Metagenome Family F089904

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089904
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	60 residues
Representative Sequence	MTEEVSEEIKKEIFDLISTPGVEIEEIAEKLNLDYDKVMKILSDEYLKHNLDYGRRMCCR
Number of Associated Samples	50
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	10.19 %
% of genes from short scaffolds (< 2000 bps)	56.48 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.222 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (32.407 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (34.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.32% β-sheet: 0.00% Coil/Unstructured: 55.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01557	FAA_hydrolase	18.52
PF14697	Fer4_21	10.19
PF00687	Ribosomal_L1	7.41
PF03946	Ribosomal_L11_N	6.48
PF01946	Thi4	3.70
PF01156	IU_nuc_hydro	3.70
PF00406	ADK	3.70
PF00037	Fer4	3.70
PF01339	CheB_methylest	2.78
PF00071	Ras	2.78
PF00466	Ribosomal_L10	2.78
PF00106	adh_short	1.85
PF09512	ThiW	1.85
PF01841	Transglut_core	1.85
PF01575	MaoC_dehydratas	0.93
PF10559	Plug_translocon	0.93
PF08713	DNA_alkylation	0.93
PF00428	Ribosomal_60s	0.93
PF00298	Ribosomal_L11	0.93
PF02223	Thymidylate_kin	0.93
PF10120	ThiP_synth	0.93
PF02776	TPP_enzyme_N	0.93
PF12773	DZR	0.93
PF13187	Fer4_9	0.93
PF13229	Beta_helix	0.93
PF01613	Flavin_Reduct	0.93
PF13240	zinc_ribbon_2	0.93
PF01884	PcrB	0.93
PF00132	Hexapep	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0080	Ribosomal protein L11	Translation, ribosomal structure and biogenesis [J]	7.41
COG0081	Ribosomal protein L1	Translation, ribosomal structure and biogenesis [J]	7.41
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	5.56
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	3.70
COG1635	Thiazole synthase/Archaeal ribulose 1,5-bisphosphate synthetase	Carbohydrate transport and metabolism [G]	3.70
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	3.70
COG0244	Ribosomal protein L10	Translation, ribosomal structure and biogenesis [J]	2.78
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.93
COG1646	Glycerol-1-phosphate heptaprenyltransferase	Lipid transport and metabolism [I]	0.93
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.93
COG2058	Ribosomal protein L12E/L44/L45/RPP1/RPP2	Translation, ribosomal structure and biogenesis [J]	0.93
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
All Organisms	root	All Organisms	27.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
cellular organisms	root	All Organisms → cellular organisms	27.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	25.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	10.19 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	7.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Candidatus Lokiarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	7.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Thermococci	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci	1.85 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
unclassified Lokiarchaeota	no rank	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota	6.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Thermococcales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales	1.85 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	6.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	1.85 %
Thermococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	6.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	1.85 %
Thermococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Thermococcus	0.93 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001751\|JGI2172J19969_10062617	Not Available	1177	Open in IMG/M
3300001752\|JGI2173J19968_10169691	Not Available	611	Open in IMG/M
3300001752\|JGI2173J19968_10215569	Not Available	532	Open in IMG/M
3300002052\|SMTZ1_10002650	Not Available	17985	Open in IMG/M
3300002052\|SMTZ1_10014785	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae	7682	Open in IMG/M
3300002052\|SMTZ1_10035805	All Organisms → cellular organisms → Bacteria	5924	Open in IMG/M
3300002465\|LO132_10083288	Not Available	1196	Open in IMG/M
3300003144\|Ga0052244_1013264	Not Available	628	Open in IMG/M
3300005613\|Ga0074649_1066157	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1462	Open in IMG/M
3300007533\|Ga0102944_1000539	Not Available	28873	Open in IMG/M
3300007900\|Ga0111031_1097842	Not Available	1375	Open in IMG/M
3300008516\|Ga0111033_1030808	All Organisms → cellular organisms → Archaea	2540	Open in IMG/M
3300008517\|Ga0111034_1265041	Not Available	4046	Open in IMG/M
3300009034\|Ga0115863_1003225	Not Available	25348	Open in IMG/M
3300009034\|Ga0115863_1003321	Not Available	24932	Open in IMG/M
3300009034\|Ga0115863_1021154	Not Available	8896	Open in IMG/M
3300009034\|Ga0115863_1074785	All Organisms → cellular organisms → Archaea	4273	Open in IMG/M
3300009034\|Ga0115863_1085669	Not Available	3958	Open in IMG/M
3300009034\|Ga0115863_1122988	All Organisms → cellular organisms → Archaea → Euryarchaeota	3204	Open in IMG/M
3300009034\|Ga0115863_1412707	All Organisms → cellular organisms → Archaea → Euryarchaeota	1562	Open in IMG/M
3300009034\|Ga0115863_1697588	All Organisms → cellular organisms → Archaea	1138	Open in IMG/M
3300009150\|Ga0114921_10074058	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	2200	Open in IMG/M
3300009150\|Ga0114921_11354377	Not Available	533	Open in IMG/M
3300009314\|Ga0117908_1038706	Not Available	4775	Open in IMG/M
3300009488\|Ga0114925_10001301	All Organisms → cellular organisms → Archaea	12198	Open in IMG/M
3300009488\|Ga0114925_10005830	All Organisms → cellular organisms → Archaea → Euryarchaeota	6555	Open in IMG/M
3300009488\|Ga0114925_10022151	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	3638	Open in IMG/M
3300009488\|Ga0114925_10022596	Not Available	3608	Open in IMG/M
3300009488\|Ga0114925_10072426	Not Available	2125	Open in IMG/M
3300009488\|Ga0114925_10140247	Not Available	1566	Open in IMG/M
3300009488\|Ga0114925_10828157	Not Available	666	Open in IMG/M
3300009488\|Ga0114925_10847740	Not Available	659	Open in IMG/M
3300009488\|Ga0114925_11266551	Not Available	543	Open in IMG/M
3300009499\|Ga0114930_10446698	Not Available	591	Open in IMG/M
3300009504\|Ga0114946_10311527	Not Available	828	Open in IMG/M
3300009529\|Ga0114919_10090775	Not Available	2225	Open in IMG/M
3300009788\|Ga0114923_10057849	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	2668	Open in IMG/M
3300009788\|Ga0114923_10225383	Not Available	1351	Open in IMG/M
3300009788\|Ga0114923_10398188	Not Available	1014	Open in IMG/M
3300009788\|Ga0114923_10471010	Not Available	932	Open in IMG/M
3300009788\|Ga0114923_11176550	Not Available	593	Open in IMG/M
3300010413\|Ga0136851_11381126	Not Available	679	Open in IMG/M
3300011118\|Ga0114922_10062409	All Organisms → cellular organisms → Archaea → Euryarchaeota	3233	Open in IMG/M
3300011118\|Ga0114922_10345441	All Organisms → cellular organisms → Archaea	1239	Open in IMG/M
3300011118\|Ga0114922_10881083	Not Available	729	Open in IMG/M
3300012002\|Ga0153774_1007324	Not Available	10935	Open in IMG/M
3300014903\|Ga0164321_10402698	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	674	Open in IMG/M
3300017963\|Ga0180437_10032861	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Thermococcus	5212	Open in IMG/M
3300017963\|Ga0180437_10283656	Not Available	1266	Open in IMG/M
3300017963\|Ga0180437_10323410	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1168	Open in IMG/M
3300017963\|Ga0180437_10687683	Not Available	742	Open in IMG/M
3300017971\|Ga0180438_10028911	All Organisms → cellular organisms → Archaea → Euryarchaeota	5737	Open in IMG/M
3300017971\|Ga0180438_10157997	Not Available	1846	Open in IMG/M
3300017990\|Ga0180436_10920838	Not Available	661	Open in IMG/M
3300017991\|Ga0180434_10525140	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300018080\|Ga0180433_10000907	Not Available	50484	Open in IMG/M
3300018080\|Ga0180433_10076039	Not Available	2984	Open in IMG/M
3300021468\|Ga0190360_1173000	Not Available	697	Open in IMG/M
3300021468\|Ga0190360_1274897	Not Available	500	Open in IMG/M
(restricted) 3300022938\|Ga0233409_10133114	Not Available	808	Open in IMG/M
3300024263\|Ga0209978_10107713	Not Available	1427	Open in IMG/M
3300024265\|Ga0209976_10003904	All Organisms → cellular organisms → Bacteria	8202	Open in IMG/M
3300024265\|Ga0209976_10039106	Not Available	2475	Open in IMG/M
3300024265\|Ga0209976_10214659	Not Available	1022	Open in IMG/M
3300024265\|Ga0209976_10346531	Not Available	789	Open in IMG/M
3300024432\|Ga0209977_10002868	All Organisms → cellular organisms → Archaea → Euryarchaeota	7802	Open in IMG/M
3300024432\|Ga0209977_10012050	All Organisms → cellular organisms → Archaea	4076	Open in IMG/M
3300024432\|Ga0209977_10049729	Not Available	2039	Open in IMG/M
3300024432\|Ga0209977_10058785	All Organisms → cellular organisms → Archaea	1870	Open in IMG/M
3300024432\|Ga0209977_10289266	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	789	Open in IMG/M
3300024432\|Ga0209977_10412431	Not Available	639	Open in IMG/M
3300024433\|Ga0209986_10222025	Not Available	931	Open in IMG/M
3300027811\|Ga0256868_10025926	Not Available	2759	Open in IMG/M
3300027888\|Ga0209635_10041163	Not Available	3761	Open in IMG/M
3300027888\|Ga0209635_10127469	Not Available	2085	Open in IMG/M
3300027888\|Ga0209635_10141571	Not Available	1970	Open in IMG/M
3300027888\|Ga0209635_10152000	Not Available	1894	Open in IMG/M
3300027888\|Ga0209635_10417790	Not Available	1040	Open in IMG/M
3300027888\|Ga0209635_10649835	Not Available	779	Open in IMG/M
3300027888\|Ga0209635_10672201	Not Available	762	Open in IMG/M
3300027888\|Ga0209635_10969397	Not Available	591	Open in IMG/M
3300027893\|Ga0209636_10791319	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	728	Open in IMG/M
3300027901\|Ga0209427_10017151	Not Available	7709	Open in IMG/M
3300027901\|Ga0209427_10017265	All Organisms → cellular organisms → Archaea	7682	Open in IMG/M
3300027901\|Ga0209427_10020560	Not Available	6913	Open in IMG/M
3300027901\|Ga0209427_10112627	Not Available	2407	Open in IMG/M
3300027901\|Ga0209427_10222637	Not Available	1560	Open in IMG/M
3300027901\|Ga0209427_10681164	Not Available	745	Open in IMG/M
3300027901\|Ga0209427_10902226	Not Available	614	Open in IMG/M
3300027917\|Ga0209536_100460813	Not Available	1587	Open in IMG/M
3300027917\|Ga0209536_100970766	Not Available	1048	Open in IMG/M
3300027917\|Ga0209536_101752428	Not Available	750	Open in IMG/M
3300031255\|Ga0315554_1233848	Not Available	596	Open in IMG/M
3300031281\|Ga0307420_1234024	Not Available	564	Open in IMG/M
3300031359\|Ga0307426_1072093	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1362	Open in IMG/M
3300031552\|Ga0315542_1023526	Not Available	2762	Open in IMG/M
3300031652\|Ga0315553_10071084	Not Available	1851	Open in IMG/M
3300031652\|Ga0315553_10131757	Not Available	1206	Open in IMG/M
3300031653\|Ga0315550_1125790	Not Available	1055	Open in IMG/M
3300031746\|Ga0315293_10020939	Not Available	5856	Open in IMG/M
3300032020\|Ga0315296_10674362	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	522	Open in IMG/M
3300032156\|Ga0315295_10374765	Not Available	1447	Open in IMG/M
3300033489\|Ga0299912_10013474	All Organisms → cellular organisms → Archaea → Euryarchaeota	6908	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.22%
Terrestrial	Environmental → Terrestrial	2.78%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	80.56%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	11.11%
Freshwater	Environmental → Aquatic → Freshwater	4.63%
Soil	Environmental → Terrestrial → Soil	2.78%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	55.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.67%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	10.19%
Coastal	Environmental → Aquatic → Marine → Coastal	3.70%
Lake	Environmental → Aquatic → Freshwater → Lake	2.78%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Microbialites	Environmental → Aquatic → Freshwater → Microbialites	0.93%
Inlet	Environmental → Aquatic → Marine → Inlet	0.93%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	55.56%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.26%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	9.26%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	7.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.78%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.78%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Microbialites → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.93%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.93%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.93%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	32.41%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	23.15%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	9.26%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	7.41%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	6.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.78%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	2.78%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.78%
Hydrothermal Vent Microbial Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Vent Microbial Mat	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Microbialites → Unclassified → Freshwater Lake	0.93%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.93%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.93%
Saline Lake Microbial Mat	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Saline Lake Microbial Mat	0.93%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Pond Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001752	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300002052	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300002465	Anoxic frehswater biofilm from Lago dell Orsa, Frasassi caves, Italy	Environmental	Open in IMG/M
3300003144	Marine sediment microbial communities from deep subseafloor - Sample from 18.6 mbsf	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300007533	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_D_shore_MG	Environmental	Open in IMG/M
3300007900	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf. Combined Assembly of MM1PM1	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009150	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG	Environmental	Open in IMG/M
3300009314	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 900m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009788	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012002	Saline lake microbial mat microbial communities from Tebenquiche Lake, II Region de Antofagasta, Chile - Tebenquiche 201212	Environmental	Open in IMG/M
3300014903	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay12, Core 4567-28, 21-24 cm	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300017990	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_2 metaG	Environmental	Open in IMG/M
3300017991	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300021468	Hydrothermal vent microbial mat bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4872-18-3-4_MG	Environmental	Open in IMG/M
3300022938 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MG	Environmental	Open in IMG/M
3300024263	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)	Environmental	Open in IMG/M
3300024265	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG (SPAdes)	Environmental	Open in IMG/M
3300024432	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031281	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-40	Environmental	Open in IMG/M
3300031359	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40	Environmental	Open in IMG/M
3300031511	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-20	Environmental	Open in IMG/M
3300031552	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-20	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031653	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-90	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032029	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-170	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI2172J19969_100626172	3300001751	Marine Sediment	MSLEVSEEVKKEIFQLIATPGIEIEDISKKTNLDQDTILKILSEEYLKCNLDHGRRLCCRF*
JGI2173J19968_101696912	3300001752	Marine Sediment	MTEEISDKIKKEIFKLISTPGVEIEEIAEKVNSAYHSNLNYEKVMNILS
JGI2173J19968_102155691	3300001752	Marine Sediment	EIFRLICIPGTCIEEIAKKLNLDYDKVKEILSEEFLKHNLDHGRRLCCRF*
SMTZ1_1000265019	3300002052	Marine Sediment	MMTSEINENIKQEIFRLICIPGTCIEEIAKKLNLDYDKVKEILSEEFLKHNLDHGRRLCCRF*
SMTZ1_100147857	3300002052	Marine Sediment	MCMEFSEEVKKKICELISKPGITIEDISKEVNLDYDTIMRILSEEYFKYNLDYGRRLCCRF*
SMTZ1_100358054	3300002052	Marine Sediment	MTEEVSEDIKKEIFILISTPGIEIQDIAEKLNLDYDRVMNILADEYFKHNLDYGRRMCCRF*
LO132_100832881	3300002465	Freshwater Lake	MTLEVSKDVKEEIFKLISIPGIEIEDIAKKVNLDQETVMKVLSDEYFRTDLTHGRRLCCRF*
Ga0052244_10132642	3300003144	Marine Sediment	MTVEVSEEVKKEIFKLIATPGIEIDDIVKKTKLDSETILNILSEEYLRCNLDHGKSLCCR
Ga0074649_10661573	3300005613	Saline Water And Sediment	MTEEVSEETKKEILQLISTPGVEVQDIAEKLNLEYEKVMNVLSDEYLKHNLDYGRRMCCRF*
Ga0102944_100053928	3300007533	Pond Soil	MIEVNEETKKTIFELITVPGMDIEDIAKKLNLDYQTVHEILSEEYLKNNLDYGRRLCCRWT*
Ga0111031_10978423	3300007900	Marine Sediment	MSSEVSEEIKQTIFRLISEPGVEIEDIVKEVELDRETVMNILTDEYSKNDLDQGRRLCCRF*
Ga0111033_10308084	3300008516	Marine Sediment	KKKIFDLISTPGIEIEDIIEKVNLDCDTIMKILSEEYFKCNLDHGRSLCCR*
Ga0111034_12650413	3300008517	Marine Sediment	MSIEVSEEVKKKICELISTPGIGIEDISKEVNLDYDTVMKTLSEEYFKYNLDHGRSLCCRF*
Ga0115863_100322530	3300009034	Sediment, Intertidal	MNSEVSEEVKKVIFDLISTPGIEIEDIINRVNLDYDTILNILSEEYFKCNLDHGHRLCCRF*
Ga0115863_100332128	3300009034	Sediment, Intertidal	MEVNKEVIKKICELISTPGTEIEDIAKEVNLDYDTVMKILSEEYFKCNLDYGRRLCCRF*
Ga0115863_102115411	3300009034	Sediment, Intertidal	MEVNKEVIKKICELISTPGTEIEDIAKEVNLDYDTVMKILSEEYFKCNLDYGRRLCCRWRACKF*
Ga0115863_10747856	3300009034	Sediment, Intertidal	MNPEISEEIKKEIFDLISTPGIELEDIIKKVDLDYDTILDILSEEYFKCNLDHGRRLCCRF*
Ga0115863_10856691	3300009034	Sediment, Intertidal	MTSDVNEETKKEIFRLISTPGIEIEDIVKQVNLDYDTVMKILCDEYLRNNLDYGRRLCCRF*
Ga0115863_11229884	3300009034	Sediment, Intertidal	MSIEITEEVKNEIFKLISTPGVEIEEIAEKVNLDCNIVMKILEDEYFRHNLDYGRRLCCRY*
Ga0115863_14127071	3300009034	Sediment, Intertidal	FFVIMSIEITEEVKNEIFKLISTPGVEIEEIAEKVNLDCNIVMKILEDEYFRHNLDYGRRLCCRY*
Ga0115863_16975881	3300009034	Sediment, Intertidal	FTLVNMEVNKEVIKKICELISTPGTEIEDIAKEVNLDYDTVMKILSEEYFKCNLDYGRRLCCRF*
Ga0114921_100740584	3300009150	Deep Subsurface	MNSDVDEETKKEIFKLISTPGIEIEDIVERVNLDYDKVMKILSDEYLRNNLDYGRRLCCRF*
Ga0114921_102862873	3300009150	Deep Subsurface	MNSEVSEEVKKEIFNLISTPGIEIEDIIKKVKLNYDTILNILSEEYFRCNLDHGRRLCCKF*
Ga0114921_113543771	3300009150	Deep Subsurface	MISDVNEETKKEIFKLISTPGIEIQDIVERVNLDYDQVMKILSDEYLRNNLDYGRSLCCRF*
Ga0117908_10387062	3300009314	Marine	MIDVDLKKKIFELISTPGIEVEDIAKSVNLEFDEVMEILSEEYLRTNLDFGRRLCCR*
Ga0114925_100013019	3300009488	Deep Subsurface	MPAEISEDIKKQIFKMISTPGVEISDIAKKLSLDYDKVVEILADEYLKHNLDYGRRMCCRF*
Ga0114925_100058304	3300009488	Deep Subsurface	MTVEVSEEVKKEIFQLIATPGIDIEEISKKINLDQDTILKILSEEYFKCNLDHGRRLCCRF*
Ga0114925_100221513	3300009488	Deep Subsurface	MISDVNEETKKEIFRLISTPGIEIKDIVERVNLDYDKVMKILSDEYLRNNLDYGRRLCCRF*
Ga0114925_100225965	3300009488	Deep Subsurface	MSDDVSEDVKKEIFRLICQPGTEIEDIAKILNLDNEKIMEILSNEYLKTNLDHGRRLCCRF*
Ga0114925_100724262	3300009488	Deep Subsurface	MTEEVSEDVKKEIFRLISIPGIEIDDIVKQLNLDYDKVMKILENEYLRANLDYGRRLCCRF*
Ga0114925_101402472	3300009488	Deep Subsurface	VTEEVSEEIKKEIFELISTPGVEIEEIAEKLNLDYDQVMKILSDEYLKHNLDYGRRMCCRF*
Ga0114925_108281571	3300009488	Deep Subsurface	MTEEVSEEIKKEIFDLISTPGVEIEEIAEKLNLDYDEVMKILSDEYLKHNLDYGRRMCCRF*
Ga0114925_108477401	3300009488	Deep Subsurface	MSVNVSEEVKKEIFDLISIPGMEIEDIAKKVSLDYDTIIKILSDEYLKNNLDYGRRLCCRF*
Ga0114925_112665512	3300009488	Deep Subsurface	MTEEVSEDVKKEVFRLISIPGIEIDDIVKQLNLDYDKVMKILENEYLKANLDYGRRLCCRF*
Ga0114930_104466981	3300009499	Deep Subsurface	MTVEVSEEVKKEIFQLIATPGIEIEDISKKTNLDHDTILKILSEEYLRCNLDFGRSLCCR
Ga0114946_103115272	3300009504	Sediment	MKELSEDIKKKIFELITVPGIEIKEISETLNIDYDTVMEILCNEYFKHNLDHGRRLCCR*
Ga0114919_100907751	3300009529	Deep Subsurface	MTEEISEEIKKEIFQLICQPGIEIEDIAKSVNLDFDKVMEILTNEYSRNDLDYGRRLCCRF*
Ga0114923_100578492	3300009788	Deep Subsurface	MTEEVSEEVKKQIFKLISTPGVQIEDIVEKVNLDYDKVMNILEDEYLRHNLDYGRRLCCRF*
Ga0114923_102253833	3300009788	Deep Subsurface	MKSEISEEVEKEIFKLISTPGVEIEDIIKKLNLDYDTVMNILSEEFLKHDFNQGRRLCCRF*
Ga0114923_103981882	3300009788	Deep Subsurface	MTEEVSEEIKKEILALISIPGVEIEEIAEKLNLNYDKVMKILSDEYLKYNLDYGRRMCCRF*
Ga0114923_104710102	3300009788	Deep Subsurface	MVAEVSEEVKKEIFKLICTPGIEIEDIAKKVELNYDTVMKILSDEYLKNNLDYGRRLCCRF*
Ga0114923_111765502	3300009788	Deep Subsurface	MTEEVSEEIKKEIFDLISTPGVEIEEIAEKLNLDYDKVMKILSDEYLKHNLDYGRRMCCRF*
Ga0136851_113811262	3300010413	Mangrove Sediment	MTEVSEEIKKKIFELIIVPGIEIQEIAEKVNLDFDTVMEVLSDEYLRHNLDYGRRLCCR*
Ga0114922_100624096	3300011118	Deep Subsurface	MTEEVSEEIKKEILELISIPGVEIEEIAEKLNLDHDKVMKILSDEYFKHNLDHGRRMCCRF*
Ga0114922_103454412	3300011118	Deep Subsurface	MTTEVSEEVKKEIFELISTPGTEIVDIAEKLNLEYDKVMDILANEYLKNNLDHGRKLCCRF*
Ga0114922_108810832	3300011118	Deep Subsurface	MTLEVSEEVKKEIFQLIATPGIEIEDISKKVNLDCETILNILSEEYFKCNLDHGRRLCCRF*
Ga0153774_10073248	3300012002	Saline Lake Microbial Mat	MSEEVPEEIKKKIFKMISTPGTDIEEIANEVNLEFDQVMEILSEEYLRSNLDYGRRLCCRF*
Ga0164321_104026981	3300014903	Marine Sediment	MTEEVSEEIRNQIFELISTPGIELEEIAEKVNLDYEKVKEILTDECLRHNLDYGRRLCCR
Ga0180437_100328615	3300017963	Hypersaline Lake Sediment	MSLEVSEEIKQTIFRLISEPGVEIEDIVKKVNLDRDTVMKILSDEYTRNDLDQGRRLCCR
Ga0180437_102836562	3300017963	Hypersaline Lake Sediment	MVEEVTEDIKKEIFKLISTPGIEIQDIATKLNIDYDRVMKILSDEYLKHNLDYGRRMCCR
Ga0180437_103234102	3300017963	Hypersaline Lake Sediment	MTEEVSEEIRNQIFELICTPGIEIEEIAEKVNLDYDKVKEILTDECLRHNLDYGRRLCCR
Ga0180437_106876831	3300017963	Hypersaline Lake Sediment	MTQDISEETKKQIFKLISTPGIEIKDIAEKLNLDYDQVMKILADEYLKHNLDYGRRMCCR
Ga0180438_100289116	3300017971	Hypersaline Lake Sediment	MSLEVSEEIKQTIFRLISEPGVEIEDIIKKVNLDLNTVMKILSDEYTRNDLDQGRRLCCR
Ga0180438_101579974	3300017971	Hypersaline Lake Sediment	EEVSEEIRNQIFELICTPGIEIEEIAEKVNLDYDKVKEILTDECLRHNLDYGRRLCCR
Ga0180436_109208382	3300017990	Hypersaline Lake Sediment	MSSEVSEEIKQTIFRLISEPGVEIEDIVKKVNLDRDTVMKILSDEYTRNDLDQGRRLCCR
Ga0180434_105251402	3300017991	Hypersaline Lake Sediment	MSLEVSEEIKQTIFRLISEPGVEIEDIVKKVNLDRDTVMKILSDEYTKNDLDHGRRLCCR
Ga0180433_1000090745	3300018080	Hypersaline Lake Sediment	MSSEVSEEIKQMIFRLISKPGMEIEDIVEKVNLDRDTVMKILSDEYTKNDLDHGRRLCCR
Ga0180433_100760392	3300018080	Hypersaline Lake Sediment	MTEKRVQVSEEQKKEIFELISTAGVEIKDIVKKTGIDYDTVMKILSEEYLKNNLDFGRRLCCRY
Ga0190360_11730002	3300021468	Hydrothermal Vent Microbial Mat	FKLISTPGIEIDDIAQKVKLDTETILKLLSDEYLRNNLDHGRRLCCRF
Ga0190360_12748971	3300021468	Hydrothermal Vent Microbial Mat	MNKENISEELKKEIFELIAKPGIEIEDISKKTGLDYEIIMKILSDEYLKYNLD
(restricted) Ga0233409_101331142	3300022938	Seawater	MTEEVSEDVKKEVFRLISIPGIEIDNIAKQLNLAYDKVMKILENEYLRANLDQ
Ga0209978_101077132	3300024263	Deep Subsurface	MNSDVDEETKKEIFKLISTPGIEIEDIVERVNLDYDKVMKILSDEYLRNNLDYGRRLCCR
Ga0209978_105051672	3300024263	Deep Subsurface	MNSEVSEEVKKEIFNLISTPGIEIEDIIKKVKLNYDTILNILSEEYFRCNLDHGRRLCCK
Ga0209976_100039044	3300024265	Deep Subsurface	MTEEVSEEIRNQIFKLISTPGIELEEIAEKVNLDYDKVKEILTDECLRHNLDYGRRLCCR
Ga0209976_100391062	3300024265	Deep Subsurface	MTEEVSEEIKKEIFDLISTPGVEIEEIAEKLNLDYDKVMKILSDEYLKHNLDYGRRMCCR
Ga0209976_102146593	3300024265	Deep Subsurface	MKSEISEEVEKEIFKLISTPGVEIEDIIKKLNLDYDTVMNILSEEFLKHDFNQGRRLCCR
Ga0209976_103465312	3300024265	Deep Subsurface	MTEEVSEEVKKQIFKLISTPGVQIEDIVEKVNLDYDKVMNILEDEYLRHNLDYGRRLCCR
Ga0209977_100028686	3300024432	Deep Subsurface	MPAEISEDVKKQIFKMISTPGVEISDIAKKLSLDYDKVVEILADEYLKHNLDYGRRMCCR
Ga0209977_100120502	3300024432	Deep Subsurface	MTVEVSEEVKKEIFQLIATPGIDIEEISKKINLDQDTILKILSEEYFKCNLDHGRRLCCR
Ga0209977_100497292	3300024432	Deep Subsurface	MISDVNEETKKEIFRLISTPGIEIKDIVERVNLDYDKVMKILSDEYLRNNLDYGRSLCCR
Ga0209977_100587852	3300024432	Deep Subsurface	MSDDVSEDVKKEIFRLICQPGTEIEDIAKILNLDNEKIMEILSNEYLKTNLDHGRRLCCR
Ga0209977_102892661	3300024432	Deep Subsurface	MTEEVSEEIRNQIFELISTPGIELEEIAEKVNLDYDKVKEILTDECLRHNLDYGRRLCCR
Ga0209977_104124311	3300024432	Deep Subsurface	MTEEVSEDVKKEIFRLISIPGIEIDDIVKQLNLDYDKVMKILENEYLRANLDYGRRLCCR
Ga0209986_102220251	3300024433	Deep Subsurface	MTEEISEEIKKEIFQLICQPGIEIEDIAKSVNLDFDKVMEILTNEYSRNDLDYGRRLCCR
Ga0256868_100259261	3300027811	Soil	MEGKVSEDTKKKIFQLISTPGIEIEEIAKIVNLDYDIVMDMLANEYLRTNFNYGRRLCCR
Ga0209635_100411631	3300027888	Marine Sediment	MTIEITEEIKKKICQLISTPANDIEEIAKKVNLDYDTVKEILSEEYYKCNLEYGRRLCCR
Ga0209635_101274691	3300027888	Marine Sediment	MSIEITEKVKKEIFKLISTPGVEIEEIAEKVNLDCKIVMKILEDEYFQYDLNHGRRLCCR
Ga0209635_101415713	3300027888	Marine Sediment	MNSDVNEETKKEIFRLISTPGIEIEDIVERVNLDYDKVMKILSDEYLRNNLDYGRRLCCR
Ga0209635_101520003	3300027888	Marine Sediment	MSLEVSEEVKKEIFQLIATPGIEIEDISKKTNLDQDTILKILSEEYLKCNLDHGRRLCCR
Ga0209635_104177902	3300027888	Marine Sediment	MMTSEINENIKQEIFRLICIPGTCIEEIAKKLNLDYDKVKEILSEEFLKHNLDHGRRLCCRF
Ga0209635_106498351	3300027888	Marine Sediment	MTEEVSEEIKKEIFTLISTPGVEIEDIVEKLNLDYDKVMKILENEYSRANLDQGRSLCCR
Ga0209635_106722012	3300027888	Marine Sediment	MTEEISDQIKKEIFKLISTPGIEIDEIAEKVNSAYNSNLNYDKVMNILSEEFFKHNLDYGRRLCCRF
Ga0209635_109693972	3300027888	Marine Sediment	MVEEITEDIKKEIFKLISTPGIEIQDIATKLNIEYDRVMKILSDEYLKHNLDYGRRMCCR
Ga0209636_107913191	3300027893	Marine Sediment	MSREITEEIKNEIFKLISTPGVEIEEIAEKVNLDCKIVMKILEDEYFRHNLDYGRRLCCR
Ga0209427_100171516	3300027901	Marine Sediment	MTEEVSEEIKKVIFQLISTPGVEIQDIAEKLNLDYEKVMNVLSDEYLKHNLDYGRRMCCR
Ga0209427_100172657	3300027901	Marine Sediment	MCMEFSEEVKKKICELISKPGITIEDISKEVNLDYDTIMRILSEEYFKYNLDYGRRLCCR
Ga0209427_100205607	3300027901	Marine Sediment	MSSEISEQIKEEIFKLISTPGIEIEEISKKVNLDLETVLSILSEEYFKCNLDHGRRLCCR
Ga0209427_101126272	3300027901	Marine Sediment	MTEEVSEEIKKQIFELITTPGVEIEDIVIKLNLDYDKVMDILANEYLRNNLDHGRRLCCR
Ga0209427_102226372	3300027901	Marine Sediment	MTEEVSEDIKKEIFILISTPGIEIQDIAEKLNLDYDRVMNILADEYFKHNLDYGRRMCCR
Ga0209427_106811641	3300027901	Marine Sediment	MSIEITEEVKKEIFNLISTPGVEIEEIAKKVNLDCKIVMKILEDAFERHNLDYGRRLCCR
Ga0209427_109022262	3300027901	Marine Sediment	MTEEVSEEIRNQIFELICTPGIEIEEIAEKVNLDYDKVKEILTDECLRNNLDYGRRLCCR
Ga0209536_1004608131	3300027917	Marine Sediment	MTEEVSEEIKKEIFELITIPGVEIKDIVEKLNLDYDKVMKIIENEYSRANLDQGRSLCCR
Ga0209536_1009707662	3300027917	Marine Sediment	MTEEVSEEIKKEIFELISTPGVEIEDIVEKLNLDYDKVMKIIENEYSRANLDQGRRLCCR
Ga0209536_1017524282	3300027917	Marine Sediment	MTEEVSEEIKKEIFELISMPGVEIQDIAEKLNLDYEKVMNVLSDEYLKHNLDYGRRMCCR
Ga0315554_10283162	3300031255	Salt Marsh Sediment	MNSEISEEVKKKIFDLISTPGIEIEDIIEKVNLDCDTIMKILSEEYLKHDLNHGRRLCCR
Ga0315554_12338481	3300031255	Salt Marsh Sediment	MTEEVSEDIKKEIFTLISTPGIEIQDIAEKLNLDYDRVMNILSDEY
Ga0307420_12340241	3300031281	Salt Marsh	MSSEISEEVKKKIFDLISTPGIEIEDIIEKVNLDCDTIMKILSEEYLKCDLNHGRRLCCR
Ga0307426_10720933	3300031359	Salt Marsh	MTEEVSEDIKKEIFKLISTPGIEIQDIAEKLNLDYDRVMNILADEYYKHNLDYGRRMCCR
Ga0307424_10579671	3300031511	Salt Marsh	MNSEISEEVKKKIFDLISTPGIEIEDIIEKVNLDCDTIMKILSEEYLKHDLN
Ga0315542_10235261	3300031552	Salt Marsh Sediment	MATEISKEIKSKIFKLISTPGIEIEDIVQEVNLDYDTVMDILTNEYLRSDLTQGRRLCCR
Ga0315553_100710844	3300031652	Salt Marsh Sediment	MSSEVKKKIFDLISTPGIEIEDIIEKVNLDCDTIMKILSEEYLKCDLNHGRRLCCRF
Ga0315553_101317573	3300031652	Salt Marsh Sediment	MTLEVSEEVKKEIFQLISTPGIEIEDISKKTNLDSETILNILSEEYLKCDLDHGRRLCCR
Ga0315550_11257902	3300031653	Salt Marsh Sediment	MTEEVTEEIKKEILQLISTPGIQIEDIVEKMNLDYDKVMKILSDEYLKHNLDYGRRMCCR
Ga0315293_100209396	3300031746	Sediment	MEAKVSEETKQKIFQLISTPGVEIEEIVKIVNLDYDIVMDILANEYLRTNLNYGRRLCCR
Ga0315296_106743622	3300032020	Sediment	MSSEISEQVKKEIFELISTPGIEIEDIAKKVNLDYDTVMKILSEEYLRTDLNHGRRLCCR
Ga0315546_10412491	3300032029	Salt Marsh Sediment	MSSEISEEVKKEIFDLISTPGIEIEDISEKVNLDCDTIMNILSEEYLKHDLNHGRRLCCR
Ga0315295_103747652	3300032156	Sediment	MESKVSEEIKKKIFQLISTPGVEIEEIVKIVNLEYDIVIDILANEYLRTNLNYGRRLCCR
Ga0299912_100134747	3300033489	Soil	MEGKVSEDTKKKIFQLISTPGIEIEEIAKIVNLDYDIVMDMLANEYLRTNLNYGRRLCCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters