Metagenome / Metatranscriptome Family F084269

Basic Information
Family ID	F084269
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	48 residues
Representative Sequence	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQGN
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.26 %
% of genes near scaffold ends (potentially truncated)	41.07 %
% of genes from short scaffolds (< 2000 bps)	67.86 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (66.071 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (41.964 % of family members)
Environment Ontology (ENVO)	Unclassified (72.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.87% β-sheet: 0.00% Coil/Unstructured: 39.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01726	LexA_DNA_bind	30.36
PF10262	Rdx	18.75
PF00817	IMS	16.96
PF01569	PAP2	10.71
PF00717	Peptidase_S24	8.04
PF02784	Orn_Arg_deC_N	2.68
PF14579	HHH_6	2.68
PF07733	DNA_pol3_alpha	1.79
PF02811	PHP	1.79
PF11799	IMS_C	1.79
PF00704	Glyco_hydro_18	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	16.96
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	2.68
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	2.68
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	1.79
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	1.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Marinimicrobia bacterium JGI 0000077-B04	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium JGI 0000077-B04	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559018\|JCVI_READ_1299798	Not Available	989	Open in IMG/M
2166559018\|JCVI_READ_1363516	Not Available	981	Open in IMG/M
2236876001\|none_p331294	Not Available	501	Open in IMG/M
3300000148\|SI47jul10_100mDRAFT_c1006277	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300000188\|SI60aug11_150mDRAFT_c1031390	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300001939\|GOS2225_1031439	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300001952\|GOS2224_1015239	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300001956\|GOS2266_1050701	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300001971\|GOS2215_10034651	Not Available	1090	Open in IMG/M
3300001971\|GOS2215_10100331	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300002033\|GOS24894_10310279	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300002040\|GOScombined01_100047105	Not Available	1507	Open in IMG/M
3300002040\|GOScombined01_100255069	Not Available	1837	Open in IMG/M
3300002040\|GOScombined01_101952186	Not Available	1850	Open in IMG/M
3300002176\|JGI24820J26691_1019862	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300003474\|NAP4_1000519	All Organisms → cellular organisms → Bacteria	5419	Open in IMG/M
3300003645\|NAP1_1015008	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300004280\|Ga0066606_10358433	Not Available	510	Open in IMG/M
3300005404\|Ga0066856_10302046	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005510\|Ga0066825_10183694	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005522\|Ga0066861_10027593	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300005522\|Ga0066861_10181953	Not Available	722	Open in IMG/M
3300005523\|Ga0066865_10164553	Not Available	824	Open in IMG/M
3300005606\|Ga0066835_10036254	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300005837\|Ga0078893_10117757	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2327	Open in IMG/M
3300005837\|Ga0078893_10161406	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1023	Open in IMG/M
3300005946\|Ga0066378_10169034	Not Available	681	Open in IMG/M
3300005960\|Ga0066364_10001855	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	5717	Open in IMG/M
3300006026\|Ga0075478_10101041	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300006384\|Ga0075516_1421431	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	972	Open in IMG/M
3300006402\|Ga0075511_1815292	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	917	Open in IMG/M
3300006403\|Ga0075514_1013937	Not Available	737	Open in IMG/M
3300006405\|Ga0075510_11122893	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1155	Open in IMG/M
3300006616\|Ga0101440_115739	All Organisms → cellular organisms → Bacteria	6033	Open in IMG/M
3300007263\|Ga0101451_104755	All Organisms → cellular organisms → Bacteria	5638	Open in IMG/M
3300007329\|Ga0079240_1448317	Not Available	566	Open in IMG/M
3300007334\|Ga0079269_1053594	Not Available	523	Open in IMG/M
3300007341\|Ga0079228_1269342	Not Available	593	Open in IMG/M
3300007514\|Ga0105020_1010603	All Organisms → cellular organisms → Bacteria	9603	Open in IMG/M
3300007610\|Ga0102778_1252371	Not Available	528	Open in IMG/M
3300007613\|Ga0102799_1267808	Not Available	530	Open in IMG/M
3300007863\|Ga0105744_1072300	Not Available	850	Open in IMG/M
3300008993\|Ga0104258_1077361	Not Available	621	Open in IMG/M
3300009445\|Ga0115553_1043785	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2093	Open in IMG/M
3300009449\|Ga0115558_1093769	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300009497\|Ga0115569_10053996	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300011315\|Ga0138402_1016599	Not Available	734	Open in IMG/M
3300011331\|Ga0138384_1060451	Not Available	832	Open in IMG/M
3300012928\|Ga0163110_10108481	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300012954\|Ga0163111_11231346	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300013195\|Ga0116815_1062101	Not Available	539	Open in IMG/M
3300017818\|Ga0181565_10105096	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300017956\|Ga0181580_10253214	Not Available	1215	Open in IMG/M
3300017969\|Ga0181585_10054914	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	3100	Open in IMG/M
3300017985\|Ga0181576_10033678	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300018418\|Ga0181567_10069650	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300018423\|Ga0181593_10407251	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300018426\|Ga0181566_10058903	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300018428\|Ga0181568_10687079	Not Available	800	Open in IMG/M
3300019025\|Ga0193545_10065515	Not Available	757	Open in IMG/M
3300020238\|Ga0211492_1001084	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	5866	Open in IMG/M
3300020258\|Ga0211529_1082356	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300020261\|Ga0211534_1018092	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1244	Open in IMG/M
3300020267\|Ga0211648_1038147	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300020269\|Ga0211484_1002208	All Organisms → cellular organisms → Bacteria	5145	Open in IMG/M
3300020302\|Ga0211595_1010241	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300020306\|Ga0211616_1014629	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300020318\|Ga0211491_1102274	Not Available	509	Open in IMG/M
3300020320\|Ga0211597_1002424	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	5349	Open in IMG/M
3300020323\|Ga0211673_1048780	Not Available	791	Open in IMG/M
3300020325\|Ga0211507_1002078	All Organisms → cellular organisms → Bacteria	4550	Open in IMG/M
3300020351\|Ga0211601_1004966	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	4912	Open in IMG/M
3300020352\|Ga0211505_1007761	All Organisms → cellular organisms → Bacteria	2944	Open in IMG/M
3300020381\|Ga0211476_10000874	All Organisms → cellular organisms → Bacteria	19417	Open in IMG/M
3300020384\|Ga0211596_10253920	Not Available	524	Open in IMG/M
3300020391\|Ga0211675_10019885	All Organisms → cellular organisms → Bacteria	3506	Open in IMG/M
3300020393\|Ga0211618_10019478	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2973	Open in IMG/M
3300020396\|Ga0211687_10162420	Not Available	918	Open in IMG/M
3300020413\|Ga0211516_10040981	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300020414\|Ga0211523_10017269	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	3241	Open in IMG/M
3300020416\|Ga0211644_10335186	Not Available	624	Open in IMG/M
3300020420\|Ga0211580_10005936	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	5695	Open in IMG/M
3300020421\|Ga0211653_10175325	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	943	Open in IMG/M
3300020430\|Ga0211622_10304170	Not Available	683	Open in IMG/M
3300020431\|Ga0211554_10062688	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300020433\|Ga0211565_10113025	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300020437\|Ga0211539_10113627	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1093	Open in IMG/M
3300020445\|Ga0211564_10518559	Not Available	583	Open in IMG/M
3300020446\|Ga0211574_10010002	All Organisms → cellular organisms → Bacteria	4625	Open in IMG/M
3300020448\|Ga0211638_10021765	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300020449\|Ga0211642_10360739	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300020452\|Ga0211545_10065093	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300020455\|Ga0211664_10246025	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300020455\|Ga0211664_10271660	Not Available	786	Open in IMG/M
3300020456\|Ga0211551_10347335	Not Available	707	Open in IMG/M
3300020457\|Ga0211643_10198852	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300020457\|Ga0211643_10408820	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300020462\|Ga0211546_10025725	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2908	Open in IMG/M
3300020468\|Ga0211475_10521401	Not Available	568	Open in IMG/M
3300020469\|Ga0211577_10022247	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	4939	Open in IMG/M
3300020469\|Ga0211577_10138576	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1650	Open in IMG/M
3300020469\|Ga0211577_10241275	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300020475\|Ga0211541_10406334	Not Available	666	Open in IMG/M
3300021185\|Ga0206682_10032103	All Organisms → cellular organisms → Bacteria	3103	Open in IMG/M
3300023110\|Ga0255743_10105018	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300025694\|Ga0209406_1019479	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium JGI 0000077-B04	3032	Open in IMG/M
3300026081\|Ga0208390_1006752	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	3765	Open in IMG/M
3300026203\|Ga0207985_1004567	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	3825	Open in IMG/M
3300026270\|Ga0207993_1021451	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300028137\|Ga0256412_1331773	Not Available	559	Open in IMG/M
3300028671\|Ga0257132_1058336	Not Available	836	Open in IMG/M
3300031785\|Ga0310343_10198467	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1370	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	41.96%
Oceanic	Environmental → Aquatic → Marine → Oceanic	25.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.96%
Coastal	Environmental → Aquatic → Marine → Coastal	10.71%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.57%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	41.96%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.21%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.71%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.04%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	8.04%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.57%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.79%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.79%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	41.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	19.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	8.04%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	7.14%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.46%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	3.57%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.57%
Environmental And Host-Associated	Environmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated	1.79%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.79%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	1.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.89%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.89%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559018	Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean6 (GOS4441574)	Environmental	Open in IMG/M
2236876001	Marine microbial communities from Columbia River, CM, sample from CR-7km from mouth, GS312-0p1-CR7-chlmax	Environmental	Open in IMG/M
3300000148	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100m	Environmental	Open in IMG/M
3300000188	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 60 08/10/11 150m	Environmental	Open in IMG/M
3300001939	Marine microbial communities from Block Island, New York, USA - GS009	Environmental	Open in IMG/M
3300001952	Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300001971	Marine microbial communities from the Sargasso Sea - GS000c	Environmental	Open in IMG/M
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300002176	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m	Environmental	Open in IMG/M
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300003645	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 1	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005946	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006384	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006405	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006616	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ06 time point	Environmental	Open in IMG/M
3300007263	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ17 time point	Environmental	Open in IMG/M
3300007329	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 c16 Surf_B metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007334	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Surf_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007341	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S2 Surf_B metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007610	Marine microbial communities from the Southern Atlantic ocean - KN S15 Surf_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007613	Marine microbial communities from the Southern Atlantic ocean - KN S19 Surf_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300011315	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S21 Surf_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011331	Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013195	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_Metagenome	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019025	Metatranscriptome of marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001565 (ERX1399745-ERR1328126)	Environmental	Open in IMG/M
3300020238	Marine microbial communities from Tara Oceans - TARA_B000000475 (ERX556004-ERR599068)	Environmental	Open in IMG/M
3300020258	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949)	Environmental	Open in IMG/M
3300020261	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556096-ERR598970)	Environmental	Open in IMG/M
3300020267	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108)	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020302	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX555996-ERR599018)	Environmental	Open in IMG/M
3300020306	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX556014-ERR599098)	Environmental	Open in IMG/M
3300020318	Marine microbial communities from Tara Oceans - TARA_B000000475 (ERX556107-ERR598973)	Environmental	Open in IMG/M
3300020320	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556072-ERR598990)	Environmental	Open in IMG/M
3300020323	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX555979-ERR599120)	Environmental	Open in IMG/M
3300020325	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX556073-ERR598966)	Environmental	Open in IMG/M
3300020351	Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX555955-ERR599089)	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020384	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556023-ERR599110)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020456	Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300026081	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026203	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84 (SPAdes)	Environmental	Open in IMG/M
3300026270	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes)	Environmental	Open in IMG/M
3300028137	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028671	Metatranscriptome of marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ocean6-_02720950	2166559018	Environmental And Host-Associated	MFRLKNKKQRKNSLMVMRAISRIKKYEMNENSSCGSYNSLLKEQVN
Ocean6-_00240960	2166559018	Environmental And Host-Associated	RSNLRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGSYNPLLKEQTN
none_3312942	2236876001	Marine Estuarine	MFRLKSKKQRKITLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS
SI47jul10_100mDRAFT_10062772	3300000148	Marine	MFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS*
SI60aug11_150mDRAFT_10313901	3300000188	Marine	MFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAY
GOS2225_10314393	3300001939	Marine	MFRLKSKKQRKSSLIVLRAINRINRHEMSENHLYRAYDSFGRQQG
GOS2224_10152393	3300001952	Marine	MFRLKSKKQRKNSLIVVRAINRINRHEMSENHLYRAYDSFGRQQGSHSLTS*
GOS2266_10507013	3300001956	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSCGLHNPLLKEQVN*
GOS2215_100346513	3300001971	Marine	YKILTSNLRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGSYNPLLKEQVN*
GOS2215_101003311	3300001971	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTSERCP
GOS24894_103102795	3300002033	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYSPLLKEQVN*
GOScombined01_1000471053	3300002040	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMDENSSYGLYNPLLKEQGN*
GOScombined01_1002550692	3300002040	Marine	QRKNSLMVMRAISRIKKYEMNENSSCGSYNSLLKEQVN*
GOScombined01_1019521866	3300002040	Marine	YKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGSYNPLLKEQTN*
JGI24820J26691_10198622	3300002176	Marine	VFRLKNKKQRENSLIVMRAISRIKKYETNESSSYRLYNPLSKEQGN*
NAP4_10005193	3300003474	Estuarine	MFRLKNKKQRENSLIVMRAISRIKKYETNESSSYGLYNPLLKEQGN*
NAP1_10150082	3300003645	Estuarine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQRSQSLTS*
Ga0066606_103584332	3300004280	Marine	FYKLLTSNLRVINMFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS*
Ga0066856_103020462	3300005404	Marine	MFRLKNKKQRKNSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN*
Ga0066825_101836942	3300005510	Marine	MFRLKNKKQRENSLIVMRAISRIKKYETNESSSYGLYNPLLKEQVN*
Ga0066861_100275934	3300005522	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLSNQQGS*
Ga0066861_101819531	3300005522	Marine	FRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS*
Ga0066865_101645532	3300005523	Marine	MFRLKNKKQRKNSLMVMRAISRIKKYEMNENSSCGLYNSLLKEQVN*
Ga0066835_100362542	3300005606	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSCGLYNPLLKKQAN*
Ga0078893_101177574	3300005837	Marine Surface Water	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQAN*
Ga0078893_101614061	3300005837	Marine Surface Water	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS*
Ga0066378_101690342	3300005946	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN*
Ga0066364_100018554	3300005960	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMSENSSHGLYNPLLKEQGN*
Ga0075478_101010412	3300006026	Aqueous	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN*
Ga0075516_14214311	3300006384	Aqueous	FRLKNKKQRENSLIVMRAISRIKKYETNESSSYGLYNPLLKGQVN*
Ga0075511_18152921	3300006402	Aqueous	VYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN*
Ga0075514_10139372	3300006403	Aqueous	KMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQAN*
Ga0075510_111228931	3300006405	Aqueous	RVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN*
Ga0101440_1157396	3300006616	Marine Surface Water	MFRLKNKKQRKNSLIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS*
Ga0101451_1047558	3300007263	Marine Surface Water	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQAN*
Ga0079240_14483171	3300007329	Marine	FRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN*
Ga0079269_10535941	3300007334	Marine	NKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN*
Ga0079228_12693422	3300007341	Marine	FRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQAN*
Ga0105020_10106035	3300007514	Marine	MFRLKNKKQRKNSFIVLRAINRINKYEMNENDIYGAYNSLLNQQGSQSLTS*
Ga0102778_12523712	3300007610	Marine	NKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQAN*
Ga0102799_12678082	3300007613	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQVN*
Ga0105744_10723001	3300007863	Estuary Water	LFFYKLLTSNLRVINMFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSLGRQQGSHSLTS*
Ga0104258_10773611	3300008993	Ocean Water	KSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS*
Ga0115553_10437853	3300009445	Pelagic Marine	MFRLKSKKQRKSSLIVLRAINRINRYEMNENHLYRAYDSLGRKQGSHSLTS*
Ga0115558_10937693	3300009449	Pelagic Marine	MFRLKSKKQRKSSLIVLRAINRINRYEMNENHLYRAYDALGRKQGSHSLTS*
Ga0115569_100539961	3300009497	Pelagic Marine	MFRLKSKKQRKSSLIVLRAINRINRYEMNENHLYRAYDSLGRQQGSHSLTS*
Ga0138402_10165991	3300011315	Marine	KMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN*
Ga0138384_10604511	3300011331	Marine	YKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN*
Ga0163110_101084813	3300012928	Surface Seawater	MFKLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS*
Ga0163111_112313461	3300012954	Surface Seawater	MFRLKNKKQRKNSLMVMRAISRIKKYEMNENSLYGLYNPLLKDQGNEYLTS*
Ga0116815_10621012	3300013195	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNLLLKEQGN*
Ga0181565_101050964	3300017818	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNESSSYGLYNPLLKEQANQYLTS
Ga0181580_102532143	3300017956	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNTLLREQAN
Ga0181585_100549144	3300017969	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQAN
Ga0181576_100336784	3300017985	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN
Ga0181567_100696504	3300018418	Salt Marsh	MFKLKNKKQRENSLIVMRAISRIKKYEMNESSSYGLYNPLLKEQAN
Ga0181593_104072512	3300018423	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNENGSYGLHNPLLKEQAN
Ga0181566_100589034	3300018426	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNSLLREQAN
Ga0181568_106870792	3300018428	Salt Marsh	LRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN
Ga0193545_100655152	3300019025	Marine	GSNLRVYKMFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS
Ga0211492_10010844	3300020238	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS
Ga0211529_10823562	3300020258	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQVN
Ga0211534_10180923	3300020261	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYSPLLKEQVN
Ga0211648_10381473	3300020267	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSCGLYNSLLKEQVN
Ga0211484_10022084	3300020269	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYRLYNPLLKEQTN
Ga0211595_10102413	3300020302	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNSLL
Ga0211616_10146292	3300020306	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSCGLHNPLLKEQVN
Ga0211491_11022741	3300020318	Marine	KMFRLKNKKQRKNSLIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS
Ga0211597_10024241	3300020320	Marine	ILTSNLRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN
Ga0211673_10487802	3300020323	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENNSYGLYNPLLKEQGN
Ga0211507_10020785	3300020325	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQGN
Ga0211601_10049661	3300020351	Marine	IFFYKILTSNLRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQV
Ga0211505_10077614	3300020352	Marine	MFRLKSKKQRKNSLIVLRAINRINRHEMSENHLYRAYDSFGRQQGSHSLTS
Ga0211476_1000087415	3300020381	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQRSQSLTS
Ga0211596_102539202	3300020384	Marine	FYKILTSNLRVYKMFRLKNKKQRKNSFIVLRAISRINKYEMNGNDLYGAYNSLSNQQGSQSLTS
Ga0211675_100198852	3300020391	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMSENSSHRLYNPLLKEQGN
Ga0211618_100194784	3300020393	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN
Ga0211687_101624201	3300020396	Marine	MFRLKNKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSLGRQQGSHSLTS
Ga0211516_100409813	3300020413	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNPLLNQRGSQSLTS
Ga0211523_100172691	3300020414	Marine	IFFYKILTSNLRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQA
Ga0211644_103351861	3300020416	Marine	MFKLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQSLTS
Ga0211580_100059365	3300020420	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEKVN
Ga0211653_101753251	3300020421	Marine	INMFRLKSKKQRKNSLIVLRAINRINRHEMSENHLYRAYDSFGRQQGSHSLTS
Ga0211622_103041702	3300020430	Marine	KKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLKEQAN
Ga0211554_100626882	3300020431	Marine	MFRLKSKKQRKSSLIVLRAINRINRYEMNENHLYRAYDSLGRKQGSHSLTS
Ga0211565_101130253	3300020433	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSHRLYNPLLKEQTN
Ga0211539_101136273	3300020437	Marine	NSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN
Ga0211564_105185593	3300020445	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDIYGAYNSLLNQQ
Ga0211574_100100025	3300020446	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNLLLKEQVN
Ga0211638_100217653	3300020448	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMSENSSRGLYNSLLKEQVN
Ga0211642_103607392	3300020449	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSLYGLYNPLLKDQGN
Ga0211545_100650933	3300020452	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDIYGAYNSLLNQQGSQSLTS
Ga0211664_102460251	3300020455	Marine	MFRLKSKKQRENSLMVMRAISRIKKYEMNENSLYGLYN
Ga0211664_102716602	3300020455	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNGNDLYGAYNSLLNQQGSQSLTS
Ga0211551_103473352	3300020456	Marine	KQRKNSFIVLRAISRINKYEMNENDIYGAYNSLLNQQGSQSLTS
Ga0211643_101988521	3300020457	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDIYGAYNSLLSQQGS
Ga0211643_104088203	3300020457	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLR
Ga0211546_100257254	3300020462	Marine	SNLRVYKMFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNLLLKEQVN
Ga0211475_105214013	3300020468	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYG
Ga0211577_100222474	3300020469	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGAYNSLLNQQGSQS
Ga0211577_101385761	3300020469	Marine	RVINMFRLKSKKQRKNSLIVLRAINRINRHEMSENHLYRAYDSFGRQQGSHSLTS
Ga0211577_102412753	3300020469	Marine	MFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLT
Ga0211541_104063343	3300020475	Marine	MFRLKNKKQRKNSFIVLRAISRINKYEMNENDLYGSYNSLLNQQGSQSLTS
Ga0206682_100321032	3300021185	Seawater	MFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS
Ga0255743_101050181	3300023110	Salt Marsh	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPL
Ga0209406_10194792	3300025694	Pelagic Marine	MFRLKSKKQRKSSLIVLRAINRINRYEMNENHLYRAYDSLGRQQGSHSLTS
Ga0208390_10067523	3300026081	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMSENSSHGLYNPLLKEQGN
Ga0207985_10045674	3300026203	Marine	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSCGLYNPLLKKQAN
Ga0207993_10214513	3300026270	Marine	MFRLKNKKQRKNSLMVMRAISRIKKYEMNENSSCGLYNSLLKEQVN
Ga0256412_13317732	3300028137	Seawater	FRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS
Ga0257132_10583361	3300028671	Marine	INMFRLKSKKQRKNSLIVLRAINRINRYEMSENHLYRAYDSFGRQQGSHSLTS
Ga0310343_101984671	3300031785	Seawater	FRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084269

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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