Sample 3300007263

Basic Information
IMG/M Taxon OID	3300007263 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114916 \| Gp0124992 \| Ga0101451
Sample Name	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ17 time point
Sequencing Status	Permanent Draft
Sequencing Center	Australian Centre for Ecogenomics
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300007263 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0114916 | Gp0124992 | Ga0101451

Sample Name

Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ17 time point

Sequencing Status

Permanent Draft

Sequencing Center

Australian Centre for Ecogenomics

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	87976032
Sequencing Scaffolds	24
Novel Protein Genes	33
Associated Families	33

Dataset Contents

Total Genome Size

87976032

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Bathycoccus sp. RCC1105 virus BpV	1
All Organisms → Viruses → Predicted Viral	6
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1
Not Available	4
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium SCGC AAA298-D23	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → Viruses	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1
All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Bathycoccus sp. RCC1105 virus BpV

All Organisms → Viruses → Predicted Viral

All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon

Not Available

All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium SCGC AAA298-D23

All Organisms → cellular organisms → Bacteria → Proteobacteria

All Organisms → Viruses

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium

All Organisms → Viruses → unclassified viruses → Circular genetic element sp.

All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.

Ecosystem Assignment (GOLD)
Name	Exploring Phylogenetic Diversity In Port Hacking Ocean In Sydney, Australia
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water → Exploring Phylogenetic Diversity In Port Hacking Ocean In Sydney, Australia

Ecosystem Assignment (GOLD)

Name

Exploring Phylogenetic Diversity In Port Hacking Ocean In Sydney, Australia

Type

Environmental

Taxonomy

Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water → Exploring Phylogenetic Diversity In Port Hacking Ocean In Sydney, Australia

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → coastal water body → coastal sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

marine biome → coastal water body → coastal sea water

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	Port Hacking, Australia
Coordinates	Lat. (^o)	-34.1192	Long. (^o)	151.2267	Alt. (m)	N/A	Depth (m)	1
Location on Map

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Location Information

Location

Port Hacking, Australia

Coordinates

Lat. (^o)

-34.1192

Long. (^o)

151.2267

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F002399	Metagenome / Metatranscriptome	563	Y
F002682	Metagenome / Metatranscriptome	537	Y
F002915	Metagenome / Metatranscriptome	521	Y
F004603	Metagenome	431	Y
F007139	Metagenome / Metatranscriptome	357	Y
F007266	Metagenome / Metatranscriptome	354	Y
F008525	Metagenome / Metatranscriptome	332	Y
F019114	Metagenome	231	Y
F023756	Metagenome / Metatranscriptome	209	Y
F028183	Metagenome / Metatranscriptome	192	N
F032291	Metagenome / Metatranscriptome	180	Y
F036688	Metagenome / Metatranscriptome	169	N
F037681	Metagenome / Metatranscriptome	167	N
F040846	Metagenome / Metatranscriptome	161	N
F040851	Metagenome / Metatranscriptome	161	N
F049683	Metagenome / Metatranscriptome	146	N
F052547	Metagenome / Metatranscriptome	142	N
F056057	Metagenome / Metatranscriptome	138	N
F058202	Metagenome / Metatranscriptome	135	Y
F060422	Metagenome	133	N
F066701	Metagenome / Metatranscriptome	126	Y
F067707	Metagenome / Metatranscriptome	125	N
F073533	Metagenome / Metatranscriptome	120	N
F077304	Metagenome / Metatranscriptome	117	N
F078834	Metagenome	116	N
F080082	Metagenome / Metatranscriptome	115	N
F082267	Metagenome / Metatranscriptome	113	Y
F082635	Metagenome / Metatranscriptome	113	N
F082707	Metagenome	113	N
F083229	Metagenome / Metatranscriptome	113	Y
F084269	Metagenome / Metatranscriptome	112	N
F093745	Metagenome	106	N
F099122	Metagenome / Metatranscriptome	103	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0101451_100927	All Organisms → cellular organisms → Bacteria	9160	Open in IMG/M
Ga0101451_102782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5983	Open in IMG/M
Ga0101451_103033	All Organisms → cellular organisms → Bacteria	5598	Open in IMG/M
Ga0101451_103626	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Bathycoccus sp. RCC1105 virus BpV	3845	Open in IMG/M
Ga0101451_104377	All Organisms → Viruses → Predicted Viral	4685	Open in IMG/M
Ga0101451_104397	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2436	Open in IMG/M
Ga0101451_104755	All Organisms → cellular organisms → Bacteria	5638	Open in IMG/M
Ga0101451_105063	Not Available	2915	Open in IMG/M
Ga0101451_106132	All Organisms → Viruses → Predicted Viral	4220	Open in IMG/M
Ga0101451_106467	Not Available	5099	Open in IMG/M
Ga0101451_107639	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium SCGC AAA298-D23	2964	Open in IMG/M
Ga0101451_107640	All Organisms → cellular organisms → Bacteria → Proteobacteria	2822	Open in IMG/M
Ga0101451_107970	All Organisms → Viruses	2642	Open in IMG/M
Ga0101451_108460	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	5269	Open in IMG/M
Ga0101451_108490	Not Available	7917	Open in IMG/M
Ga0101451_109150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	4942	Open in IMG/M
Ga0101451_109739	All Organisms → Viruses → Predicted Viral	2968	Open in IMG/M
Ga0101451_109750	All Organisms → Viruses	2548	Open in IMG/M
Ga0101451_111338	All Organisms → Viruses → Predicted Viral	3673	Open in IMG/M
Ga0101451_111465	All Organisms → Viruses → Predicted Viral	2228	Open in IMG/M
Ga0101451_111859	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	2280	Open in IMG/M
Ga0101451_113100	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8399	Open in IMG/M
Ga0101451_114281	Not Available	2714	Open in IMG/M
Ga0101451_115424	All Organisms → Viruses → Predicted Viral	2703	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101451_100324	Ga0101451_10032415	F093745	MHLSKNKKTSFILNTLGIDMLSISEKLDNSVQTYVHCSLRDRILTLHSHSLDEYSERELELLSKIEASVSKESKKNRILELTWDDFLNNHELLNIEIILNFTNIKID
Ga0101451_100927	Ga0101451_10092712	F073533	IKRVPDIDFKIVLDVDKYLDGELDDWYKKLKLFVNGSVQFRRNYYKGVFDRISYNELCQKAYDDFHAPVVITPSFLTDRNARGKVEQHLANFRKDMLEQKIDDKWKEYYTFFDAKFNGYGCQNYSFYNGKLYVNPFLYDAIIQRTPFFETTMDENKLYDNIEYAQQVDDCNGCEYMMSCAERNVHMYMESRDLNSCVAIKEYMYATH*
Ga0101451_100927	Ga0101451_1009278	F077304	LTNFDFTKVLLEKKRPNIGEIELTLFENCHLNCAFCHHDKKSTVGLSREGMFSKIPLVEDHLKKMQGMVKTCQINMVGGELFQDRISDWAYDVYYDMLIEIKKLYDKYEQEIKVVWVTSFQFSKRDKVQKLLDDLNEADIPSYIICSYDFDGRPVRGPYGKNIEYFADYITSINMVATVPSIERFMKDDDEYFHYLYSKFDNFYFDDYIPDKGFDHLIPSDSLYLDFLTFIFHNYPDINPISDLIKNENNHMHCMALNKVTIFPNNSISNCRWDRYTKSDFNTPLNRQDNASMMQAYMDEHGCLSCKWWDKCGFRCYTQWDWKNRERDLPDCVMRMWFNYMDRIKSGKTQLVSA*
Ga0101451_100927	Ga0101451_1009279	F052547	MGIATDNKSHAQADKDFDLSFSEGHEIKVQFNCEILSGCEFKCKGCFVNKLGSNVGDFQRLNDAIDLFNENGYRVSTINIGPTDIFGNNNVLELLQDEIFRECLSKVTTIQFVTTLSEQIDLRVIDLLNSIPKKEGFMYDCNVVVEHPIVWGSLQSRLNMLNLFEDDLNYYFVYNMGNDDEDNEKVLDLSKVTDRYFDTILQLNPSFFRAPKSKVQKHMIEKWKSYDFSHDMYPXDQAQGGSLELNFTYCNERFFWTPFVYDIVMIGTDEFEVKEEWNINSWTKVKEDQFLNQLEYTAETEQCAMCPKQMTCIDKGVISYMKHHALTSCVFPDFIRSM*
Ga0101451_102782	Ga0101451_1027826	F082267	MDFYDEGSSWQIITFTVLTLGALIFQIGTKFDQWKNPEKYEFDWKAGLEEE*
Ga0101451_103033	Ga0101451_1030331	F082707	MWYHKKFKLQYDTNVFNEIIEYAERATWRQGYDQNGLLWNVEELPLNPKQFPILNELYEGLNTEFKRPSFFISNVKP
Ga0101451_103033	Ga0101451_1030333	F028183	LEETRSAPYCRELKTLWYDREYLLDHLENIDENNWYLFDCGHIRWTVQEAFNARRECKNYPFSEFHYELINLFTPAISFDTVLYTQTAIGGAPPHQDRNRPTALNFAIRGEFSDTSPQVFYDSFDRSTEKYRMTYEKNDITNEFAPWIFKGPEIHGVENKTEKNRIIITCAWRHNSYEDIEKRLLDGTLVNWEQNEKNKRIKFV*
Ga0101451_103626	Ga0101451_1036263	F067707	MTFLQNTSILLPVVFFTLYSGVKISQTNFYPGIDNLLNQNTLYGIIIMMHAMFGISPVSELPERTKAVASSVWFKLISLLIISFSATRDFEDAVLVLITFLGIVQLLRTKEERKKYPYIIV*
Ga0101451_104377	Ga0101451_1043773	F023756	MINPEFDHDWNDVSVFEKLPVRKTANPKRDDWKRDRKAARNAKRKMQEQSHA*
Ga0101451_104397	Ga0101451_1043971	F040846	MERFGPAFFMRPAYCVDCNKKPIKIKDADIQGGSVGMNVEDHICPECYWVMNTSSWERFRAGFLDGTFTVEEFENWERKTYMNGTFVSETLNQNS*
Ga0101451_104755	Ga0101451_1047558	F084269	MFRLKNKKQRENSLIVMRAISRIKKYEMNENSSYGLHNPLLREQAN*
Ga0101451_105063	Ga0101451_1050633	F083229	MAGCDKLNYDLDWNQIPVDHILKNMTPMTDTLNGAFGDFAKRYEDLGSDKKEQAKLFDNWYVLREQHLHRTKDLGEFDPRGYIENTAKNIAKPLKPFVRFYLLKAGQELKPHIDFATKSCMNFVYNKRFASIVVEGKPYPYGSFLLDNTKMHGIPACDEDRFIFSFSFFESYDEVRRRCGILEESS*
Ga0101451_106132	Ga0101451_1061323	F007139	MITTGTAKYVYLDSTEKFNGEDTGKYTLTVAVDDKEAKALEAEGVKVRTIQTEDGGSYKARKFSTRYPLSFDMVKTADGEAIGHDFGAESEVQVLWKKGNEHPQHGFATYLTAVKVMKRTEGYKSADEETNAFFA*
Ga0101451_106467	Ga0101451_1064673	F007266	MENTKPISDNSAMTISLPMIIQAVTFIVMLVWGYSQLNARISFLEYQVAMNEEHIIDLEEDAEKNQDAGIPADIKQNQRIEYLEREVDRLRN*
Ga0101451_107639	Ga0101451_1076392	F049683	MLLVNNVFIIFLLKFACESTMYLIKKEELSGTALWLKENFEAIFLWFCVICIVVSALFILKLYLNRQK*
Ga0101451_107640	Ga0101451_1076403	F080082	MRGKYSLYYDWIMEVGEERLVEQKFLKENFYSREDYTVFLFILLRFSKKLSSEIRDSTANKSDNKFIKSTFPNPKITGDELDEFIMQYYEKVKNLKHYGTTRRAISQQTNIPRTSVKRILDRLMKRKLVTVTKNDNLIVPTALARKKFSDYRKYLFTSFKRLNKIFNDSHLEYLNPNDPGL*
Ga0101451_107970	Ga0101451_1079702	F036688	MLEEELDDLTKRRLELDEIISDLYELKPLLEKCENDTLLKRYGKCESSTFSLSEWYIRTKPLLKDMVSWLKMYYEQKIEAHDNTENLKQKIKKLRHEVLASFNKS*
Ga0101451_108460	Ga0101451_1084601	F066701	MIRLNDTYAGYYTYDKDHSPSNVDFLRTEINLDILHGCDQMCPGCFIPRKNLTNADHLKDLYELLVNGCYHPDEIVIGPTDIFDAQNFEEIMNHEYMFKLYEISAIGFTSTLLQPYWVIKSKLEKIWSLYAHIKRIPDIDFKIVLDVDKYLDGELDDWYKKLKLF
Ga0101451_108490	Ga0101451_1084903	F040851	MQFQLVIGKKCQIKWKIQDGMDKWAEEVKNYRNWFSLVKVNCIRLDTGEVLIGWVKKLWNGDYRIEDAHICISEVKDGNMETNMAPWIPFAKEYTFTIKKGLIQTVFEPKPQLETNFKIATGNNSIRGQVRK*
Ga0101451_108856	Ga0101451_10885612	F032291	VIAVGVPLIAPVELSNERPDGSDGETDHDVTVPPLDVGVTVVIAVPLVNVNEFGVYVIEDGATSFTWIVMVVVPLPPGLVAVTV*
Ga0101451_108916	Ga0101451_10891617	F082635	MKSIFNLVCLAIVILASHYASANQNEFKINAEIIDYDPSKKIISLDGAISMTSDDFQISGITATISMNEEVISIEGNPARINLENPEKIFGEAKQIKYTPAKEISLVGEAVLRT
Ga0101451_109150	Ga0101451_1091501	F002915	GLMKKLLLLLIIPMLGLSKEVFINEQGVKIEYTKPSVSCIYDKEAYEGYLNTCLIVPNKEICAQTKYEMYICSNKNEIKKLEKKSKXXXXXXXXXXXXXXXXY*
Ga0101451_109739	Ga0101451_1097393	F099122	MTRLAQAYEDSKLLYFVTDGDGNCMLDRVSEVDARICAMKNGWSVGRHDVSPVTNYKPNEDLPFYNDDGTAITYANKDILTEEDFNEV*
Ga0101451_109739	Ga0101451_1097396	F037681	MTQEELTVKREDLYKSWGYDIENLPFGAHMWLAPEKETRQNPYSGVKVLLNPVELAIYDHLMQSYHDHIELGTGGDLVEARKLYQDFKKGKEWFIENNIRAYMDLID*
Ga0101451_109750	Ga0101451_1097503	F058202	MKSLRQIVELKKIDIIPDPEFQAGVRADYANPKSDGERNFVGKHLDNIQKTLHPAFKNEAEQDAVFKGGSVNKDHSKKASYKDDMDVEVYEAAIHFVQDNLTEENLVAFNSLLEELYDTALQFAMEVAEELEAEE*
Ga0101451_111338	Ga0101451_1113382	F002682	MGKQIGSEEKPFTFRSPIYKNSHGSKGANPRPGFYTQDYRDNWDRIFGKKKKAEENKD*
Ga0101451_111465	Ga0101451_1114653	F008525	MLTFKESFNEVLEAKLKLGGGEKVVKQMKNLGKKKNVEAVITQQKAGSKKFNLYIDGLKLDSYKDQASAEKAVTEFIKLMGA*
Ga0101451_111859	Ga0101451_1118591	F060422	IAGARVGKFERATADTDWETLANLTGDIAALKRTAQTLNNRLNGMNKAVVPQDQIIQQMIEHQNVEQIRRGG*
Ga0101451_113100	Ga0101451_11310010	F019114	MKHLKGRMEVARDEFYRNRRNRGFMSFWWSDXLHYVLGLEVAIADVSGKSINFEAIVKLLPSSMGSRSTIATVLDDFVARGYMCKTVGKDKRKRVYRICREPMQLLDNWFIERQRSLKAVS*
Ga0101451_113100	Ga0101451_11310014	F004603	MIFSININGSIVDWCYTINNQEKQYHQTWIPKLKDIQIITKDLNGLTVSEVKKTILEDIQPDIQMVRDNTNKKARARRQKNV*
Ga0101451_113100	Ga0101451_11310015	F002399	MNLRKSHKSVIGQLRKKYGLKDNTPIHKVEQIMTPEDWKTFSEALTFPNGKPTQRGK*
Ga0101451_114281	Ga0101451_1142812	F078834	VNGLLTAFLWFIALVCLALPAWLLYNSWNKGRLLNERLENCDDGLLTDSGVKVIQVMSAPLGTTVTENATLVAVPSNSNQII*
Ga0101451_115424	Ga0101451_1154243	F056057	MTQSGRQEIIKRLAEDYAERAAVLSMKFDEAYTRYVKRCERRTDENLLQQFTCANLGRVPVTTTAGRSDEYIITTGPDDCEDGVCKL*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007263: Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ17 time point

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences