHALDMHYD*
Ga0066612_10264222	3300004642	Marine	MFSFLIFHVVVFLGLVLCCTHLSEITLTIAANMMHTVFGFYGKPYWWLFTDRQLNTDTLIRLSYAHYLSAFYFAYLGYLHSLEMHYDWKTEATNDGLSYDLSW*
Ga0007760_100427622	3300004793	Freshwater Lake	VFTFLIFQVVVFLGLVLCCTHLSDITLTIAANILHTFFLFKGKFYWWFFTDKQLNTDTVIRLAYAHYIVAFYLGYLGLIHGIDMHYD*
Ga0007756_100361631	3300004795	Freshwater Lake	MKQLEKVVFSFLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGNFIDVFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMIMIEKNETVFDGLETEMVWWDEAFANELSG
Ga0007763_1007003711	3300004796	Freshwater Lake	VFSFLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0075502_16554492	3300006357	Aqueous	VFQVVVFLGLVLCCTHLSEITLTIAANIMHTFFGFYGKPYWWIFTDRQLNTDTLIRLAYAHYLSAFYLTFIAALHSFDMHYD*
Ga0075504_13658382	3300006383	Aqueous	LCCTHLSEITLTIAANIMHTFFGFYGKPYWWIFTDRQLNTDTLIRLAYAHYLSAFYLTFIAALHSFDMHYD*
Ga0069787_104452981	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	LLAQVVIFLGLVLCATHLSDITLTIASNAFHTFCFFIGKLYWLVFTDQTLNSDTMTRLAYLHYTLAFVLGYLGVFHGVDMHYD*
Ga0075178_17742622	3300007233	Wastewater Effluent	VFLGLVLCCTHLSDVTLTIAKNAFRTFFLFIGKVEWLVLTDGMLNSDTVIRLAYAHYVVAFFLAFLGLSHGIDMHYD*
Ga0075167_107883221	3300007244	Wastewater Effluent	LIIQLTVFLGLVLCCTHLSDITLTIAKNAFRTFFLFIGKLEWLIFTDGALNSDTVIRLAYAHYVVAFFLAFLGLVHGIDMHYD*
Ga0102689_10314222	3300007304	Freshwater Lake	MILQVVTFFGLVLCCTHLSEITLTIAANIMHTFFLFHGKFYWWIFTDKTLNSDTMVRLAYAHYVSAFYMAYLGVLHSIDMHYD*
Ga0102691_15242671	3300007319	Freshwater Lake	SEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0102900_11402131	3300007651	Estuarine	IFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0105748_101044141	3300007992	Estuary Water	VFSFLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT*
Ga0103775_1048471	3300008572	Freshwater Lake	ITLIIAVNIMNTFFLNLGKFYWWLFTDKNLNSDTLIRLAYGHYVSAFFLFYLGVLHSFDMHYD*
Ga0103704_1018801	3300008926	Lake Water	LCCTHLSDVTLTIAKNAFRTFFLFIGKVEWLLFTDGMLNSDTVIRLAYAHYVVAFYLFFLGLSHGIDMHYD*
Ga0103705_1020521	3300008927	Lake Water	FAFLIIQLTVFLGLVLCCTHLSDVTLTIAKNAFRTFFLFIGKVEWLLFTDGMLNSDTVIRLAYAHYVVAFYLFFLGLSHGIDMHYD*
Ga0104259_10059221	3300008958	Ocean Water	MFSFLIFQVVVFLGLVLCCTHLSEITLTIAANVMHTAFGFYGKPYWWLFTDKQLNTDTLIRLAYAHYLSAFYFAYLGFLHSLEMHYDWKTESTNDGLTYDMSW*
Ga0104258_10029222	3300008993	Ocean Water	VVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYD*
Ga0104258_10438401	3300008993	Ocean Water	TLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYD*
Ga0104258_10792252	3300008993	Ocean Water	FLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFY*LFTDKQLNSDTMVRLAYAHYLAAFF
Ga0102829_11404221	3300009026	Estuarine	VVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0102884_11422381	3300009141	Estuarine	VFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0114963_103032003	3300009154	Freshwater Lake	GVFSFLVFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0114982_10930163	3300009419	Deep Subsurface	VVFFGLVLCCTHLSEITLTIAANIFHTFFMFKGKAYWFLFTDKQLNTDTLIRLAYAHYVSAFYLSFLGLLHGVDIHYDWKNESFYDGLSSEML*
Ga0115562_10698981	3300009434	Pelagic Marine	SFLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT*
Ga0115008_109983831	3300009436	Marine	TTLFGLILCSTHLSDVTLTIAANFITTFLSLGKLYWWVFTDKTLNCDTLIRLAYLHYVVAFYLSFLALSHSLDMHYD*
Ga0127391_10179133	3300009450	Meromictic Pond	VFSFLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLG
Ga0115565_100879262	3300009467	Pelagic Marine	VVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYA
Ga0115571_10774882	3300009495	Pelagic Marine	FLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT*
Ga0115564_100072947	3300009505	Pelagic Marine	VFSFLIFQAAVFLGLALCCTHLSEITLTIAANIMHTFFFFYGKLYWWLFTDKQFCSDTLIRLAYGHYVVAFCLGYASFIHTIDIHYDWKNKTAMDGMAANLT*
Ga0115564_100072948	3300009505	Pelagic Marine	VFSFLVFQVVVFFGLALCCTHLSEITLIIAANIMHIFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFCLGYASFIHTIDMHYDWKNETSMDNMAANLT*
Ga0115099_107793342	3300009543	Marine	LVLCCTHLSEITLTIAANILHTFFDFKGKAYWWIFTDKQLNTDTTIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115099_109374851	3300009543	Marine	MGLVLCCTHLSEITLTIAANIMHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYAGLIHGIDMHYD*
Ga0115101_10215451	3300009592	Marine	MIFQVVVFLGLVLCCTHLSEITLTIAANVFHTFFLFYGKFYWWVFTDKQLNSDTMVRLAYAHYLAAFFLTYLSLLHGIDMHYD*
Ga0115011_117700141	3300009593	Marine	VLCCTHLSEITLTIAANILHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMA
Ga0115011_118536271	3300009593	Marine	SEITLTIAANIVHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115100_101100701	3300009608	Marine	VLCGTHLSEITLTIAANILHTFFFFKGKFYWWLFTDKQLNTDTLIRLAYAHYLAAFYMAYLGLIHGVDMHYD*
Ga0115104_100488562	3300009677	Marine	VVFFGLVLCCTHLSEITLTIAANIIHTFVDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115104_103941591	3300009677	Marine	LIFQAAVFLGLVLCCTHLSEITLTIAANIIHTFLDFKGKPYWWIFTNKQLNSDTMVRLAYAHYLVAFFMAYLGLIHGIDMHYD*
Ga0115104_105327571	3300009677	Marine	VSFFFGLVLCCTHLSEITLTIAANIMHTITNFKGKPYWWIFTDKQLNTDTMIRLAYLHYLLAFFMAYLGLIHGIEMHYDWKNETSFDGVDAEMAY*
Ga0115104_108378541	3300009677	Marine	TFLVFQAVVFMGLVLCCTHLSEITLTIAANIMHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYAGLIHGIDMHYD*
Ga0115104_111347462	3300009677	Marine	VLCCTHLSEITLTIAANILHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_101270291	3300009679	Marine	HLSEITLTIAANIMHTFFNFKGKPYWWIFTDKQLSTDTMVRLAYGHYLAAFFMFYLGLIHGIDMHYDWKNETTFDGIDTEMTW*
Ga0115105_101393862	3300009679	Marine	VFFGLVLCCTHLSEITLTIAANILHTFFDFKGKAYWWIFTDKQLNTDTTIRLAYGHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_102802721	3300009679	Marine	VFTFLIFQVVVFFGLVLCCTHLSEITLTIAANVLHTAFNFKGKAYWWLFTNKQLNTDTMVRLAYLHYLSAFFMFYLGLIHGIDMHYD*
Ga0115105_103161301	3300009679	Marine	MGLVLCCTHLSEITLTIAANIMHTAFNFKGKPYWWLFTDKSLSADTMVRLAYVHYLSAFFMFYLGLIHGIDMHYD*
Ga0115105_104319611	3300009679	Marine	VVFFGLVLCCTHLSEITLTIAANILHTFLDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_105936372	3300009679	Marine	MFSFLIFMVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKTYWWIFTDKQLNSDTLIRLAFAHYVSAFFLVYL
Ga0115105_107296342	3300009679	Marine	MGLVLCCTHLSEITLTIAANILHTFFNFKGKAYWWLFTDKQLNTDTMVRLAYCHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_107616861	3300009679	Marine	HLSEITLTIAANIMHTAFDFKGKAYWWIFTDKQLSCDSMIRLAYGHYLAAFFMAYLGLIHGIDMHYD*
Ga0115105_109578912	3300009679	Marine	MGLVLCCTHLSEITLTIAANILHTFFDFKGKAYWWLFTDKQLNTDTTVRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_109672672	3300009679	Marine	LCCTHLSEITLTIAANILHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_110525001	3300009679	Marine	LCCTHLSEITLTIAANILHTIFNFKGKAYWWIFTDKQLNTDTMVRLAYAHYLAAFFMLYLGIIHGIDMHYD*
Ga0115105_111930731	3300009679	Marine	VVFFGLVLCCTHLSEITLTIAANILHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHYLLAFFMAYLGLIHGIDMHYD*
Ga0115105_113091271	3300009679	Marine	VFTFLIFQAVVFFGLVLCCTHLSEITLTIAANIVHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYAHY
Ga0115105_114173962	3300009679	Marine	VFFGLVLCCTHLSEITLTIAANILHTAFAFKGKAYWWLFTDKQLNTDTMVRLAYAHYLLAFFMAYLGLIHGIDMHYDWKNETSFDGLDAEMVW*
Ga0123364_11139751	3300009754	Marine	VVVFLGLVLCCTHLSEITLTISANIMHTFFLFYGKFYWWLFTDKQLNADTLIRLAYAHYLSAFFLFYVGLLHGIDVHHD*
Ga0132184_1004011	3300009861	Meromictic Pond	VFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT*
Ga0130016_107397361	3300009868	Wastewater	LAQVVIFLGLVLCATHLSDITLTIASNAFHTFCFFIGKLYWLVFTDQTLNSDTMTRLAYLHYTLAFVLGYLGVFHGVDMHY
Ga0131092_100368294	3300009870	Activated Sludge	LFLLAQVVIFLGLVLCATHLSDITLTIASNAFHTFCFFIGKLYWLVFTDQTLNSDTMTRLAYLHYTLAFVLGYLGVFHGVDMHYD*
Ga0123376_10419621	3300010129	Marine	MIFQVVVFLGLVLCCTHLSEITLTIAANVFHTFFLFYGKFYWWVFTDKQLNSDTMVR
Ga0150979_11330391	3300011012	Marine	VFSFLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAA
Ga0138395_1906733	3300011291	Marine	HLTFLIFQVVVFFGLVLCCTHLSEITLTIAANIMHTIFNFKGKAYWWIFTDKQLSTDTMIRLAYGHYLSAFFMAYLGLIHGIDMHYDWKNETSFDGIDAEMS*
Ga0102688_15481481	3300011381	Freshwater Lake	LTVFLGLVLCCTHLSDVTLTIAKNAFRTFVLFIGKLEWLILTDGMLNSDTVVRLSYAHYVVAFYLFFLGLSHGIDMHYD*
Ga0151147_13340453	3300011426	Elk Feces	MILQVVTFFGLVLCCTHLSEITLTIAANIMHTFFLFHGKVYWWIFTDKNLNTDTLIRLAYGHYVSAFYMAYLGVLHGIDMHYDWKNESTYDGLETEMS*
Ga0119869_10128631	3300012020	Activated Sludge	VFFGLVLCCTHLSEITLVIAVNAFKTFFLFIGKAYAWLFTDCSLSTDTLIRLAYLHYVVAFLLFLLGLCHGIDMHYD*
Ga0119869_10822611	3300012020	Activated Sludge	LSEITLVIAVNAFKTFFLFIGKAYAWLFTDCSLSTDTLIRLAYLHYVVAFLLFLLGLCHGIDMHYD*
Ga0150985_1043879381	3300012212	Avena Fatua Rhizosphere	MILQVVTFFGLVLCCTHLSEITLTIAANIMHTFFLFHGKFYWWIFTDKTLNSDTMIRLAYAHYVSAFYMAYLGVLHSIDMHYD*
Ga0150985_1046029232	3300012212	Avena Fatua Rhizosphere	MILQVVTFFGLVLCCTHLSEITLTIAANIMHTVFLFHGKFYWWIFTDKNLNTDTLIRLAYAHYLSAFYMAYLGLLHGIDMHYD*
Ga0150985_1101474112	3300012212	Avena Fatua Rhizosphere	MILQVVTFFGLVLCCTHLSEITLTIAANVVHTVFLFHGKFYWWIFTDKNLNTDTLIRLAYGHYLSAFYMAYLGLLHGIDMHYD*
Ga0150985_1116652251	3300012212	Avena Fatua Rhizosphere	VFAFLIIQATVFLGLVLCCTHLSDITLTIAKNAFRTFFLFIGHLEWLIFTDGALNSDTVIRLAYAHYVVAFLLALLGLIHGIDMHYD*
Ga0150985_1116866561	3300012212	Avena Fatua Rhizosphere	MILQVVTFLGLVLCCTHLSEITLTIAANILHTFFLFHGKFYWWIFTDKNLNTDTLIRLTYAHYLSAFYMGYLGLLHGIDMHYDWKNESSYDGLDPEMS*
Ga0150985_1215624772	3300012212	Avena Fatua Rhizosphere	MILQVVTFFGLVLCCTHLSEITLTIAANIMHTFFLFHGKVYWWIFTDKNLNTDTLIRLAYGHYVSAFYMAYLGLL
Ga0123369_10340881	3300012370	Marine	MIFQVVVFCGLILCCSHLSEITLTIAANIMHTFFLFYGKFYWWFFTDKQLNTDTLLRLAYAHYLSAFYLGYLGLLHGIDMHYDWKNESTYD
Ga0138261_12412311	3300012418	Polar Marine	VFQVVVFCGLVLCCTHLSEITLTIAANILHTFFFFYGKFYWWVFTDKTLNSDTVVRLAYAHYLSAFYLFYIALLHG
Ga0150984_1012502432	3300012469	Avena Fatua Rhizosphere	MGLVLCCTHLSEITLTIAANILHTFFLFKGKAYWWLFTDKQLNSDTVVRLAYVHYLSAFFMAYLGLIHGIDMHYD*
Ga0150984_1188774162	3300012469	Avena Fatua Rhizosphere	MILQVVTFFGLVLCCTHLSEITLTIAANIMHTFFLFHGKVYWWIFTDKNLNTDTLIRLAYGHYVSAFYMAYLGLLHGIDMHYD*
Ga0150984_1215850892	3300012469	Avena Fatua Rhizosphere	MILQVVTFFGLVLCCTHLSEITLTIAANVLHTVFLFHGKFYWWIFTDKNLNTDTLIRLAYAHYLSAFYMAYLGLLHGIDMHYD*
Ga0157559_10016882	3300012694	Freshwater	LGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWLFTDKQLNSDTMVRLAYAHYLSAFFLTYLSLIHGIDMHYD*
Ga0157562_11646981	3300012701	Freshwater	VFSFLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMVRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0157623_12225361	3300012707	Freshwater	LSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0157599_12376212	3300012715	Freshwater	LGLALCCTHLSDVTLTIAKNAFRTFFMFIGKVEWLIFTDGMLNSDTVIRLAYAHYVVAFFLAFLGLIHGIDMHYD*
Ga0157604_11739291	3300012723	Freshwater	VFSFLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTYKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0157597_12919252	3300012726	Freshwater	LTVFLGLVLCCTHLSDVTLTIAKNAFRTFFMFIGKVEWLIFTDGMLNSDTVIRLAYAHYVVAFFLAFLGLIHGIDMHYD*
Ga0138278_11119021	3300012754	Freshwater Lake	VFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLIHAVDMHYD*
Ga0138281_11510541	3300012755	Freshwater Lake	HLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0138289_11909764	3300012763	Freshwater Lake	VFSFLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWVFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0138287_10654492	3300012772	Freshwater Lake	VFSFLVFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0138287_12277011	3300012772	Freshwater Lake	LSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNTDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0138269_13592532	3300012778	Freshwater Lake	VVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0138286_14241111	3300012781	Freshwater Lake	LVLRCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMIRLAYAHYLSAFFLTYLSLLHAVDMHYD*
Ga0163179_120303461	3300012953	Seawater	AANIIHTFFDFKGKPYWWIFTDKQLNTDTMIRLAYGHYLLAFFMAYLGLIHGIDMHYD*
Ga0129337_11220263	3300012968	Aqueous	LGLVLCCTHLSEITLTIAANIFHTFFLFYGKFYWWIFTDKQLNSDTMVRLAYAHYLAAFFLTYLSLLHGIDMHYD*
Ga0129338_13733601	3300012970	Aqueous	FLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFLFYGKFYWWIFTDKQLNSDTMVRLAYAHYLAAFFLTYLSLLHGIDMHYD*
Ga0170791_130195842	3300013295	Freshwater	VVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMVRLAYAHYLSAFFLTYLSLLHGVDMHYD*
Ga0182047_11046571	3300016737	Salt Marsh	VVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETA
Ga0181553_103562021	3300018416	Salt Marsh	VVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAM
Ga0188884_10118871	3300018610	Freshwater Lake	VFSFLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYG
Ga0188880_10000278	3300018640	Freshwater Lake	MVFQVVVFAGLVLCCTHLSEITLTIAANIMHTFFMFFGKFYWWVFTDKQLNTDTIIRLAYAHYVAAFYLFYISLIHGVDLHYD
Ga0193200_11300282	3300018840	Marine	MIQLVIFTGLVLCATHLSEITLTIVANIIHSLFLFKAKPYWWFFTDKFLNTDTMLRLAYAHYVLAFFLLFLGLVHGVDMHYD
Ga0193017_101815181	3300018983	Marine	LCCTHLSDITLTIAANILHTFFLFKGKAYXWIFTDKTINTDTMIRLTYGHYVVAFYLGYLGLIHGVDMHYDXKNEATLRA
Ga0180034_11821381	3300019207	Estuarine	VVHSPLMIQVVVFMGLVLCCTHLSEITLTIAANALHTFFGFKGAPYWWFFTDRLLNTDTIIRLAYGHYVLAFYLAFLGIVHGVDMHYD
Ga0180114_11051972	3300019232	Groundwater Sediment	VFTFLVFQGVTFFGLILCCTHLSEITLTIAANIFHTFFLFYGKAYXXIFTDKTLNTDTVIRLAYAHYLSAFYMFYLALLHGLDLHYDXKNEVFYDGL
Ga0182044_13194802	3300020014	Salt Marsh	VVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGY
Ga0206356_101214922	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MILQVVTFLGLVLCCTHLSEITLTIAANIMHTFFLFHGKVYWWIFTDKNLNTDTLVRLAYAHYLSAFYM
Ga0206352_109306102	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MIIQIVTFLGLVLCSTHLSDITLKIAANTMHQIFNLKTKVYWWLFTDKNLNTDTIIRLAYAHYIAAFILFGLVIMHAVDMHYD
Ga0214202_10015625	3300020728	Freshwater	LVFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWVFTDKQLNSDTMIRLAYAHYVSAFFLTYLSLIHGVDMHYD
Ga0206690_109023762	3300021355	Seawater	MFSFLIFMVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKVYWWVFTDKQLNSDTLVRLAYAHYLSAFFLAYLGLMHGIDMHYDWKNENTFDGLEASMV
Ga0213853_112200131	3300021861	Watersheds	VLCCTHLSEITLTIAANVLHTFFDFKGKAYWWFFTDKQLNTDTMVRLAYAHYLSA
Ga0210312_1194682	3300022367	Estuarine	MFSFLIFQVVVFLGLVLCCTHLSEITLTIAANVMHTAFGFYGKPYWWLFTDKQLNTD
Ga0255773_102641102	3300022925	Salt Marsh	VVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIH
Ga0256330_11351992	3300024481	Freshwater	LFFFGLVLCCTHLSEITLTIAANILHTFFMFKGKFYXXIFTDKQLNSDTVVRLAYVHYLSAFYMAYLGLIHGVDMHYDXKNETSYDGLDAEMAXXDEALSNE
Ga0255224_11230211	3300024483	Freshwater	MVFQVVVFAGLVLCCTHLSEITLTIAANIMHTFFMFFGKFYXXIFTDKQLNTDTIIRLAYAHYVAA
Ga0209199_10074213	3300025809	Pelagic Marine	VFSFLIFQAAVFLGLALCCTHLSEITLTIAANIMHTFFFFYGKLYWWLFTDKQFCSDTLIRLAYGHYVVAFCLGYASFIHTIDIHYDWKNKTAMDGMAANLT
Ga0209534_104818672	3300025880	Pelagic Marine	VFSFLIFQVVVFFGLALCCTHLSEITLTIAANIMHTFFFFYGKFYWWLFTDKQLCSDTLIRLAYGHYVIAFYLGYASFIHTIDMHYDWKNETAMDGMAANLT
Ga0255255_10314512	3300028085	Freshwater	VFCGLVLCCTHLSEITLTIAANILHTFFFFYGKFYXXVFTDKSLNSDTIVRLAYAHYLSAFYLFYIALLHGIDIHYDXKNETSYDGLEAEMIXFD
Ga0255299_10937002	3300028089	Freshwater	LGLVLCCTHLSEITLTIAANIFHTFFLFYGKFYWWIFTDKQLNSDTMVRLAYAHYLAAFF
Ga0256335_11733641	3300028112	Freshwater	MNMKQLEKVVFLVFLIFQVVVFLGLVLCCTHLSEITLTIAANIFHTFFMFYGKFYWWIFTDKQLNSDTMVRLAYAHYLSAFF
Ga0256316_10933451	3300028261	Freshwater	MFTHLSEITLTIAANIMHTFFMFFGKFYXXIFTDKQLNTDTIIRLA
Ga0210271_100555962	3300030545	Soil	FGLALCCTHLSEITLTIAANILHTVFCFKGKAYWXIFTDKQLNTDTLVRLAYAHYLSAFFFIWHI
Ga0308189_100407722	3300031058	Soil	VVTFCGLILCCTHLSEITLTIAANILHTFFFFKGKVYWWLFTDKTLNSDTLIRLAYAHYLSAFYMFYLAILHGLDLHYDWKNEITYDGLEAEMVW
Ga0315837_10359882	3300031136	Plant Litter	MILQVVTFFGLVLCCTHLSEITLTIAANVVHTVFLFHGKFYWWIFTDKNLNTDTLIRLAYAHYLSAFYMAYLGLLHGIDM
Ga0315304_11049721	3300032145	Marine	VFTFLIFQVVVFLGLVLCCTHLSEITLTIAANILHTFFDFKGKAYWWLFTDKQLSTDTMVRLAYAHYLAAFFMAYLGLIHGVDMHYD
Ga0214503_12474722	3300032466	Switchgrass Phyllosphere	MILQVVTFFGLVLCCTHLSEITLTIAANVVHTVFLFHGKFYWWIFTDKNLNTDTLIRLAYAHYLS
Ga0314749_11189182	3300032915	Switchgrass Phyllosphere	MILQVVTFFGLVLCCTHLSEITLTIAANVVHTVFLFHGKFYWWIFTDKNLNTDTLIRLAYAHYLSAFYM
Ga0335004_0263359_65_292	3300034021	Freshwater	LGLVLCCTHLSEITLTIAANIFHTFFLFYGKFYWWIFTDKQLNSDTMVRLAYAHYLAAFFLTYLSLLHGIDMHYD
Ga0335033_0204533_860_1063	3300034117	Freshwater	MCCTHLSEITLTIAANILHTFFAFKGKFYWWFFTDKQLNTDTTIRLAYAHYVSAFFLAYLGLIHGID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences