NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074001

Metagenome / Metatranscriptome Family F074001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074001
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 86 residues
Representative Sequence MSQVPSQPAIDNARSKTDQVQRDLEVASAELGLTHGALERELPPDVKKGDVAWAIHQNKILERKVQQAAEELEEVTELLDQARGDPS
Number of Associated Samples 71
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.17 %
% of genes near scaffold ends (potentially truncated) 27.50 %
% of genes from short scaffolds (< 2000 bps) 87.50 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.833 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(27.500 % of family members)
Environment Ontology (ENVO) Unclassified
(30.833 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.167 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.00%    β-sheet: 0.00%    Coil/Unstructured: 40.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF00072Response_reg 30.00
PF01814Hemerythrin 25.83
PF13098Thioredoxin_2 2.50
PF13462Thioredoxin_4 2.50
PF12704MacB_PCD 2.50
PF01715IPPT 1.67
PF00005ABC_tran 1.67
PF02687FtsX 0.83
PF11544Spc42p 0.83
PF13514AAA_27 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG0324tRNA A37 N6-isopentenylltransferase MiaATranslation, ribosomal structure and biogenesis [J] 1.67

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.83 %
UnclassifiedrootN/A4.17 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2001200001|2001237654All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter1567Open in IMG/M
3300000156|NODE_c0516037All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1088Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_10757509All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. HM2869Open in IMG/M
3300000956|JGI10216J12902_104920587All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1803Open in IMG/M
3300000956|JGI10216J12902_107693518All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis594Open in IMG/M
3300000956|JGI10216J12902_108295146All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis828Open in IMG/M
3300001686|C688J18823_10934658All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae550Open in IMG/M
3300003321|soilH1_10269803All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1325Open in IMG/M
3300003792|Ga0055540_1006330All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis4722Open in IMG/M
3300004153|Ga0063455_101169578All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis574Open in IMG/M
3300004463|Ga0063356_101581332All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis975Open in IMG/M
3300004463|Ga0063356_102019571All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis873Open in IMG/M
3300005327|Ga0070658_10114888All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2233Open in IMG/M
3300005327|Ga0070658_10301197All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1367Open in IMG/M
3300005355|Ga0070671_101687996All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis562Open in IMG/M
3300005511|Ga0077121_10031420All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter6074Open in IMG/M
3300005515|Ga0077122_10290956All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1217Open in IMG/M
3300005515|Ga0077122_10367719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1012Open in IMG/M
3300005617|Ga0068859_100849647All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis999Open in IMG/M
3300005617|Ga0068859_102607143All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae556Open in IMG/M
3300005844|Ga0068862_100523064All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1129Open in IMG/M
3300006038|Ga0075365_10226953All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1310Open in IMG/M
3300006038|Ga0075365_10346825All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1046Open in IMG/M
3300006169|Ga0082029_1010069All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1236Open in IMG/M
3300006169|Ga0082029_1371920All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis4366Open in IMG/M
3300006169|Ga0082029_1691711All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2410Open in IMG/M
3300006178|Ga0075367_11013263Not Available530Open in IMG/M
3300006195|Ga0075366_10068359All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis2114Open in IMG/M
3300006844|Ga0075428_100959415All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae906Open in IMG/M
3300006845|Ga0075421_100920649All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis996Open in IMG/M
3300006846|Ga0075430_100439721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1076Open in IMG/M
3300006853|Ga0075420_100397157All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1192Open in IMG/M
3300007790|Ga0105679_10344685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1044Open in IMG/M
3300009553|Ga0105249_13481994All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis507Open in IMG/M
3300009840|Ga0126313_11355674All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis589Open in IMG/M
3300010036|Ga0126305_10763484All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis656Open in IMG/M
3300010397|Ga0134124_11520485All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis698Open in IMG/M
3300011332|Ga0126317_10508369All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis505Open in IMG/M
3300011426|Ga0151147_1199686All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae551Open in IMG/M
3300012212|Ga0150985_103728468All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae520Open in IMG/M
3300012212|Ga0150985_103774619All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. HM2686Open in IMG/M
3300012212|Ga0150985_106158173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis578Open in IMG/M
3300012212|Ga0150985_107075892All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis675Open in IMG/M
3300012212|Ga0150985_110063867All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis702Open in IMG/M
3300012212|Ga0150985_110987385All Organisms → cellular organisms → Bacteria → Proteobacteria979Open in IMG/M
3300012212|Ga0150985_111604835All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis536Open in IMG/M
3300012212|Ga0150985_115589382All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1351Open in IMG/M
3300012212|Ga0150985_121667285All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis685Open in IMG/M
3300012212|Ga0150985_122432214All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis705Open in IMG/M
3300012469|Ga0150984_102624013All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. HM2626Open in IMG/M
3300012469|Ga0150984_107440328All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae556Open in IMG/M
3300012469|Ga0150984_110017176All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis723Open in IMG/M
3300012469|Ga0150984_114852249All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae925Open in IMG/M
3300012469|Ga0150984_115499256Not Available802Open in IMG/M
3300012973|Ga0123351_1024833All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis3125Open in IMG/M
3300012977|Ga0134087_10071490All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium1407Open in IMG/M
3300015078|Ga0167660_1001105All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2724Open in IMG/M
3300018429|Ga0190272_12332724Not Available578Open in IMG/M
3300018465|Ga0190269_10011003All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis4060Open in IMG/M
3300018465|Ga0190269_10088785All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1492Open in IMG/M
3300018465|Ga0190269_10108151All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1374Open in IMG/M
3300018481|Ga0190271_13170366All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae551Open in IMG/M
3300019254|Ga0184641_1335867All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis731Open in IMG/M
3300020131|Ga0196972_1021388All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1006Open in IMG/M
3300025258|Ga0209129_1019583All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1276Open in IMG/M
3300025273|Ga0209673_1011421All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis3663Open in IMG/M
3300025273|Ga0209673_1011876All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter3554Open in IMG/M
3300025302|Ga0207426_1135909All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae590Open in IMG/M
3300025909|Ga0207705_10241858All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1375Open in IMG/M
3300026118|Ga0207675_101279212All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300028479|Ga0233369_1021110All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1172Open in IMG/M
3300028484|Ga0233380_1030496All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1207Open in IMG/M
3300028587|Ga0247828_10061719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1662Open in IMG/M
3300028587|Ga0247828_10126720All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1248Open in IMG/M
3300028587|Ga0247828_10170734All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1109Open in IMG/M
3300028587|Ga0247828_11086907All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis528Open in IMG/M
3300028589|Ga0247818_10576434All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter772Open in IMG/M
3300028596|Ga0247821_10347575All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300028597|Ga0247820_10409956All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis909Open in IMG/M
3300028608|Ga0247819_10224981All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter1020Open in IMG/M
3300028812|Ga0247825_10336514All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1059Open in IMG/M
3300028812|Ga0247825_10404164All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae965Open in IMG/M
3300028812|Ga0247825_10542424All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis830Open in IMG/M
3300028812|Ga0247825_10638786All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter764Open in IMG/M
3300028812|Ga0247825_10679551All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis740Open in IMG/M
3300028812|Ga0247825_11385556All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae515Open in IMG/M
3300030336|Ga0247826_11417005All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis562Open in IMG/M
3300031548|Ga0307408_100130644All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1959Open in IMG/M
3300031548|Ga0307408_102129237All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae541Open in IMG/M
(restricted) 3300031825|Ga0255338_1001929All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales34655Open in IMG/M
3300031854|Ga0310904_10712774Not Available695Open in IMG/M
3300031908|Ga0310900_10221835All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter1343Open in IMG/M
3300031911|Ga0307412_10472685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1038Open in IMG/M
3300031911|Ga0307412_10542934All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis975Open in IMG/M
3300031911|Ga0307412_10894344All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis778Open in IMG/M
3300031938|Ga0308175_100060551All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis3323Open in IMG/M
3300031938|Ga0308175_101307536All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis808Open in IMG/M
3300031938|Ga0308175_101612606All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae726Open in IMG/M
3300031938|Ga0308175_101995842All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis650Open in IMG/M
3300031939|Ga0308174_10167122All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1652Open in IMG/M
3300031939|Ga0308174_10492955All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter1001Open in IMG/M
3300031939|Ga0308174_10576729All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis929Open in IMG/M
3300032005|Ga0307411_10733352All Organisms → cellular organisms → Bacteria → Proteobacteria864Open in IMG/M
3300032074|Ga0308173_10080681All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter2474Open in IMG/M
3300032074|Ga0308173_10498310All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1090Open in IMG/M
3300032074|Ga0308173_10642413All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis965Open in IMG/M
3300032074|Ga0308173_11743459All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis587Open in IMG/M
3300032074|Ga0308173_11958476All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis553Open in IMG/M
3300032074|Ga0308173_12272492Not Available512Open in IMG/M
3300032144|Ga0315910_10456845All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis983Open in IMG/M
3300032144|Ga0315910_10680163All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis799Open in IMG/M
3300032157|Ga0315912_10274420All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1327Open in IMG/M
3300032157|Ga0315912_10584964All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae889Open in IMG/M
3300032174|Ga0307470_11881078All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae509Open in IMG/M
3300033004|Ga0335084_10271983All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis1753Open in IMG/M
3300033550|Ga0247829_10334666All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1235Open in IMG/M
3300033550|Ga0247829_10463565All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1047Open in IMG/M
3300033551|Ga0247830_10101423All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter2024Open in IMG/M
3300034268|Ga0372943_0425054All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae860Open in IMG/M
3300034384|Ga0372946_0202086All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. HM2957Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil27.50%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.50%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.00%
Arabidopsis RootHost-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root4.17%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.33%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere3.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.33%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest2.50%
Elk FecesHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Elk Feces2.50%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.50%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.67%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.67%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.83%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.83%
FecalHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.83%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.83%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2001200001Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150EnvironmentalOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003792Arabidopsis rhizosphere microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2Host-AssociatedOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005511Combined assembly of arab plate scrape MF_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005515Combined assembly of arab plate scrape MF_Cvi (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011426Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung E36 Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)Host-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012973Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung E36 Day 36 MetagenomeHost-AssociatedOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015078Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020131Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20-13CEnvironmentalOpen in IMG/M
3300025258Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025273Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025302Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028479Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung D16Host-AssociatedOpen in IMG/M
3300028484Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung F36Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031825 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
20012674052001200001SoilMSELRHPNIEQARNKTVEVQRELEVASAELGLAHGALEREVPQSVKEKSDVAWAIRQNAVLERKVQQAAEELEHVTELLEQAQGEA
NODE_051603723300000156Sugar Cane Bagasse Incubating BioreactorPSQPALEQARTKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLERKVQQAAEELEEV
ICChiseqgaiiFebDRAFT_1075750923300000363SoilMAHAKDPQLEAARSRTDQVQRDLEVASAELGLTHGALDRSVPPELRNDDVAWAIRQNAALERKVKQAAEELEEVTELLDQAQGRS*
JGI10216J12902_10492058723300000956SoilMTPLPQQNIDQAKQKTEQVQRELEVASAELGLTHGALEREIPPELKQDGDVAWAIRQSAELERKVRQAAEDLEEVTDLLEQAQAG*
JGI10216J12902_10769351823300000956SoilMSQPTQPVIEQARSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKALEKKVQQAAEELEEVTELLDKAKNDPS*
JGI10216J12902_10829514623300000956SoilMTQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKHGDVAWAIRQNKALEEKVQQAAEELEEVTELLEQAQSGQR*
C688J18823_1093465813300001686SoilMSQLPSQPALENARSKTELVQRELEVASAELGLTHGAFERELPPDVKQGDVAWAIQQNKVLERKVQHAAEELEEVT
soilH1_1026980333300003321Sugarcane Root And Bulk SoilMSQPPHPQLEEAKNRTVEVQRELEVASAELGLTHGALEREIPPAVKRKNDVAWAIRQNAELERKVQKAADDLEHVAELLDQAQGEA*
Ga0055540_100633033300003792Arabidopsis RootMRRKPSHAPLEKARTKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWAIHQNKKLEKKVQQAAEELEEVTDLLDQAKTGTPGGGGTRGDPH*
Ga0063455_10116957813300004153SoilMSQVPSQPALERAKSKTDRVQRDLEVASAELGLTHGALERELPTDVKQGDVAWALHQNKVLERKVQQAAEELEEVTDLLDQAKGARA*
Ga0063356_10158133223300004463Arabidopsis Thaliana RhizosphereMSRMPSQPQIDAARSKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWAIRQNKVLEEKVQQAADDLEEVTDMLEQAQQRQG*
Ga0063356_10201957123300004463Arabidopsis Thaliana RhizosphereMSQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKNGDVAWAIRQNKVLEEKVQQAADELEEVTELLEQAQGGQR*
Ga0070658_1011488833300005327Corn RhizosphereMTQVPSQPVLQQARSKTDQVQRDLEVASAELGLTHGALERELPPHVKKGDVAWAIHQNRVLEKKVQQAAEELEEVTELLDQARGATP*
Ga0070658_1030119733300005327Corn RhizosphereTFADVSTKGIAMSQHPQLDAARSRTDQVQRDLEVASAELGLTHGALERELPAHVKKGDVAWAIRQNAVLEKKVQQAAEELEEVAELLEQVQSRP*
Ga0070671_10168799613300005355Switchgrass RhizosphereMSKVPSTEHIDIARSKTDQVQRDLEVASAELGLTHGALERQLPPEVRNGDVAWAIRQNKVLEQKVQQAAEELEEVTELLEQVQGGPR*
Ga0077121_1003142063300005511Arabidopsis RhizosphereMTRNTSPAPLEQARSKTDQVQRDLEVASAELGLTHGALDRELPPDVKQGDVAWALHQNKKLERKVQQAAEELEEVTDLLDQAKAGGSGGDGRSRDPH*
Ga0077122_1029095623300005515Arabidopsis RootMNQLPSQPVIDQAKSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLEKKVQQAAEELEEVTELLDQAKDDPA*
Ga0077122_1036771923300005515Arabidopsis RootMSQVPSQPAIDNARSKTDQVQRDLEVASAELGLTHGALERELPPDVKKGDVAWAIHQNKILERKVQQAAEELEEVTELLDQARGDPS*
Ga0068859_10084964713300005617Switchgrass RhizosphereMSQPTHPIDQAKHKTSEVQHELEVASAELGLTHGALERELPADVKQQGDIAWAIRQNAELERKVQQAAEDLEE
Ga0068859_10260714313300005617Switchgrass RhizosphereMSQRHHPKIEKAKQKTGEVQRELEVASAELGLTNGALERKIPADVKEQGDVAWAIKQNAQLERKVQQAAEDLDEVTELLDQAKDGA*
Ga0068862_10052306423300005844Switchgrass RhizosphereMSQRHHPKIEKAKQKTGEVQRQLEVASAERGLTNGALERKIPADVKEQGDVAWAIKQNAQLERKVQQAAEDLDEVTELLDQAKDGA*
Ga0075365_1022695333300006038Populus EndosphereQPVIDQAKSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLEKKVQQAAEELEEVTELLDQAKDDSA*
Ga0075365_1034682513300006038Populus EndosphereMNQLPSQPVIDQAKSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLEKKVQQAADELEEVTELLEQAKNDPD*
Ga0082029_101006923300006169Termite NestMSREIEAAKSKTDQVQRDLEVASAELGLTHGALERELPPDVKKGDVAWAIRQNAVLERKVQQAAEELEEVTELLEQAQGRAGRAPADGRADAH*
Ga0082029_137192033300006169Termite NestMSPKIEAARSKTDHVQRELEVASAELGLTHGALERELPPEVKKGDVAWAIRQNAALERKVQQAAEDLEEVTELLEQAGGGKA*
Ga0082029_169171153300006169Termite NestMSQLPTHIEEAKSRTGQVQRELEVASAELGLTHGALDRSLPPECRSGDVAWAIAQNRILERKVQQAAEELEEVTELLEQAQGNA*
Ga0075367_1101326313300006178Populus EndosphereMTQVPSVPEPLEEARAKTDQVQRDLEVASAELGLAHGALERHLPPEQRQDDVAWAIEQNAVLERKVQQAADELEEVTELLEQAQQAAPGAPGGAP*
Ga0075366_1006835933300006195Populus EndosphereMNQLPSQPVIDQAKSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLEKKVQQAAEELEEVTELLDQAKDDSD*
Ga0075428_10095941513300006844Populus RhizosphereAMTQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERELPPEVKQGDVAWAIRQNKVLEEKVQQAADDLEEVTEMLEQAQERQG*
Ga0075421_10092064913300006845Populus RhizosphereWNERIAMSRMPSQPQIDAARSKTDQVQRDLEVASAELGLTHGALERELPPEVKQGDVAWAIRQNKVLEEKVQQAADDLEEVTEMLEQAQERQG*
Ga0075430_10043972123300006846Populus RhizosphereMSRMPSQPQIDAARSKTDQVQRDLEVASAELGLTHGALERELPPEVKQGDVAWAIRQNKVLEEKVQQAADDLEEVTEMLEQAQERQG*
Ga0075420_10039715713300006853Populus RhizosphereMSRMPSQPQIDAARSKTDQVQRDLEVASAELGLTHGALERELPPEVKQGDVAWAIRQNKVLEEKVQQAADDLEEVTEMLEQAQVRQG*
Ga0105679_1034468523300007790SoilMSTEIEAARSKTEQVQRDLEVASAELGLTHGALERELPPEAKKGDVAWAIRQNAELERKVQQAAEDLEQVAELLDQAQGRP*
Ga0105249_1348199413300009553Switchgrass RhizosphereRHHPKIEKAKQKTGEVQRELEVASAELGLTNGALERKIPADVKEQGDVAWAIKQNAQLERKVQQAAEDLDEVTELLDQAKDGA*
Ga0126313_1135567413300009840Serpentine SoilMSKVPSTEHIDIARSKTDQVQRDLEVASAELGLTHGALERQLPKEVKNGDVAWAIRQNKVLEQKVQQAAEELEEVTELLEQAQGGPR*
Ga0126305_1076348413300010036Serpentine SoilMSKVPSTEHIDIARSKTDQVQRDLEVASAELGLTHGALERQLPQEVKNGDVAWAIRQNKVLEQKVQQAAEELEEVTELLEQAQGGPR*
Ga0134124_1152048523300010397Terrestrial SoilMSQPPHQCIEQAKTKTEEVQRELEVASAELGLTHGALEREVPQTVKQKSDVAWAIRQNAELERKVQQAAEDLEHVTELLEQAQGGA*
Ga0126317_1050836923300011332SoilPPQPAIDQARSKTDQVQRDLEVASAELGLTHGALERELPPNVKKGDVAWALHQNKMLERKVQQAAEELEEVTELLEQVQARS*
Ga0151147_119968613300011426Elk FecesMHKNSPGAQLDQVSAKTDEVQRELEVASAELGLTHGALDRHLPPAQRNGDVAWAIAQNAALERKVAQAAEDLEEVVGMLEQVKAEVAG*
Ga0150985_10372846823300012212Avena Fatua RhizosphereMFMTSVPSQDPIDQARSKTDQVQRDLEVASAELGLTHGALDRELPPNVKKGDVAWALQQNKVLEQKVQQAAEELEEVTELLEQARGATP*
Ga0150985_10377461923300012212Avena Fatua RhizosphereVTSMSQVPSHPALEQAKSKTDQVQRDLEVASAELGLTHGALERELPPDAKQGDVAWAIHQNKVLERKVQQAAEELEEVTDLLEKAKAGDA*
Ga0150985_10615817313300012212Avena Fatua RhizosphereTLEQARSKSDQVQRDLEVASAELGLTHGALERELPPNVKKGDVEWALKQNKELERKVQQAAEELEEVTELLDQAKNGTP*
Ga0150985_10707589213300012212Avena Fatua RhizosphereGTPMNQHSQLEAARSRTDQVQRDLEVASAELGLTHGALERELPAHAKKGDVAWAIRQNAALEKKVQRAAEELEEVTELLEQAQARS*
Ga0150985_11006386713300012212Avena Fatua RhizosphereRTVMSQEPSHPAIEQAKSKTDQVQRDLEVASAELGLTHGALERELPSDVKQGDVAWAIHQNKLLERKVQQAAEELEEVTDLLEQVKGTPS*
Ga0150985_11098738523300012212Avena Fatua RhizosphereMSQLPSQPALENARSKTELVQRELEVASAELGLTHGAFERELPPDVKQGDVAWAIQQNKVLERKVQHAAEELEEVTELLEQARGGAA*
Ga0150985_11160483513300012212Avena Fatua RhizosphereQARSKTVEVQRELEVASAELGLTHGALERELPADVKRKGDVGWAIRQNAELERKMQQAAEDLEHVQELLEQVQGGA*
Ga0150985_11558938213300012212Avena Fatua RhizosphereKGLPMSQVPSHPSLAKARSKTDQVQRDLEVASAELGLTHGALDRELPPDVKQGDVAWALHQNKVLERKVQRAAEELEEVTELLDKAKGATP*
Ga0150985_12166728513300012212Avena Fatua RhizosphereERIVMSQVPSQPALERAKSKTDRVQRDLEVASAELGLTHGALERELPTDVKQGDVAWALHQNKVLERKVQQAAEELEEVTDLLDQAKGARA*
Ga0150985_12243221413300012212Avena Fatua RhizosphereMFMTASVPSQDPIDEARSRTDQVQRDLEVASAELGLTHGALERELPPNVKHGDVAWALHQNKVLEQKVQQAADELEEVTELLEQAKGANP*
Ga0150984_10262401323300012469Avena Fatua RhizosphereENARSKTELVQRELEVASAELGLTHGAFERELPPDVKQGDVAWAIQQNKVLERKVQHAAEELEEVTELLEQARGGAA*
Ga0150984_10744032823300012469Avena Fatua RhizosphereTVMSQMPPEPAIEQAKSKTDQVQRDLEVASAELGLTHGALERELPPDAKQGDVAWAIHQNKVLERKVQQAAEELEQVTDLLEKAKAGES*
Ga0150984_11001717623300012469Avena Fatua RhizosphereVIDQAKSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLEKKVQQAAEELEEVTELLDQAKNDPD*
Ga0150984_11485224913300012469Avena Fatua RhizospherePKIKQARSKTVEVQRELEVASAELGLAHGALERDLPADVKRKGDVGWAIRQNAELERKVQQAAEDLEHVTELLDQVQGGA*
Ga0150984_11549925613300012469Avena Fatua RhizosphereERNVMSQVPSQPEIEHARTKTELVQRELEVASAELGLTHGAFERELPANVKQGDVAWALQQNKVLERKVQQAAEELEEVTELLDRASGAKP*
Ga0123351_102483313300012973FecalMRKNSPGTQLAQVSAKTDDVQRELEVASAELGLTHGALDRHLPPAQRNDDVAWAIAQNAALERKVAQAAEDLEEVVGMLEQVKAEVGA*
Ga0134087_1007149023300012977Grasslands SoilMSQVPSQPELEHARSKTELVQRELEVASAELGLTHGAFERELPADVKQGDVAWAIQQNKVLERKVQHAAEELEEVTELLEQARGGAA*
Ga0167660_100110543300015078Glacier Forefield SoilMSDVQTPQEPLEEARAKTDEVQHELEVASAELGLTHGALERHLPADHRHGDVAWAIRQNAVLERKVQQAADDLEQVTELLEQAQQAAASGAP*
Ga0190272_1233272413300018429SoilMTQAQSTPQQSLEAARAKTEEVQQELEVASAELGLTHGALERHLPDDARSGDVSWAIEQNAALERKVQQAADDLEEVTELIEHAYRLHGAQPEQVGDHHVA
Ga0190269_1001100333300018465SoilMSQPPHPNIEQAKCKTAEVQRELEVASAELGLTHGALEREIPQTVKQKSDVAWAIRQNALLERKVQQAAEDLEHVTELLDQVQGSA
Ga0190269_1008878523300018465SoilMSAKIDAAKSKTEQVQRDLEVASAELGLTHGALERELPQEAKKGDVAWAIRQNEVLERKVQQAAEELEQVTEMLEQAKGGS
Ga0190269_1010815123300018465SoilMSAEIEAAKTKTEQVQRDLEVASAELGLTHGALERELPSHEKKGDVAWAIRQNAVLERKVQQAAEELEQVTDLLEQARARS
Ga0190271_1317036623300018481SoilMNSSPMETAREKTDKVQQDLVVASAELGLAHGALDRDVPKEVKEQGDVSWAMEQNAAVERKVRQAAEELEEVTELLDQAQRAA
Ga0184641_133586713300019254Groundwater SedimentQLEAARSRTDQVQRELEVASAELGLTHGALDRSVPPELRNDDVAWAIRQNAVLERKVKQAAEELEEVTELLDQAQGRS
Ga0196972_102138823300020131SoilMRGTNPKAIEAARRRTRKVQQELEVASAELVLTQGALHRHLPPAVKQGDVAWAMEQNAAVERKVNQAAEDLEQVQELLTQAGAAPSS
Ga0209129_101958313300025258Arabidopsis RhizosphereMTRNTSPAPLEQARSKTDQVQRDLEVASAELGLTHGALDRELPPDVKQGDVAWALRQNKKLERKVQQAAEELEEVTDLLDQAKAGGSGGDGRSRDPH
Ga0209673_101142133300025273Arabidopsis RootMTRNTSPAPLEQARSKTDQVQRDLEVASAELGLTHGALDRELPPDVKQGDVAWALHQNKKLERKVQQAAEELEEVTDLLDQAKAGGSGGDGRSRDPH
Ga0209673_101187633300025273Arabidopsis RootMRRKPSHAPLEKARTKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWAIHQNKKLEKKVQQAAEELEEVTDLLDQAKTGTPGGGGTRGDPH
Ga0207426_113590923300025302Arabidopsis RhizosphereMNQLPSQPVIDQAKSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKVLEKKVQQAAEELEEVTELLDQAKDDPA
Ga0207705_1024185833300025909Corn RhizosphereMSQHPQLDAARSRTDQVQRDLEVASAELGLTHGALERELPAHVKKGDVAWAIRQNAVLEKKVQQAAEELEEVAELLEQVQSRP
Ga0207675_10127921223300026118Switchgrass RhizosphereVPSPAPLEQARSKTDQVQRDLEVASAELGLTHGALERELPPQVKQGDVAWALHQNKVLERKVQQAAEELEEVSELLDQARAGNP
Ga0233369_102111033300028479Elk FecesMHKNSPGAQLDQVSAKTDEVQRELEVASAELGLTHGALDRHLPPAQRNGDVAWAIAQNAALERKVAQAAEDLEEVVGMLEQVKAEVAG
Ga0233380_103049633300028484Elk FecesMHKNSPGAQLDQVSAKTDEVQRELEVASAELGLTHGALDRHLPPAQRNDDVAWAIAQNAALERKVAQAAEDLEEVVGMLEQVKAEVGA
Ga0247828_1006171923300028587SoilMSRMPSQPQIDAARSKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWAIRQNKVLEEKVQQAADDLEEVTDMLEQAQQRQG
Ga0247828_1012672023300028587SoilMSQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKNGDVAWAIRQNKALEEKVQQAADELEEVTELLEQAQGGQR
Ga0247828_1017073423300028587SoilMSQRHHPKIEKAKQKTGEVQRELEVASAELGLTNGALERKIPADVKEQGDVAWAIKQNAQLERKVQQAAEDLDEVTELLDQAKDGA
Ga0247828_1108690713300028587SoilSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKHGDVAWAIRQNKALEEKVQQAAEELEEVTELLEQAQAGQR
Ga0247818_1057643423300028589SoilMSQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKHGDVAWAIRQNKALEEKVQQAAEELEEVTELLEQAQAGQR
Ga0247821_1034757513300028596SoilMTRMPPSPIEAAKAKNDQVQRDLEVASAELGLTHGALDRELPHEVKKGDVAWAIKQNKELEKKVQQAAEELEEVNE
Ga0247820_1040995633300028597SoilAKQKTGEVQRELEVASAELGLTNGALERKIPADVKEQGDVAWAIKQNAQLERKVQQAAEDLDEVTELLDQAKDGA
Ga0247819_1022498123300028608SoilMSKVPSTEHIDIARSKTDQVQRDLEVASAELGLTHGALERQLPPEAKHGDVAWAIRQNKVLEQKVQQAAEELEEVTELLEQVQGGPR
Ga0247825_1033651413300028812SoilSMSQRHHPKIEKAKQKTGEVQRELEVASAELGLTNGALERKIPADVKEQGDVAWAIKQNAQLERKVQQAAEDLDEVTELLDQAKDGA
Ga0247825_1040416413300028812SoilMSQLPTQQIEAAKNRTDKVQQDLEVASAELGLTHGALDRHLPPGTRSGDVAWAIEQNKILERKVQRAAEELEEVTEMLEQAQSPG
Ga0247825_1054242413300028812SoilLEERKAMSQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKHGDVAWAIRQNKALEEKVQQAAEELEEVTELLEQAQAGQR
Ga0247825_1063878623300028812SoilMNPVQSIPEPLDEARARADQVQRDLEVASAELGLAHGALERHLPPEAKKGDVEWAIKQNAEVEKKVREAADELEEVSELLHQAKTA
Ga0247825_1067955113300028812SoilMSQLPSQPPIEQARSKTDQVQRDLEVASAELGLTHGALERELPPGVKQGDVAWALHQNKVLEKKVQQAAEELEEVTELLDQANSGPNGTPRPGQGRD
Ga0247825_1138555623300028812SoilMSQPSQPTIDQARSKTDQVQRDLEVASAELGLTHGALERELPPGVKKGDVAWALHQNKALEKKVQQAAEELEEVTELLDQAKNDPA
Ga0247826_1141700513300030336SoilSMSQRHHPKIEKAKHKTGEVQRELEVASAELGLTNGALERKIPPDVKEQGDVAWAIKQNAELERKVQQAAEDLDEVTDLLDQAKDGA
Ga0307408_10013064443300031548RhizosphereMSAKIKAARSKTDQVQRELEVASAELGLTHGALERELPAEVKKGDVAWAIEQNAVLERKVRKAAEDLEEVTELLEQAQGRT
Ga0307408_10212923723300031548RhizosphereMSPKIDAARSKTDQVQRDLEVASAELGLTHGALERELPPEVKKGDVAWAIRQNAELERKVQQAAEELEEVAELLEQAKDGA
(restricted) Ga0255338_1001929103300031825Sandy SoilMSQPPQPEIEEAKARTEEVQRELEVASAELGLTHGALEREIPPAVKEKSDVAWAIRQNAVLERKVQQAAQDLEQVTELLEQAQGNE
Ga0310904_1071277423300031854SoilMSQPTHPIDQAKHKTSEVQHELEVACAELGLTHGALERELPADVKQQGDIAWAIRQNAELERKVQQAAEDLEEVTELLEQAKDGGA
Ga0310900_1022183513300031908SoilMSQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKHGDVAWAIRQNKALEEKVQQAAEELEEVTELLEQAQSGQR
Ga0307412_1047268533300031911RhizosphereMSKVPSTEHIEIARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKNGDVAWAIRQNKELEQKVQQAAEELEEVTELLEQAQGGPR
Ga0307412_1054293433300031911RhizosphereMSQVPNPQVEAARSKTDQVQRDLEVASAELGLTHGALERSLPSDVKHGDVAWAIRQNAELERKVQQAAEELEEVTELLEQVKGGA
Ga0307412_1089434423300031911RhizosphereMSAKIKAARSKTDQVQRELEVASAELGLTHGALERELPPEVKKGDVAWAIEQNAVLERKVQKAAEDLEEVTELLEHAQSRA
Ga0308175_10006055133300031938SoilMSQPPNPNIQQARSKTEEVQRELEVASAELGLTHGALEREIPQSVKQKEDVAWAIRQNAALERKVQQAAEDLEQVTELLEQAQGGG
Ga0308175_10130753623300031938SoilMSQAPSHPAIANARSKTDQVQRDLEVASAELGLTHGALERELPPNVKKGDVAWAIHQNKVLERKVQQAAEELEEVTEMLDQARGGR
Ga0308175_10161260613300031938SoilMFQMTSTPQPLEEARARTDQVQRDLEVASAELGLAHGALERHLPAQQRKGDVGWAIRQNAVLERKVQQAADELEQVTELLEQVQAEVQQAQSPPAADASAPS
Ga0308175_10199584223300031938SoilPVLDEAKSRTDQVQRDLEVASAELGLTHGALERELPAHVKKGDVAWAIRQNAALEKKVQQAAEELEEVTELLEQVKARS
Ga0308174_1016712233300031939SoilMSQVHPNIEQARSKTVEVQRELEVASAELGLAQGALERDIPPEIKSQGDVGWAIRQNAELERKVQQAAEDLEHVTELLDQVQGNA
Ga0308174_1049295523300031939SoilMSQHPQLDAARSRTDQVQRDLEVASAELGLTHGALERELPPELKKGDVAWAIRQNAALEKKVQQAAEELEEVTELLEQVQARS
Ga0308174_1057672933300031939SoilMSQDPQLDAARSRTDQVQRDLEVASAELGLTHGALERELPAHVKKGDVAWAIRQNAALEKKVQQAAEELEEVTELLEQVKARS
Ga0307411_1073335213300032005RhizosphereMSQLPTQNIEAAKNRTDKVQQDLEVASAELGLAHGALDRSLPANAKQGDVAWAIEQNKILERKVQRAAEELEEVTEMLEQAQGTG
Ga0308173_1008068143300032074SoilMTQVHPNIEQARSKTVEVQRELEVASAELGLAQGALERDIPPEIKSQGDVGWAIRQNAELERKVQQAAEDLEHVTELLDQVQGNA
Ga0308173_1049831023300032074SoilMSQAPSHPAIANARSKTDQVQRDLEVASAELGLTHGALERELPPNVKKGDVAWAIHQNKVLERKVQQAAEELEEVTEMLDQARGGRP
Ga0308173_1064241323300032074SoilMSQHPQLEAARSRTDQVQRDLEVASAELGLTHGALERELPPELKKGDVAWAIRQNAALEKKVQQAAEDLEEVTELLERAQARS
Ga0308173_1174345923300032074SoilMSKVPSTEHIDIARSKTDQVQRDLEVASAELGLTHGALERQLPPDVKNGDVAWAIRQNKVLEQKVQQAAEELEEVTELLEQAQGGPR
Ga0308173_1195847623300032074SoilDAARSRTDQVQRDLEVASAELGLTHGALERELPAHIKKGDVAWAIRQNAALERKVQQAAEELEEVTELLEQVQARS
Ga0308173_1227249223300032074SoilMSQDHQLDAARSRTDQVQRDLEVASAELGLTHGALERELPAHVKKGDVAWAIRQNAALEKKVQQAAEELEEVTELLEQVKARS
Ga0315910_1045684533300032144SoilMTQLPSQVPLEQARSKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWALRQNKVLERKVQQAAEELEEVTEMLDQARGGQP
Ga0315910_1068016323300032144SoilMSQAPSQPVLDHARSKTDQVQRDLEVASAELGLTHGALERELPPHVKKGDVAWALHQNKVLERKVQQAAEELEEVTELLDQARGGPA
Ga0315912_1027442023300032157SoilMSQMPPQPPLEQARSKTDQVQRDLEVASAELGLTHGALERELPPEVKQGDVAWALHQNKVLERKVQQAAEELEEVNELLDQARADNA
Ga0315912_1058496423300032157SoilMTQVPSQPPLEQARSKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWALHQNKVLERKVQQAAEELEEVNELLDQARADNA
Ga0307470_1188107813300032174Hardwood Forest SoilSQLPSPPPIDQARSKTDQVQRDLEVASAELGLTHGALERELPPDVKQGDVAWALHQNKVLERKVQQAAEELEEVNELLDQARADNA
Ga0335084_1027198333300033004SoilMKQVPSHPALEAARSRTDQVQQDLEVASAELGLTHGALERELPPDVKKGDVAWAIRQNKALERKVQQAAEELEEVTELLDQAKGARR
Ga0247829_1033466633300033550SoilMNQVQSIPEPLDEARAKTDQVQRDLEVASAELGLAHGALERHLPPKDRNNDVAWAIRQNAALERKVQQAADELEQVTELLEQAQQQAAAGGATGAP
Ga0247829_1046356513300033550SoilMSSLPTQSPIEEAKVRTGRVQKDLEVASAELGLTHGALDRSLPPEQRKGDVAWAIEQNRILEKKVQQAAEELEEVTELLSQAQ
Ga0247830_1010142333300033551SoilMSQVPSQEHIDAARSKTDQVQRDLEVASAELGLTHGALERQLPPEVKHGDVAWAIRQNKALEEKVQQAAEELEEVTDLLEQVQAGQR
Ga0372943_0425054_375_6263300034268SoilMNQHSQLDAARSRTDQVQRDLEVASAELGLTHGALERELPAHVKKGDVAWAIRQNAALEKKVQQAAEELEEVTELLEQVQARS
Ga0372946_0202086_305_5623300034384SoilMSLPTHHQLEAARSRTEEVQRDLEVASAELGLTHGALERELPAHVKRGDVAWALHQNAVLERKVQQAAEDLEEVTELLEQAKGRA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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