NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084328

Metagenome Family F084328

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084328
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 72 residues
Representative Sequence MRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVANDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Number of Associated Samples 102
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.46 %
% of genes near scaffold ends (potentially truncated) 40.18 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(11.607 % of family members)
Environment Ontology (ENVO) Unclassified
(28.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.643 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 1.37%    Coil/Unstructured: 98.63%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF05402PqqD 37.50
PF05128DUF697 30.36
PF13471Transglut_core3 6.25
PF00664ABC_membrane 2.68
PF01145Band_7 1.79
PF13537GATase_7 1.79
PF00005ABC_tran 1.79
PF07015VirC1 0.89
PF11294DUF3095 0.89
PF09720Unstab_antitox 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG3768Uncharacterized membrane protein YcjF, UPF0283 familyFunction unknown [S] 30.36
COG1192ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQCell cycle control, cell division, chromosome partitioning [D] 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0993709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68604839Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0887927Not Available1855Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0889613All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0889804Not Available1236Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0889958All Organisms → cellular organisms → Bacteria1620Open in IMG/M
3300000156|NODE_c0735110All Organisms → cellular organisms → Bacteria → Proteobacteria9567Open in IMG/M
3300000787|JGI11643J11755_11681849All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300000881|JGI10215J12807_1178319All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300001430|JGI24032J14994_101130All Organisms → cellular organisms → Bacteria → Proteobacteria1214Open in IMG/M
3300003349|JGI26129J50193_1011299All Organisms → cellular organisms → Bacteria → Proteobacteria652Open in IMG/M
3300003911|JGI25405J52794_10011881All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300003995|Ga0055438_10000420All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales6214Open in IMG/M
3300004024|Ga0055436_10018085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1668Open in IMG/M
3300004114|Ga0062593_101398051Not Available748Open in IMG/M
3300004463|Ga0063356_101102348All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300004480|Ga0062592_100547818All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300005093|Ga0062594_100017292All Organisms → cellular organisms → Bacteria2891Open in IMG/M
3300005104|Ga0066818_1006754All Organisms → cellular organisms → Bacteria → Proteobacteria782Open in IMG/M
3300005159|Ga0066808_1014499Not Available736Open in IMG/M
3300005185|Ga0066811_1023559Not Available541Open in IMG/M
3300005213|Ga0068998_10010758All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300005290|Ga0065712_10069697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales6858Open in IMG/M
3300005331|Ga0070670_100045655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3767Open in IMG/M
3300005332|Ga0066388_100857915Not Available1492Open in IMG/M
3300005332|Ga0066388_106302220Not Available599Open in IMG/M
3300005339|Ga0070660_101293689All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005356|Ga0070674_101537307Not Available599Open in IMG/M
3300005365|Ga0070688_101187738All Organisms → cellular organisms → Bacteria → Proteobacteria613Open in IMG/M
3300005406|Ga0070703_10005575All Organisms → cellular organisms → Bacteria3522Open in IMG/M
3300005440|Ga0070705_100883616Not Available718Open in IMG/M
3300005455|Ga0070663_100372620All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300005456|Ga0070678_101223467Not Available697Open in IMG/M
3300005467|Ga0070706_100907353Not Available814Open in IMG/M
3300005530|Ga0070679_101453804Not Available632Open in IMG/M
3300005546|Ga0070696_100287713All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300005548|Ga0070665_101013314All Organisms → cellular organisms → Bacteria → Proteobacteria843Open in IMG/M
3300005549|Ga0070704_100873006All Organisms → cellular organisms → Bacteria → Proteobacteria808Open in IMG/M
3300005764|Ga0066903_105039635Not Available700Open in IMG/M
3300005834|Ga0068851_11023126Not Available522Open in IMG/M
3300006353|Ga0075370_10234461Not Available1086Open in IMG/M
3300006755|Ga0079222_12016218Not Available568Open in IMG/M
3300006806|Ga0079220_10355267Not Available934Open in IMG/M
3300006854|Ga0075425_100226522All Organisms → cellular organisms → Bacteria2151Open in IMG/M
3300006904|Ga0075424_101979822All Organisms → cellular organisms → Bacteria → Proteobacteria615Open in IMG/M
3300006914|Ga0075436_100542416Not Available853Open in IMG/M
3300009100|Ga0075418_11297059Not Available789Open in IMG/M
3300009131|Ga0115027_10947939All Organisms → cellular organisms → Bacteria → Proteobacteria670Open in IMG/M
3300009174|Ga0105241_10698928All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300010047|Ga0126382_10201475All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300010047|Ga0126382_10757210Not Available822Open in IMG/M
3300010359|Ga0126376_10308540Not Available1380Open in IMG/M
3300010359|Ga0126376_10406082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1229Open in IMG/M
3300010362|Ga0126377_10022523All Organisms → cellular organisms → Bacteria → Proteobacteria5211Open in IMG/M
3300010362|Ga0126377_10405825Not Available1375Open in IMG/M
3300010371|Ga0134125_11084981Not Available876Open in IMG/M
3300010399|Ga0134127_10365683Not Available1414Open in IMG/M
3300010401|Ga0134121_12657606Not Available545Open in IMG/M
3300011119|Ga0105246_11288014Not Available677Open in IMG/M
3300012489|Ga0157349_1020706Not Available619Open in IMG/M
3300012490|Ga0157322_1009364Not Available769Open in IMG/M
3300012885|Ga0157287_1025227Not Available806Open in IMG/M
3300012899|Ga0157299_10175004Not Available627Open in IMG/M
3300012909|Ga0157290_10057553All Organisms → cellular organisms → Bacteria → Proteobacteria1026Open in IMG/M
3300012915|Ga0157302_10532299Not Available514Open in IMG/M
3300012951|Ga0164300_10102686Not Available1258Open in IMG/M
3300015371|Ga0132258_11563466Not Available1665Open in IMG/M
3300015374|Ga0132255_100816006All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus → Oleiphilus messinensis1391Open in IMG/M
3300015374|Ga0132255_101604256Not Available986Open in IMG/M
3300015374|Ga0132255_105043966Not Available559Open in IMG/M
3300019356|Ga0173481_10039366All Organisms → cellular organisms → Bacteria → Proteobacteria1568Open in IMG/M
3300019356|Ga0173481_10070664Not Available1262Open in IMG/M
3300022893|Ga0247787_1035405All Organisms → cellular organisms → Bacteria → Proteobacteria708Open in IMG/M
3300022899|Ga0247795_1000259All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales9021Open in IMG/M
3300023072|Ga0247799_1061948Not Available635Open in IMG/M
3300023168|Ga0247748_1008820Not Available1310Open in IMG/M
3300025521|Ga0210083_1027667Not Available815Open in IMG/M
3300025551|Ga0210131_1094368Not Available519Open in IMG/M
3300025900|Ga0207710_10013538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603432Open in IMG/M
3300025910|Ga0207684_10477523All Organisms → cellular organisms → Bacteria → Proteobacteria1069Open in IMG/M
3300025912|Ga0207707_11601337Not Available513Open in IMG/M
3300025913|Ga0207695_10202213Not Available1900Open in IMG/M
3300025917|Ga0207660_10283226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601316Open in IMG/M
3300025919|Ga0207657_11337402Not Available540Open in IMG/M
3300025920|Ga0207649_10517673Not Available909Open in IMG/M
3300025924|Ga0207694_11879680Not Available502Open in IMG/M
3300025925|Ga0207650_10284630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1347Open in IMG/M
3300025930|Ga0207701_10379478All Organisms → cellular organisms → Bacteria → Proteobacteria1220Open in IMG/M
3300025936|Ga0207670_11293970Not Available618Open in IMG/M
3300025959|Ga0210116_1116436Not Available530Open in IMG/M
3300026452|Ga0256821_1005352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601194Open in IMG/M
3300026690|Ga0207494_102661Not Available520Open in IMG/M
3300026731|Ga0207523_102752Not Available526Open in IMG/M
3300026746|Ga0207454_100258Not Available1284Open in IMG/M
3300026751|Ga0207594_100324All Organisms → cellular organisms → Bacteria → Proteobacteria1665Open in IMG/M
3300026761|Ga0207495_100495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1052Open in IMG/M
3300026793|Ga0207441_103662Not Available639Open in IMG/M
3300026807|Ga0207547_100036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2067Open in IMG/M
3300026867|Ga0207475_1006982All Organisms → cellular organisms → Bacteria → Proteobacteria691Open in IMG/M
3300026891|Ga0208889_1004745Not Available829Open in IMG/M
3300027400|Ga0207560_101645All Organisms → cellular organisms → Bacteria → Proteobacteria801Open in IMG/M
3300027401|Ga0208637_1000154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3071Open in IMG/M
3300027411|Ga0207519_105558Not Available541Open in IMG/M
3300027424|Ga0209984_1000687All Organisms → cellular organisms → Bacteria → Proteobacteria3606Open in IMG/M
3300027876|Ga0209974_10077307Not Available1141Open in IMG/M
(restricted) 3300031150|Ga0255311_1028675Not Available1158Open in IMG/M
(restricted) 3300031248|Ga0255312_1020071All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1595Open in IMG/M
3300031716|Ga0310813_10009590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi6212Open in IMG/M
3300031720|Ga0307469_11371176Not Available673Open in IMG/M
3300031740|Ga0307468_100011962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3450Open in IMG/M
3300032211|Ga0310896_10100359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.1293Open in IMG/M
3300033004|Ga0335084_10446340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.1331Open in IMG/M
3300034692|Ga0373917_0020661All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil11.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.25%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands5.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.57%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.57%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.57%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.79%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.89%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.89%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.89%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300001430Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5EnvironmentalOpen in IMG/M
3300003349Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PMHost-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005104Soil and rhizosphere microbial communities from Laval, Canada - mgHACEnvironmentalOpen in IMG/M
3300005159Soil and rhizosphere microbial communities from Laval, Canada - mgLPBEnvironmentalOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005213Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012490Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610Host-AssociatedOpen in IMG/M
3300012885Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300022899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300023168Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5EnvironmentalOpen in IMG/M
3300025521Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025551Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026452Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4EnvironmentalOpen in IMG/M
3300026690Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026731Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026746Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026751Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2w-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026761Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026793Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026807Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026867Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026891Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes)EnvironmentalOpen in IMG/M
3300027400Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027401Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)EnvironmentalOpen in IMG/M
3300027411Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027424Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300034692Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_099370932228664021SoilMRPNKAGPGTSEARPVWEAPAFTKLPIVSRTGSSADSNASNGSSPRAVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
ICChiseqgaiiDRAFT_088792723300000033SoilMRPNKAGPSTSVAHPVWEAPTFTKLPIVSGTGSSAGSNAPNGSSPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
ICChiseqgaiiDRAFT_088961333300000033SoilMRPNKAGPGTSEARPVWEAPAFTKLPIVSRTGSSADSNASNGSSPRAVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
ICChiseqgaiiDRAFT_088980433300000033SoilMRPNKAGPSTSVAHPVWEAPTFTKLPIVSGTGSSAGSNAPNGSSPRVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
ICChiseqgaiiDRAFT_088995823300000033SoilMRPNKAGPGTSEARPVWEAPAFTKLPIVSRTGSSADSNASNASSPRVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
NODE_073511063300000156Sugar Cane Bagasse Incubating BioreactorMRPNNAAPGGSDAHPNWEAPAFTILPIASGTGSGANVANDPTPAVEPAAPGRPVSKLGFSFEWSFPMSTRN*
JGI11643J11755_1168184923300000787SoilMXPNKAGPXTSXARPVWEAPAFTKLPIVSRTGSSADSNASNGSSPRAVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
JGI10215J12807_117831933300000881SoilRPDLIEAKEVVWRSQMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
JGI24032J14994_10113033300001430Corn, Switchgrass And Miscanthus RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSE
JGI26129J50193_101129923300003349Arabidopsis Thaliana RhizosphereMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLG
JGI25405J52794_1001188113300003911Tabebuia Heterophylla RhizosphereMRPNNAAPSAPDARPEWEAPAFTKLPIAGLTGSDENVANGSSRAAEPATPGQPLSKLGFSFEWSLPMSTRD*
Ga0055438_1000042053300003995Natural And Restored WetlandsMRPNKAGPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRPDK*
Ga0055436_1001808543300004024Natural And Restored WetlandsMRPNKAGPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSR
Ga0062593_10139805113300004114SoilMRPNKADPSTSEAHPVWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0063356_10110234813300004463Arabidopsis Thaliana RhizosphereMRPNKADLSTSEAHPVWEAPTFTKLPIVSRTGSGANVAKDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0062592_10054781813300004480SoilMRPNKAGQSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0062594_10001729223300005093SoilMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGGSSAGSVASDGSSPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0066818_100675413300005104SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0066808_101449913300005159SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVANDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0066811_102355923300005185SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMS
Ga0068998_1001075833300005213Natural And Restored WetlandsMRPNKAGPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0065712_1006969743300005290Miscanthus RhizosphereMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGSSAGSVASDGSSPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0070670_10004565553300005331Switchgrass RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0066388_10085791523300005332Tropical Forest SoilMRPNNAAPSASGARPKWEAPAFTKLPIASGTGSGENVANGSPRVVEPAAPAQPHSKLGFSFEWSLPMSTRD*
Ga0066388_10630222023300005332Tropical Forest SoilMRPNNAAPSARPEWEAPAFTKLPIAGRTGSDENMANGARAIEPVPPGQPLSKLGFSFEWSLPMSTRD*
Ga0070660_10129368923300005339Corn RhizosphereMRPNNAAPGGSDAHPNWEAPAFTRLPIASGTGSGANVANEPTPAVEPAAPGRPVSKLGFSFEWSFPMSTRN*
Ga0070674_10153730713300005356Miscanthus RhizosphereVVWRSQMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0070688_10118773823300005365Switchgrass RhizosphereMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGGSSAGSVASDGSSPRVVEPAAPGQPLSK
Ga0070703_1000557543300005406Corn, Switchgrass And Miscanthus RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK*
Ga0070705_10088361613300005440Corn, Switchgrass And Miscanthus RhizosphereMRPNKAGPGTSEAHPVWEAPAFTKLPIVSRTGSSAGSNASNGSSPRVVEPAAPGLPLSKLGFSFEMAFPMSSRSDK*
Ga0070663_10037262013300005455Corn RhizosphereMRPNNAAPGGSDAHPNWEAPAFTRLPIASGTGSGANVANDPTPAVEPAAPGRPVSKLGFSFEWSFPMSTRN*
Ga0070678_10122346713300005456Miscanthus RhizosphereSQMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0070706_10090735333300005467Corn, Switchgrass And Miscanthus RhizosphereNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK*
Ga0070679_10145380423300005530Corn RhizosphereMRPNKAGPGTSEAHPVWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSTRN*
Ga0070696_10028771343300005546Corn, Switchgrass And Miscanthus RhizosphereNKAGPGTSEAHPVWEAPAFTKLPIVSRTGSSAGSNASNGSSPRVVEPAAPGLPLSKLGFSFEMAFPMSSRSDK*
Ga0070665_10101331423300005548Switchgrass RhizosphereMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSR
Ga0070704_10087300623300005549Corn, Switchgrass And Miscanthus RhizosphereMRPNKADPSTSEAHPVWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSSPMSSRSDK*
Ga0066903_10503963513300005764Tropical Forest SoilMRPNNAAPSARPEWEAPAFTKLPIASRTGSDENVANGPRAIEPAPPGQPLSKLGFSFEWSLPMSTRD*
Ga0068851_1102312613300005834Corn RhizosphereRPDLIEAKEVVRRSQMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK*
Ga0075370_1023446123300006353Populus EndosphereMRPNNAAPSAPGARPQWEAPAFTKLPIISGTGSDENVANGSARAVEPAAPGQPHSKLGFSFEWSLPMSTRD*
Ga0079222_1201621823300006755Agricultural SoilAPGGSDAHPNWEAPAFTRLPIASGTGSGANVANEPTPAVEPAAPGRPVSKLGFSFEWSFPMSTRN*
Ga0079220_1035526723300006806Agricultural SoilMRPNNAAPGTSDAPQGWEAPAFTKLPIASRTGSGANMANDSSRAAEPAAPGQPLSKLGFSFEWSFPMSSRADK*
Ga0075425_10022652223300006854Populus RhizosphereMRPNNAAPSAPGARPQWEAPAFTKLPITSGTGSDENVANGSARAVEPAAPGQPHSKLGFSFEWSLPMSTRD*
Ga0075424_10197982223300006904Populus RhizosphereMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGSSAGSVASDGSSPRVVEPAAPGQPLSKL
Ga0075436_10054241633300006914Populus RhizosphereRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK*
Ga0075418_1129705923300009100Populus RhizosphereMRPNNAAPSAPDARPEWEAPAFTKLSIASLTGSDENVANGSPRAAEPAAPGQPLSKLGFSFEWSLPMSTRD*
Ga0115027_1094793923300009131WetlandMRPNNAAPSASDARPDWEAPPVTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFE
Ga0105241_1069892833300009174Corn RhizosphereIEAKEVVWRSQMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0126382_1020147543300010047Tropical Forest SoilEVVWRSQMRPNNATPSAPDARPEWEAPAFTKLPIASLTGSDENVANGSPRAAEPAAPGQPLSKLGFSFEWSLPMSTRN*
Ga0126382_1075721013300010047Tropical Forest SoilPSAPDARPEWEAPAFTKLPIVSLTGSDENVANGSPRAAEPAAPGQPLSKLGFSFEWSLPMSTRD*
Ga0126376_1030854033300010359Tropical Forest SoilMRPNNAAPSASGARPKWEAPAFTKLPIASGTGSGENVANGSPGVVEPAAPAQPHSKLGFSFEWSLPMSTRD*
Ga0126376_1040608233300010359Tropical Forest SoilMRPNNAAPSAPDARPEWEAPAFTKLPIVSLTGSDENVANGSPRAAEPAAPGQPLSKLGFSFEWSLPMSTRN*
Ga0126377_1002252313300010362Tropical Forest SoilMRPNNAAPSAPDARPEWEAPAFRKLPIARRTGSDENVANGSPRAVEPMAPGQPLSKLGFSFEWSIPMATRD*
Ga0126377_1040582523300010362Tropical Forest SoilMRPNNAAPSAPDARPEWEAPAFRKLPIASRTGSDENVANGSPHAIEPVAPSQPLSKLGFSFEWSLPMSTRD*
Ga0134125_1108498133300010371Terrestrial SoilMRPNNAAPSASDAHPTWEAPTFKKLPIASRTGSGANVANDPSRAVEPVAPGQPLSKLGFSFEWSFPMSTRD*
Ga0134127_1036568333300010399Terrestrial SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDSARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0134121_1265760613300010401Terrestrial SoilMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGGSSAGSVASDGSSPRVVEPAAPGQPLSKLGFSFEW
Ga0105246_1128801423300011119Miscanthus RhizosphereMRPNNAAPSASDARPDWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0157349_102070613300012489Unplanted SoilPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0157322_100936423300012490Arabidopsis RhizosphereMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0157287_102522733300012885SoilPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFDMAFPMSSRSDK*
Ga0157299_1017500413300012899SoilRPDLIEAKEVVWRSQMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK*
Ga0157290_1005755323300012909SoilMRPNNAAPSASDARPTWEAPTFTKLPIASGTGSGANVANDPSRAVEPAAPGQPLSKLGFSFEWSLPMSTRD*
Ga0157302_1053229913300012915SoilAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0164300_1010268633300012951SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAVPMSSRSDK*
Ga0132258_1156346633300015371Arabidopsis RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAVEPEAPGQPLSKLGFSFEMSFPMSSRSDK*
Ga0132255_10081600643300015374Arabidopsis RhizosphereMRPNNAAPSASDARPDWEAPAFTNLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK*
Ga0132255_10160425613300015374Arabidopsis RhizosphereMRPNKADLSTSEAHPVWEAPAFMKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK*
Ga0132255_10504396623300015374Arabidopsis RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRPIEPEAPGQPLSKLGFSFEMSFPMSSRSEK*
Ga0173481_1003936633300019356SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK
Ga0173481_1007066443300019356SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0247787_103540523300022893SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAF
Ga0247795_100025913300022899SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEM
Ga0247799_106194813300023072SoilMRPNKADPSTSEAHPVWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0247748_100882013300023168SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPM
Ga0210083_102766713300025521Natural And Restored WetlandsMRPNKAGPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRPDK
Ga0210131_109436823300025551Natural And Restored WetlandsMRPNKAGPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0207710_1001353823300025900Switchgrass RhizosphereMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGGSSAGSVASDGSSPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0207684_1047752323300025910Corn, Switchgrass And Miscanthus RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0207707_1160133723300025912Corn RhizosphereLIEAKEVVRRSQMRPNNAAPGGSDAHPNWEAPAFTRLPIASGTGSGANVANEPTPAVEPAAPGRPVSKLGFSFEWSFPMSTRN
Ga0207695_1020221313300025913Corn RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEKESH
Ga0207660_1028322633300025917Corn RhizosphereMRPNKAGPGTSEAHPVWEAPAFTKLPIVSRTGSSAGSNASNGSSPRVVEPAAPGLPLSKLGFSFEMAFPMSSRSD
Ga0207657_1133740213300025919Corn RhizosphereDLIEAKEVVWRSQMRPNKADPSTSEAHPVWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0207649_1051767313300025920Corn RhizosphereMRPNNAAPGGSDAHPNWEAPAFTRLPIASGTGSGANVANEPTPAVEPAAPGRPVSKLGFSFEWSFPMSTRN
Ga0207694_1187968023300025924Corn RhizosphereHRRPDLIEAKEVVWRSQMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0207650_1028463023300025925Switchgrass RhizosphereMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0207701_1037947833300025930Corn, Switchgrass And Miscanthus RhizosphereMRPNKAGPGTSEAHPVWEAPAFTKLPIVSRTGSGPNVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0207670_1129397013300025936Switchgrass RhizosphereMRPIKAGPSTSGAHPVWEAPTFTKLPIVSRTGSSAGSVASDGSSPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0210116_111643613300025959Natural And Restored WetlandsSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRPDK
Ga0256821_100535233300026452SedimentMRPNKAGQSTSEAHPVWEAPAFTKLPIVSRTGSGANVADDPPRVAEPAAPGQPLSKLGFS
Ga0207494_10266123300026690SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLG
Ga0207523_10275213300026731SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPM
Ga0207454_10025833300026746SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMSFPMSSRSEK
Ga0207594_10032443300026751SoilKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK
Ga0207495_10049523300026761SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK
Ga0207441_10366223300026793SoilDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSSRSEK
Ga0207547_10003613300026807SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFEMSFPMSS
Ga0207475_100698213300026867SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEM
Ga0208889_100474513300026891SoilPSASDARPDWEAPAFTKLPIASRTGSGANVANDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0207560_10164513300027400SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDPSRAVEPVAPGQPLSKLGFSFEWSLPMSTRD
Ga0208637_100015423300027401SoilMRPNNAAPSASDARPDWEAPAFTKLPIASRTGSGANVANDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0207519_10555823300027411SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDPSRAVEPVAPGQPLSKLGFSFEW
Ga0209984_100068743300027424Arabidopsis Thaliana RhizosphereMRPNKAGPGTSEARPVWEAPAFTKLPIVSRTGSSADSNASNGSSPRAVEPAAPGQPLSKLGFSFEMSFPMSSRSEK
Ga0209974_1007730713300027876Arabidopsis Thaliana RhizosphereMRPNKAGPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
(restricted) Ga0255311_102867523300031150Sandy SoilMRPNNAAPSASDAHPDWEAPAFTKLPIANRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
(restricted) Ga0255312_102007123300031248Sandy SoilMRPNNAAPSASDARPDWEAPAFTKLPIANRTGSGANVASDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0310813_1000959083300031716SoilMRPNKADLSTSEAHPVWEAPTFTKLPIVSRTGSGANVAKDPPRVVEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0307469_1137117613300031720Hardwood Forest SoilMRPNNAAPSAPDARPEWEAPAFTKLPIASLTGSDENVANGSPRAAEPAAPGQPLSKLGFSFEWSLPMSTRD
Ga0307468_10001196233300031740Hardwood Forest SoilMRPNNAAPSAPDARPEWEAPAFSILPIASLTGSDENVANGSPRAAEPAAPGQPLSKLGFSFEWSLPMSTRD
Ga0310896_1010035913300032211SoilMRPKNAAPSVSDACPDWEAPAFTKLPIASRTGSGANVANDAPRAIEPEAPGQPLSKLGFSFE
Ga0335084_1044634013300033004SoilMRPNKADPSTSEAHPVWEAPAFTKLPIVSRTGSGANVANDPPRVIEPAAPGQPLSKLGFSFEWSFPMSSRSDK
Ga0373917_0020661_5_2353300034692Sediment SlurryMRPNKAGPGTSEAHPVWEAPAFTKLPIVSRTGSSADSNASNGSSPRVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK


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