Metagenome / Metatranscriptome Family F068857

Basic Information
Family ID	F068857
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	45 residues
Representative Sequence	LRVLSLEDGNGLLAANIPGGVKNAAEDGSWRPNGLEEEFRISAKR
Number of Associated Samples	103
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.68 %
% of genes near scaffold ends (potentially truncated)	20.97 %
% of genes from short scaffolds (< 2000 bps)	96.77 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Most Common Taxonomy
Group	Unclassified (88.710 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.032 % of family members)
Environment Ontology (ENVO)	Unclassified (33.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.742 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01063	Aminotran_4	1.63
PF14870	PSII_BNR	0.81
PF00117	GATase	0.81
PF13429	TPR_15	0.81
PF00477	LEA_5	0.81
PF07589	PEP-CTERM	0.81
PF01323	DSBA	0.81
PF00265	TK	0.81
PF13520	AA_permease_2	0.81
PF00144	Beta-lactamase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	3.25
COG1435	Thymidine kinase	Nucleotide transport and metabolism [F]	0.81
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
All Organisms	root	All Organisms	11.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
cellular organisms	root	All Organisms → cellular organisms	10.48 %
Viruses	superkingdom	All Organisms → Viruses	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.48 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.61 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples	0.81 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.81 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.61 %
Methylococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis	0.81 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.81 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.81 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.81 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.61 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Candidatus Methylumidiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus	0.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.81 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.81 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.61 %
Candidatus Methylumidiphilus alinenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	0.81 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.81 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.81 %
Riboviria	clade	All Organisms → Viruses → Riboviria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002645\|Ga0005452J37222_11421	Not Available	588	Open in IMG/M
3300002645\|Ga0005452J37222_11464	Not Available	588	Open in IMG/M
3300002650\|Ga0005470J37258_102404	Not Available	558	Open in IMG/M
3300002653\|Ga0005486J37273_105950	Not Available	560	Open in IMG/M
3300002658\|Ga0005478J37266_102852	Not Available	574	Open in IMG/M
3300002660\|Ga0005454J37223_100186	Not Available	609	Open in IMG/M
3300002663\|Ga0005462J37253_100815	Not Available	568	Open in IMG/M
3300002869\|Ga0006819J43187_101902	Not Available	590	Open in IMG/M
3300003286\|Ga0006877J48918_11471	Not Available	587	Open in IMG/M
3300004092\|Ga0062389_100489631	Not Available	1374	Open in IMG/M
3300004118\|Ga0058886_1376242	Not Available	552	Open in IMG/M
3300004133\|Ga0058892_1014794	Not Available	502	Open in IMG/M
3300004135\|Ga0058884_1021459	Not Available	562	Open in IMG/M
3300004139\|Ga0058897_10062475	Not Available	585	Open in IMG/M
3300004140\|Ga0058894_1001936	Not Available	586	Open in IMG/M
3300004295\|Ga0068932_1335926	Not Available	560	Open in IMG/M
3300004475\|Ga0068969_1050034	Not Available	565	Open in IMG/M
3300004631\|Ga0058899_12228633	Not Available	574	Open in IMG/M
3300004635\|Ga0062388_101909041	Not Available	612	Open in IMG/M
3300005363\|Ga0008090_10244355	Not Available	586	Open in IMG/M
3300006426\|Ga0075037_1955930	Not Available	501	Open in IMG/M
3300006934\|Ga0080680_1247077	Not Available	570	Open in IMG/M
3300007219\|Ga0075025_1000918	Not Available	590	Open in IMG/M
3300007219\|Ga0075025_1049163	Not Available	563	Open in IMG/M
3300007327\|Ga0075016_1074087	Not Available	554	Open in IMG/M
3300007327\|Ga0075016_1448206	Not Available	517	Open in IMG/M
3300007526\|Ga0075022_1022866	Not Available	578	Open in IMG/M
3300007526\|Ga0075022_1069333	Not Available	591	Open in IMG/M
3300008785\|Ga0103638_1000414	Not Available	889	Open in IMG/M
3300010097\|Ga0127501_1020887	Not Available	547	Open in IMG/M
3300010358\|Ga0126370_11682922	Not Available	610	Open in IMG/M
3300010854\|Ga0126360_1128723	Not Available	588	Open in IMG/M
3300010855\|Ga0126355_1163209	Not Available	583	Open in IMG/M
3300010858\|Ga0126345_1044258	Not Available	592	Open in IMG/M
3300010859\|Ga0126352_1235105	Not Available	600	Open in IMG/M
3300011021\|Ga0138529_123333	Not Available	579	Open in IMG/M
3300011025\|Ga0138561_101869	Not Available	593	Open in IMG/M
3300011051\|Ga0138540_162098	Not Available	590	Open in IMG/M
3300011060\|Ga0138583_1082177	Not Available	546	Open in IMG/M
3300011090\|Ga0138579_1195256	Not Available	586	Open in IMG/M
3300011120\|Ga0150983_10094004	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300011120\|Ga0150983_16710791	Not Available	596	Open in IMG/M
3300014169\|Ga0181531_10072078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2038	Open in IMG/M
3300017942\|Ga0187808_10489312	Not Available	569	Open in IMG/M
3300017961\|Ga0187778_10995839	Not Available	580	Open in IMG/M
3300018038\|Ga0187855_10051129	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300019155\|Ga0184568_116492	Not Available	563	Open in IMG/M
3300019163\|Ga0184581_127550	Not Available	594	Open in IMG/M
3300019183\|Ga0184601_112623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300019189\|Ga0184585_138428	Not Available	607	Open in IMG/M
3300019211\|Ga0187799_1074447	Not Available	578	Open in IMG/M
3300019241\|Ga0187793_1358176	Not Available	577	Open in IMG/M
3300019244\|Ga0180111_1286211	Not Available	546	Open in IMG/M
3300019258\|Ga0181504_1172246	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300019264\|Ga0187796_1012054	Not Available	635	Open in IMG/M
3300019265\|Ga0187792_1123772	Not Available	552	Open in IMG/M
3300021855\|Ga0213854_1105248	Not Available	502	Open in IMG/M
3300021855\|Ga0213854_1208371	Not Available	588	Open in IMG/M
3300021857\|Ga0213849_1243960	Not Available	572	Open in IMG/M
3300021858\|Ga0213852_1284823	Not Available	577	Open in IMG/M
3300021860\|Ga0213851_1743969	Not Available	591	Open in IMG/M
3300021861\|Ga0213853_10978539	Not Available	549	Open in IMG/M
3300021929\|Ga0213845_1013811	Not Available	587	Open in IMG/M
3300022498\|Ga0242644_1039245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300022500\|Ga0242643_117322	Not Available	568	Open in IMG/M
3300022502\|Ga0242646_1011250	Not Available	754	Open in IMG/M
3300022503\|Ga0242650_1004154	Not Available	918	Open in IMG/M
3300022503\|Ga0242650_1016599	Not Available	587	Open in IMG/M
3300022504\|Ga0242642_1068032	Not Available	581	Open in IMG/M
3300022504\|Ga0242642_1093197	Not Available	520	Open in IMG/M
3300022505\|Ga0242647_1027018	Not Available	602	Open in IMG/M
3300022507\|Ga0222729_1071320	Not Available	513	Open in IMG/M
3300022508\|Ga0222728_1067707	Not Available	629	Open in IMG/M
3300022508\|Ga0222728_1084956	Not Available	580	Open in IMG/M
3300022508\|Ga0222728_1111428	Not Available	528	Open in IMG/M
3300022508\|Ga0222728_1123238	Not Available	510	Open in IMG/M
3300022523\|Ga0242663_1058114	Not Available	697	Open in IMG/M
3300022523\|Ga0242663_1104851	Not Available	568	Open in IMG/M
3300022525\|Ga0242656_1114905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	540	Open in IMG/M
3300022525\|Ga0242656_1122104	Not Available	529	Open in IMG/M
3300022528\|Ga0242669_1022312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	931	Open in IMG/M
3300022528\|Ga0242669_1088284	Not Available	585	Open in IMG/M
3300022529\|Ga0242668_1000221	All Organisms → Viruses → Riboviria	4453	Open in IMG/M
3300022529\|Ga0242668_1124625	Not Available	546	Open in IMG/M
3300022530\|Ga0242658_1103526	Not Available	685	Open in IMG/M
3300022531\|Ga0242660_1003649	Not Available	2238	Open in IMG/M
3300022531\|Ga0242660_1094182	Not Available	724	Open in IMG/M
3300022532\|Ga0242655_10139572	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300022533\|Ga0242662_10234132	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300022711\|Ga0242674_1056937	Not Available	549	Open in IMG/M
3300022715\|Ga0242678_1048711	Not Available	607	Open in IMG/M
3300022716\|Ga0242673_1028562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	842	Open in IMG/M
3300022717\|Ga0242661_1052565	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300022717\|Ga0242661_1122325	Not Available	563	Open in IMG/M
3300022724\|Ga0242665_10302194	Not Available	560	Open in IMG/M
3300023560\|Ga0247514_118715	Not Available	593	Open in IMG/M
3300023562\|Ga0247516_118893	Not Available	585	Open in IMG/M
3300028445\|Ga0189899_106692	Not Available	581	Open in IMG/M
3300028445\|Ga0189899_107317	Not Available	565	Open in IMG/M
3300029636\|Ga0222749_10601172	Not Available	601	Open in IMG/M
3300029951\|Ga0311371_11176083	Not Available	889	Open in IMG/M
3300030549\|Ga0210257_10579958	Not Available	681	Open in IMG/M
3300030577\|Ga0210260_10266410	Not Available	594	Open in IMG/M
3300030730\|Ga0307482_1209146	Not Available	596	Open in IMG/M
3300030738\|Ga0265462_12135172	Not Available	549	Open in IMG/M
3300030759\|Ga0265745_1019585	Not Available	582	Open in IMG/M
3300030760\|Ga0265762_1125728	Not Available	590	Open in IMG/M
3300030824\|Ga0265726_101259	Not Available	876	Open in IMG/M
3300030882\|Ga0265764_110233	Not Available	589	Open in IMG/M
3300030913\|Ga0265759_111973	Not Available	503	Open in IMG/M
3300030942\|Ga0247549_103485	Not Available	586	Open in IMG/M
3300031040\|Ga0265754_1022639	Not Available	596	Open in IMG/M
3300031041\|Ga0265755_114663	Not Available	519	Open in IMG/M
3300031042\|Ga0265749_103810	Not Available	558	Open in IMG/M
3300031043\|Ga0265779_112976	Not Available	532	Open in IMG/M
3300031043\|Ga0265779_112976	Not Available	532	Open in IMG/M
3300031663\|Ga0307484_111920	Not Available	594	Open in IMG/M
3300031663\|Ga0307484_112613	Not Available	585	Open in IMG/M
3300031663\|Ga0307484_112747	Not Available	584	Open in IMG/M
3300032072\|Ga0326631_119143	Not Available	505	Open in IMG/M
3300032515\|Ga0348332_11571033	Not Available	770	Open in IMG/M
3300032783\|Ga0335079_10535134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300032828\|Ga0335080_11064611	Not Available	820	Open in IMG/M
3300034479\|Ga0314785_016262	Not Available	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.87%
Aquatic	Environmental → Aquatic	16.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.26%
Freshwater	Environmental → Aquatic → Freshwater	16.13%
Peat	Environmental → Terrestrial → Peat	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.90%
Loam	Environmental → Terrestrial → Soil → Loam	12.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.03%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.10%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	10.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	3.23%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.23%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.61%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002645	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF101 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002650	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF119 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002653	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF135 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002658	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF127 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002660	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF103 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002663	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF111 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002869	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 20 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003286	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 78 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004133	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006934	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007219	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007327	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaT_ABR_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008785	Microbial communities from wetland soil in Czech Republic - R1_cDNA	Environmental	Open in IMG/M
3300010097	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010855	Boreal forest soil eukaryotic communities from Alaska, USA - W1-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011021	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 7 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011025	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 46 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011051	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300019155	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019163	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019183	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019244	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021857	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021929	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - DR:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023560	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023562	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028445	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 61 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030549	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030577	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO131-ARE010SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030824	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030882	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030942	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031041	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031042	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005452J37222_114211	3300002645	Forest Soil	LRVLSLGDGNGLSTVNIPGSVTNAVEDGSWRPNGLEEEFRISAKR*
Ga0005452J37222_114641	3300002645	Forest Soil	LEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEKLRISVKR*
Ga0005470J37258_1024042	3300002650	Forest Soil	LRVLRSEDGNGLSAMNTPGGVKNAVEDGSWRPNGLEEEFRIPAKR*
Ga0005486J37273_1059501	3300002653	Forest Soil	LRVLRSEDGNGLSAMNTPGGVKNAVEDGSWRPNGLEQEFRIPAKR*
Ga0005478J37266_1028521	3300002658	Forest Soil	LRVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISTKR*
Ga0005454J37223_1001861	3300002660	Forest Soil	LRVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISAKR*
Ga0005462J37253_1008151	3300002663	Forest Soil	LEGRLRVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISAKR*
Ga0006819J43187_1019021	3300002869	Peatlands Soil	LRVLSLDDGNGLSAMNTPGGVKNAAEDGSGRPNGLEEEFRISAKR*
Ga0006877J48918_114711	3300003286	Peatlands Soil	LRILSLEDGNGLSTVNIPGGVRNAPEDGSWRPNGLVEEFRISAKR*
Ga0062389_1004896312	3300004092	Bog Forest Soil	LRVLSLEDGNGLLAVNIPGGVKNAGEDGSRGPNGLAEEFRISTKG*
Ga0058886_13762421	3300004118	Forest Soil	LRILSLEDGNGLSTVNIPGGVTNASEDGSWRPNGLAEEFRISAKR*
Ga0058892_10147941	3300004133	Forest Soil	LRVLGLEDGNGLSAMNIPGGVKNAVEDGSWRPNGLEEEFRISAKG*
Ga0058884_10214591	3300004135	Forest Soil	LRVLGLEDGNGLWTLKAPGDVKNAAEGGSSGPNGLEEEFRISSKR*
Ga0058897_100624751	3300004139	Forest Soil	LDGRLRVLSSRDGNGLGVTNIPSGVINVIEGGSARPNGLEEEFRISPKG*
Ga0058894_10019361	3300004140	Forest Soil	LEDGNGLWTLKAPGDVKNAAEGGSSRPNGLAEEFRISSKG*
Ga0068932_13359261	3300004295	Peatlands Soil	LRVLSLRAGNGLGTLNIPGGVKNAVEDGSAKPNELEEEFRISPKG*
Ga0068969_10500341	3300004475	Peatlands Soil	LRVLGLDDGNGLLAMNIPEGVMNAVEDGSWEPNGLMDKFRIATKR*
Ga0058899_122286331	3300004631	Forest Soil	LRVLSSEDGNGLSAMNTPGGVKNAAEDGSWRPNGLEEECRIPAKR*
Ga0062388_1019090411	3300004635	Bog Forest Soil	LSLEDGNGLLAVNIPGGVKNAGEDGSRGPNGLAEEFRISTKG*
Ga0008090_102443552	3300005363	Tropical Rainforest Soil	LDGRLGVLSFEDGNGLRHRKYPGGVKSATEDGSQKPNGLEEEFRIGPKR*
Ga0075037_19559301	3300006426	Permafrost Soil	LRVLSLEDGNGLSAANIPGGVKNAIEDGSWRPNGLEEKFRISVKR*
Ga0080680_12470771	3300006934	Tropical Rainforest Soil	LDGHLRVLGLRAGNGLWAWNILGGVKNAAEDGSSEPNELAEKFRISAKR*
Ga0075025_10009181	3300007219	Watersheds	LEGRLRVLSLEDGNGLWTLKAPGDVKNAAEGGSSRPNGLAEEFKISSKG*
Ga0075025_10491631	3300007219	Watersheds	LDGRLRVLSSRDGNGLWATNIPEGVMSAGEGGSARPNGLEEEFGISPKG*
Ga0075016_10740871	3300007327	Watersheds	LDGHLRVLGFRAGNGLWAWNIPGGVKNAAEDGSSKPNELAEKFRISAKR*
Ga0075016_14482061	3300007327	Watersheds	LEGRLRVLSLEDGNGLWTLKAPGDVKNAAEGGSSRPNGLAEEFRISPKG*
Ga0075022_10228661	3300007526	Watersheds	LDGYLIVLSSRDGNGLCVTNIPGGVTNVAEGGSARPNGLEEEFRISAKG*
Ga0075022_10693331	3300007526	Watersheds	LRAGNGLGALNIPGSVKNAAKDGSSKSNELAEEFRISAKR*
Ga0103638_10004142	3300008785	Wetland Soil	LGFKDGNGLWAMKAPGGVKNAVEGGSSRPNGLEEKSRIALKR*
Ga0127501_10208871	3300010097	Grasslands Soil	LDGRLGVLSLEDGNGLRHRTYPGGVKSATEDGSQKLNGLEEKFRIGPKR*
Ga0126370_116829222	3300010358	Tropical Forest Soil	LDGRLRVLGSRAGNGLCVTNTPGGVTNAAEGGSARPNGPEEGFGISPKE*
Ga0126360_11287231	3300010854	Boreal Forest Soil	LRILSLEDGNGLSTVNTPGGVTNASEDGSWRPNGLAEEFRISAKR*
Ga0126355_11632091	3300010855	Boreal Forest Soil	LDGHLRVLGLRAGNGLWAWNIPGGVTNAVEDASLKPNELAEKFRISAKR*
Ga0126345_10442581	3300010858	Boreal Forest Soil	LEGRLRVLSLEDGNGLWTLKAPGDVKNAAEGGSSRPNGLAEEFRISSKG*
Ga0126352_12351051	3300010859	Boreal Forest Soil	LRVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEKFRISVKR*
Ga0138529_1233331	3300011021	Peatlands Soil	LRVLSSEDGNGLSAMNIPGGVKNAAEDGSWRPNGLEKECRIPAKR*
Ga0138561_1018691	3300011025	Peatlands Soil	LRVLSLDDGNGLSAMNTPGGVQNAAEDGSGRPNGLEEEFRISAKR*
Ga0138540_1620981	3300011051	Peatlands Soil	LRILSLEDGNGLSTVNISGGVRNAPEDGSWRPNGLVEEFRISAKR*
Ga0138583_10821771	3300011060	Peatlands Soil	LRVLSSEDGNGLSAMNIPGGVKNAAEDGIWRPNGLEKECRIPAKR*
Ga0138579_11952561	3300011090	Peatlands Soil	LRVLSSEDGNGLSAMHIPGGVKNAAEDGSWRPNGLEKECRIPAKR*
Ga0150983_100940043	3300011120	Forest Soil	ERKLDGRLRVLSSRDGNGLCAANIPGGVINIIEGGSVRPNGMEEEFRISVKE*
Ga0150983_167107911	3300011120	Forest Soil	LRVLSLEDGNGLSAANIPGGVKNAIEDGSWRPNVLEEEFRISAKR*
Ga0181531_100720783	3300014169	Bog	LRVLSLEDGNGLLAANIPGGVKNAAEDGSWRPNGLEEEFRISAKR*
Ga0187808_104893121	3300017942	Freshwater Sediment	GSEDGNGLWAVKAPGGVKNAAEGGSTRPNGLEEEFRISPKR
Ga0187778_109958391	3300017961	Tropical Peatland	LRVLGLEDGNGLWTRKAPGGVKNVAEGGSSRPNGLEEEFRISPKR
Ga0187855_100511293	3300018038	Peatland	LRVLGLEDGNGLLAANTPGGVKNAVEDGSWRPNGLEEEFRISAKR
Ga0184568_1164921	3300019155	Soil	LRVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISTKR
Ga0184581_1275501	3300019163	Soil	LRVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISAKR
Ga0184601_1126232	3300019183	Soil	LRVLSLEDGNGLSANTPGGVKNAIEDGSWRPNGLEEEFRISTKR
Ga0184585_1384281	3300019189	Soil	SRDGNGLCATNIPGGVTNTAEGGSRRPNGLEEEFRISPKG
Ga0187799_10744471	3300019211	Peatland	LVGSLRVLSSENGNGPRQRTYPAGVKNAGEDGSQRPNGLEEEFRISLKE
Ga0187793_13581761	3300019241	Peatland	LRVLGLDDGNGLLAVNIPEGVMSAIEDGSWGPNGLMDKFRISAKR
Ga0180111_12862111	3300019244	Groundwater Sediment	LDGRLRVLDSRDGNGLCALNIPGGVMSEAEDGSEGPNGLSEEFRTSPKR
Ga0181504_11722461	3300019258	Peatland	LRVLSLGDGNGLLAANTPGGVKNAVEDGSWRPNGLEEEFRI
Ga0187796_10120541	3300019264	Peatland	LDGHLRVLGLRASNGLWAENIPGGVKNAAEDGSSKPNELEDRLRISAKR
Ga0187792_11237721	3300019265	Peatland	LEAGNGLWAKKAPGGVRNVVEGGSARPNGLAEEFGI
Ga0213854_11052481	3300021855	Watersheds	LDGRLRVLSSRDGNGLCATNIPGGVINVNEGGSARPNELEEEFRISPKE
Ga0213854_12083711	3300021855	Watersheds	LRILSLEDGNGLSTVNIPGGVTNASEDGSWRPNGLAEEFRISAKR
Ga0213849_12439601	3300021857	Watersheds	LEGRLRVLGLEDGNGLWALKAPGDVKNAAEGGSSRPNGLDEKSRIPPKG
Ga0213852_12848231	3300021858	Watersheds	LRVLRSEDGNGLSAMNTPGGVKNAVEDGSWRPNGLEEEFRIPAKR
Ga0213851_17439691	3300021860	Watersheds	LRVLSSEDGNGLSAMNTPGGVKNAAEDGSWRPNGLEEECRIPAKR
Ga0213853_109785391	3300021861	Watersheds	LEGRLRVLSLEDGNGLWTLKAPGDVKNAAEGGSSRPNGLAEEFRISSKG
Ga0213845_10138111	3300021929	Watersheds	LEGRLRVLSLEDGNGLWTLKAPGDVKNAVEGGSSRPNGLAEEFRISPKG
Ga0242644_10392453	3300022498	Soil	LDGCLRVLSSRDGNGLCATNIPGGVTNAAEGGSRKPNGLE
Ga0242643_1173221	3300022500	Soil	LDGRLRILGSRDGNGLCATNIPGGVTNAAEGGSRNPNGLEEEVRISPKE
Ga0242646_10112501	3300022502	Soil	LRVLGLEDGNGLSAMNIPGGVKNAVEDGSWRPNGLEEEFRISAKG
Ga0242650_10041541	3300022503	Soil	LRVLRSEDGNGLSAMNTPGGVKNAVEDGSWRPNGLEQEFRIPAKR
Ga0242650_10165991	3300022503	Soil	LDGHLRVLGLRAGNGLWAWNIPGGVKNAAEDGSSEPNELAEKFRTSAKR
Ga0242642_10680321	3300022504	Soil	LDGHLRVLGLRAGNGLWAWNIPGGVTNAVEDASSKPNELAEKFRISAKR
Ga0242642_10931972	3300022504	Soil	LRAGNGLWAWNIPGGVKNAAEDGSLKPNELAEEFRISPKG
Ga0242647_10270181	3300022505	Soil	LRVLSLEDGNGLSAANIPGGVKNAIEDGSWRPNGLEEKLRISVKR
Ga0222729_10713201	3300022507	Soil	LDGHLRVLGLRAGNGLWASNIPGSVKNAAEDGSSEPNELAEEFRILAKR
Ga0222728_10677071	3300022508	Soil	LDGRLEVVTARDGNGLSATNIPGGVMNVIEGGSARPNEPEEEFRI
Ga0222728_10849561	3300022508	Soil	LDGHLRVLGLRAGNGLWAWNIPGGVTNAAEDASSKPNELAEKFRISAKR
Ga0222728_11114281	3300022508	Soil	LRILGSRDGNGLCATNIPGGVINVIEGGSARPNGLEEEFRISPKG
Ga0222728_11232381	3300022508	Soil	LDGRLRVLSSRDGNGLCATNIPGGVTNAAEGGSRMPN
Ga0242663_10581142	3300022523	Soil	MVFIVLSSRDGNGLCATNIPGGVTNAAEGGSRKPNGLEEEFRIS
Ga0242663_11048511	3300022523	Soil	VLSSRDGNGLCATNIPGGVTNAAEGGSRKPNGLEEEFRISPASAIHRW
Ga0242656_11149051	3300022525	Soil	DDNGLCATNIPGGVINVIEGGSARPNGPEEEFRISSKG
Ga0242656_11221041	3300022525	Soil	LSSRDGNGLCATNIPGGVTNAAEGGSRRPNGLEEEFRISPKG
Ga0242669_10223121	3300022528	Soil	GPCATKIPGGVTNAIQGGSRRSNGLDEEFRISTKG
Ga0242669_10882841	3300022528	Soil	LKVLSSCGGNGLCATNVPGGVINVIEGGSVRPNGLEEEFRISAKE
Ga0242668_10002214	3300022529	Soil	LRVLSSRDGNGLSATNLPGGVTNATEGRSRRPNGLEEEFRISPKG
Ga0242668_11246251	3300022529	Soil	LEGSLRVLGLENGNGLWTLKAPGDVKNAAEGGSPRPNGLEEKFRTSLKG
Ga0242658_11035261	3300022530	Soil	LSSRDGNGPCATNIPGGVMNAIEGGSRRPNGLEEEFRILPKG
Ga0242660_10036491	3300022531	Soil	LSLEDGNGLKRGTYPGGVRNANEDGSGRPNGREEEFRITAKR
Ga0242660_10941821	3300022531	Soil	LSANEIASNIPGGVINVTEGGSVRPNGLEEEFRISSKG
Ga0242655_101395722	3300022532	Soil	LSVLSSRDGNGLCATNIPGGVTNAAEGGSRKPNGLEEEFRIS
Ga0242662_102341322	3300022533	Soil	LDGRFRILGSRDGNGVCGMNIPGGVTNAAEGGGARPNGAEEESRNSPKEGAGGFDP
Ga0242674_10569371	3300022711	Soil	LRGLRSEDGNGLSAMNTPGGVKNAVEDGSWRPNGLEEEFRIPAKG
Ga0242678_10487111	3300022715	Soil	LRVLSLGDGNGLSTVNIPGSVTNAVEDGSWRPNGLEEEFRISAKR
Ga0242673_10285621	3300022716	Soil	RKLDGCLRVLSSRDGNGPCATNIPGEAMNAIEGGSRRPNGLEEEFRISPGKLGLYVN
Ga0242661_10525651	3300022717	Soil	DGNGLCATNIPGGVTNAAEGGSRKPNGLEEEFRISPKG
Ga0242661_11223252	3300022717	Soil	MDGLLRILSSRDGNGLRATNIPGGVTNAAEGGSARPNGLGEEVRISPKE
Ga0242665_103021941	3300022724	Soil	LDGRLRILSSRDGNGLGATNIPSGVINVIEGGSARPNGLEEEFRISSKG
Ga0247514_1187151	3300023560	Soil	LRVLSLEDGNGLSAANTPGGVKNTIEDGSWRPNGLEEEFRISTKR
Ga0247516_1188931	3300023562	Soil	LRVLSSEDGNGLSAAKTHGGVKNAIEDGSWRPNGLEEEFRISTKR
Ga0189899_1066921	3300028445	Peatlands Soil	LRVLSLDDGNGLSAMNTPGGVKNAAEDGSGRPNGLEEEFRISAKR
Ga0189899_1073171	3300028445	Peatlands Soil	LRILSLEDGNGLSTVNIPGGVRNAPEDGSWRPNGLVEEFRISAKR
Ga0222749_106011721	3300029636	Soil	LGFKDGNGLWAMKAPGGVKNAVEGGSSRPNGLEEKSRIALKR
Ga0311371_111760831	3300029951	Palsa	LRVLSLGDGNGLLAANTPGGVKNAVEDGSWRPNGLEEEFRISAKR
Ga0210257_105799581	3300030549	Soil	LEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISAKR
Ga0210260_102664101	3300030577	Soil	LEDGNGLSAANIPGGVKNAIEDGSWRPNGLEEEFRISAKR
Ga0307482_12091462	3300030730	Hardwood Forest Soil	LRVLRSEDGNGLSAMNTPGGVKNAAEDGSWRPNGLEQEFRIPAKR
Ga0265462_121351721	3300030738	Soil	LRVLGSEDGNGLSAMNIPGGVKNAVEDGSWRPNGLEEEFRISAKR
Ga0265745_10195851	3300030759	Soil	LRVLSLEDGNGLSAANIPGGVKNAIEDGSRRPNGLEEKFRISVKR
Ga0265762_11257281	3300030760	Soil	LRVLSLEDGNGLSAANIPGGVKNAIEDGSWRPNGLEEKFRISVKR
Ga0265726_1012591	3300030824	Soil	LDGHLRVLGLRAGNGLWAWNIPGGVTNAVEDASLKPNELAEKFRISAKR
Ga0265764_1102331	3300030882	Soil	LRVLGLDDGNGLLAMNIPEGVMNAVEDGSWEPNGLMDKFRIATKR
Ga0265759_1119731	3300030913	Soil	LDGRLRILSLRDGNGLCTMNIPGGVMNAAEGGSARPNELEEEFRISSKG
Ga0247549_1034851	3300030942	Soil	VLSSRDGNGLSATNIPGGVTNAIEGRSRGPNGLEEEFRISSKG
Ga0265754_10226391	3300031040	Soil	LRVLRSEDGNGLSAMNTPGGVKNAVEDASWRPNGLEEEFRIPAKR
Ga0265755_1146631	3300031041	Soil	LDGPLRVLGLRAGNGLWAWNIPGGVTNAVEDASLKPNELAEKFRISAKR
Ga0265749_1038101	3300031042	Soil	LDFKDGNGLWAMKAPGGVKNAVEGGSSRPNGLEEKSRIALKR
Ga0265779_1129761	3300031043	Soil	EGRLRVLSLEDGNGLSAANIPGGVKNAIEDGSRRPNGLEEKFRISVKR
Ga0265779_1129762	3300031043	Soil	LRVLSLEDGNGLSAANIPGGVKNAIEDGSRRPNGLEE
Ga0307484_1119201	3300031663	Hardwood Forest Soil	LEGSLRVLSSEDGNGPRRRTYPAGVMNAGEDGSQRPNGLEEEFGISLKG
Ga0307484_1126131	3300031663	Hardwood Forest Soil	LRAGNGLWAWNIPGGVKNAVEDGSLKPNELAEEFRISPKG
Ga0307484_1127471	3300031663	Hardwood Forest Soil	LRILSLEDGNGLSTVNIPGSVKNAVEDGSWRPNGLEEKFRISAKR
Ga0326631_1191431	3300032072	Soil	RVLSLEDGNGLSAANTPGGVKNAIEDGSWRPNGLEEEFRISTKR
Ga0348332_115710331	3300032515	Plant Litter	RVLSSRDGNGLCATNIPGGVTNAAEGGSRRPNGLEEEFRISPKG
Ga0335079_105351342	3300032783	Soil	LRVLRSEDGNGLSAMNIPGGVKNAAEDGSGRPNGLDEEFRIPAKR
Ga0335080_110646112	3300032828	Soil	LRVLRSEDGNGLSAMNIPGGVKNAAEDGSGRPNGLDEE
Ga0314785_016262_237_365	3300034479	Soil	LGFKDGNGLWVMKAPGGVKNAVEGGSSGPNGLEEKSRIALKR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068857

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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