Metagenome / Metatranscriptome Family F090719

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090719
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	132 residues
Representative Sequence	MNEPRHSGFELEKAEAVSPDPINPKIRTMEVIDTDFHFTPTWDTLRRYLKEPFKSRLFHFPLGSMEYNPEPANEKPGVGQDTHGTAATGADVIRILDQFGTDIVVLNPGYNRPQAIFNEPVIA
Number of Associated Samples	97
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.44 %
% of genes near scaffold ends (potentially truncated)	95.37 %
% of genes from short scaffolds (< 2000 bps)	92.59 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.963 % of family members)
Environment Ontology (ENVO)	Unclassified (19.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.88% β-sheet: 7.95% Coil/Unstructured: 74.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00355	Rieske	72.22
PF03401	TctC	3.70
PF07883	Cupin_2	3.70
PF13806	Rieske_2	2.78
PF01977	UbiD	0.93
PF13620	CarboxypepD_reg	0.93
PF04909	Amidohydro_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.70
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.52 %
Unclassified	root	N/A	31.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.52 %
Unclassified	root	N/A	31.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.96 %
Unclassified	root	N/A	31.48 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.33 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	3.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.56 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5.56 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	3.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.78 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	5.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	3.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.93 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	5.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	3.70 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.85 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.93 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	5.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	3.70 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.85 %
Halorubraceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae	0.93 %
Marinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium	0.93 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.93 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	5.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	3.70 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.93 %
Halopenitus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halopenitus	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.93 %
Marinobacterium jannaschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	0.93 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.48 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	3.70 %
Paenibacillus swuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus swuensis	0.93 %
Mesorhizobium sp. STM 4661	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	0.93 %
Halopenitus malekzadehii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halopenitus → Halopenitus malekzadehii	0.93 %
Paenibacillus dendritiformis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus dendritiformis	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.93 %
Marinobacterium jannaschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	0.93 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2007427000\|2007502432	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	772	Open in IMG/M
2199352024\|deeps__Contig_126265	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300000574\|JGI1357J11328_10187704	Not Available	564	Open in IMG/M
3300000890\|JGI11643J12802_11688195	Not Available	1500	Open in IMG/M
3300001661\|JGI12053J15887_10042394	All Organisms → cellular organisms → Bacteria → Proteobacteria	2553	Open in IMG/M
3300001849\|RCM26_1095225	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300004114\|Ga0062593_101992013	Not Available	645	Open in IMG/M
3300004153\|Ga0063455_100528225	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300004268\|Ga0066398_10097606	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300004643\|Ga0062591_101584151	Not Available	659	Open in IMG/M
3300004778\|Ga0062383_10657751	Not Available	534	Open in IMG/M
3300004781\|Ga0062379_10025173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300005093\|Ga0062594_100076480	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300005354\|Ga0070675_101777829	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005436\|Ga0070713_101332272	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005457\|Ga0070662_100826436	Not Available	788	Open in IMG/M
3300005467\|Ga0070706_101770197	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005526\|Ga0073909_10225246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300005552\|Ga0066701_10697316	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halopenitus → Halopenitus malekzadehii	610	Open in IMG/M
3300005561\|Ga0066699_10382135	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005561\|Ga0066699_10586954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	800	Open in IMG/M
3300005662\|Ga0078894_10217382	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300005713\|Ga0066905_100286568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1286	Open in IMG/M
3300006059\|Ga0075017_101463832	Not Available	538	Open in IMG/M
3300006175\|Ga0070712_100216288	All Organisms → cellular organisms → Bacteria → Proteobacteria	1514	Open in IMG/M
3300006176\|Ga0070765_102112227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	526	Open in IMG/M
3300006846\|Ga0075430_100308850	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300006871\|Ga0075434_100190214	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300006894\|Ga0079215_11346953	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006903\|Ga0075426_10199691	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300006904\|Ga0075424_100143567	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300009012\|Ga0066710_100302072	All Organisms → cellular organisms → Bacteria	2345	Open in IMG/M
3300009090\|Ga0099827_10561662	Not Available	983	Open in IMG/M
3300009094\|Ga0111539_10534399	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300009100\|Ga0075418_11239277	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300009551\|Ga0105238_12082260	Not Available	602	Open in IMG/M
3300009789\|Ga0126307_10677884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	832	Open in IMG/M
3300009826\|Ga0123355_10789723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1062	Open in IMG/M
3300010042\|Ga0126314_10911569	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010043\|Ga0126380_10356476	Not Available	1067	Open in IMG/M
3300010044\|Ga0126310_11044359	All Organisms → cellular organisms → Bacteria → Terrabacteria group	646	Open in IMG/M
3300010166\|Ga0126306_10427159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1039	Open in IMG/M
3300010166\|Ga0126306_11496510	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	560	Open in IMG/M
3300010360\|Ga0126372_11612808	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300010371\|Ga0134125_11747030	Not Available	677	Open in IMG/M
3300010396\|Ga0134126_11891543	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300012199\|Ga0137383_10075516	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300012200\|Ga0137382_10603732	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012202\|Ga0137363_11730288	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012212\|Ga0150985_106338047	Not Available	820	Open in IMG/M
3300012212\|Ga0150985_115989128	Not Available	857	Open in IMG/M
3300012212\|Ga0150985_116454770	Not Available	1863	Open in IMG/M
3300012359\|Ga0137385_10768415	Not Available	802	Open in IMG/M
3300012360\|Ga0137375_10347926	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012361\|Ga0137360_11017121	All Organisms → cellular organisms → Archaea	715	Open in IMG/M
3300012362\|Ga0137361_10439267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1198	Open in IMG/M
3300012469\|Ga0150984_101114841	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012469\|Ga0150984_118440382	Not Available	724	Open in IMG/M
3300012908\|Ga0157286_10304331	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012917\|Ga0137395_10137166	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300012929\|Ga0137404_11535161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	617	Open in IMG/M
3300012929\|Ga0137404_11652961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus dendritiformis	594	Open in IMG/M
3300012948\|Ga0126375_11747879	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300012951\|Ga0164300_11137058	Not Available	513	Open in IMG/M
3300012960\|Ga0164301_10106348	Not Available	1624	Open in IMG/M
3300012984\|Ga0164309_11687809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus swuensis	543	Open in IMG/M
3300012988\|Ga0164306_11557153	Not Available	568	Open in IMG/M
3300012989\|Ga0164305_10405325	Not Available	1045	Open in IMG/M
3300012989\|Ga0164305_11484848	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300014501\|Ga0182024_10049639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6681	Open in IMG/M
3300014501\|Ga0182024_12256034	Not Available	594	Open in IMG/M
3300014968\|Ga0157379_11232230	Not Available	720	Open in IMG/M
3300015371\|Ga0132258_10762923	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300017652\|Ga0182746_1082689	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300017970\|Ga0187783_10521216	Not Available	861	Open in IMG/M
3300017972\|Ga0187781_10101823	All Organisms → cellular organisms → Bacteria → Proteobacteria	1995	Open in IMG/M
3300018076\|Ga0184609_10036954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2036	Open in IMG/M
3300018085\|Ga0187772_11171451	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	565	Open in IMG/M
3300018422\|Ga0190265_13388434	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300018429\|Ga0190272_11310036	Not Available	721	Open in IMG/M
3300018465\|Ga0190269_12002228	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300018469\|Ga0190270_10133478	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300019377\|Ga0190264_10955031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	678	Open in IMG/M
3300020580\|Ga0210403_10368069	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300021363\|Ga0193699_10213526	Not Available	802	Open in IMG/M
3300021560\|Ga0126371_10948780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300025679\|Ga0207933_1107011	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	869	Open in IMG/M
3300025906\|Ga0207699_10593657	Not Available	806	Open in IMG/M
3300025933\|Ga0207706_11105739	Not Available	662	Open in IMG/M
3300025939\|Ga0207665_10859838	Not Available	718	Open in IMG/M
3300026118\|Ga0207675_102508939	Not Available	526	Open in IMG/M
3300026542\|Ga0209805_1271550	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300026557\|Ga0179587_10368846	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300027654\|Ga0209799_1023602	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300027815\|Ga0209726_10274956	Not Available	836	Open in IMG/M
3300027815\|Ga0209726_10300718	Not Available	784	Open in IMG/M
3300027815\|Ga0209726_10401234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	638	Open in IMG/M
3300027815\|Ga0209726_10413596	Not Available	625	Open in IMG/M
3300027869\|Ga0209579_10684186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300029636\|Ga0222749_10440979	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300031093\|Ga0308197_10179864	Not Available	704	Open in IMG/M
3300031562\|Ga0310886_10106341	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300031679\|Ga0318561_10549768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	636	Open in IMG/M
3300031902\|Ga0302322_103391432	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031910\|Ga0306923_11468378	Not Available	715	Open in IMG/M
3300031913\|Ga0310891_10242135	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300032261\|Ga0306920_101980117	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300033002\|Ga0346503_1122495	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.41%
Host-Associated	Host-Associated	17.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.30%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	11.11%
Arthropoda	Host-Associated → Arthropoda	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.04%
Freshwater	Environmental → Aquatic → Freshwater	9.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.63%
Sediment	Environmental → Aquatic → Sediment	1.85%
Peat	Environmental → Terrestrial → Peat	0.93%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Loam	Environmental → Terrestrial → Soil → Loam	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.41%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.41%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Contaminated	Environmental → Terrestrial → Soil → Unclassified → Contaminated	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	5.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.78%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.93%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Contaminated → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2007427000	Uranium contaminated groundwater from Oak Ridge Integrated Field Research Center, Tennessee	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017652	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033002	Soil microbial community from agricultural field in Dibrughar, Assam, India - D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2007525025	2007427000	Groundwater	MNEMRPNSFPDLEKAEAVSPDPINPKIRTMEVIDTDFHFSPKWETIRGYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDSHGTAATGADVIRILDQFGIDTVVLNPGYNRPQAI
deeps_02286870	2199352024	Soil	MNEASHGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLINEVFPVSPRIKASLMIC
JGI1357J11328_101877042	3300000574	Groundwater	MNEASHAGFEREKAEAVQPDPVNPKIRTMEVIDTDFHFTPPWATIRSYLQEPFKSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATAADVLRVMDQFGTNTVILNPGYNRPQSIFNE
JGI11643J12802_116881953	3300000890	Soil	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKILDQFGIDT
JGI12053J15887_100423941	3300001661	Forest Soil	MNEHSGFDLQKAEAVSPDPINPKIRAMEVIDTDFHFSPKWDTLRGYLKEPFKSRLFHFPLGSMDYNPEPANEKPGIGQETHGTATTAVDVLRILDQFGTDTVILNPGYNRPQAIFNEPVIAAIASAHNDYLIKE
RCM26_10952252	3300001849	Marine Plankton	MNEASHSGFESAKAIKPDPINPKVRGMDVVDTDFHFSPPWPVIRSYLKEPFKSRLWHYPAVGLEYNPEPANEKPGVGQDAHGTAGTGADVLKILDEFAIGTVILNPGYNRPMSMFNETVLAAFSSAHNDYMIKEVFPVSPRIKANMMVCQRD
Ga0062593_1019920131	3300004114	Soil	MNEASHGFEREKAEAVFPDPINPKIRTMEVIDTDFHFTPSWKTIRGYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQYGSDTVILNP
Ga0063455_1005282251	3300004153	Soil	MNEMRPTNMAELERAEAVRPDPINPKIRALEVIDTDFHFTPKWDTIRRYLKEPFKSLLHHFPLGSMEYNPEPANEKPGIGQDTHGTAATAADVLRILDQFSTDIVVLNPGYNRPRAIFNEPVIAAIASAHNDYLIEEVFPASDR
Ga0066398_100976061	3300004268	Tropical Forest Soil	MNEMRPPDRAGLEKAEAVSPDPINPKIRALEVIDTDFHFSPKWETIRRYLREPFKSRLFHFPVGSLEYNPEPANEKPGVGQDAHGTAATAADVIRVLDEFGIDTVILNPGYNRPQAIFNEPVIAAIASAHNDYLI
Ga0062591_1015841511	3300004643	Soil	MNEASHSGFEREKAEAVSPDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQYGSDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLINEV
Ga0062383_106577511	3300004778	Wetland Sediment	MNEMRPHERAELDRAEAVSPDPINPKVRTMEVIDTDFHFSPKWETLRRYLKEPFRSRLFHFPLGSMEYNPEPANEKPGIGQDAHGTAATGADVIGVLDQFGIGTVILNPGYNRPQAIFNEPVIGAIASAHNDYLIEEVFPVSDRIKANMMICHRDPQMGADEI
Ga0062379_100251733	3300004781	Wetland Sediment	MNEMRPHERAELDRAEAVSPDPINPKVRTMEVIDTDFHFSPKWETLRRYLKEPFRSRLFHFPLGSMEYNPEPANEKPGIGQDAHGTAATGADVIGVLDQFGIGTVILNPGYNRPQAIFNEPVIGAIASAHNDYLIEEVFPVSDRIKANMMICHRDPQMGADEIR
Ga0062594_1000764803	3300005093	Soil	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKIL
Ga0070675_1017778292	3300005354	Miscanthus Rhizosphere	MNEASPGGFERDRAEAVTIDPINPKIRHMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKILDQFGIDTVILNPG
Ga0070713_1013322721	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNEMRPTNPSDLERAQAIAPDPVNPKIRTMEVIDTDFHFTPKWDTLRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGIGQDTHGTASTAADVLKILDQFGTDIVVMNPGYSRPQAIFNEPVIAAIASAHNDYLIEEVFPASDRI
Ga0070662_1008264362	3300005457	Corn Rhizosphere	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKILDQFGIDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIKEVFPVSPR
Ga0070706_1017701972	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNEASPGGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADV
Ga0073909_102252461	3300005526	Surface Soil	MNEASHGFEREKAEAVFPDPINPKIRTMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGT
Ga0066701_106973161	3300005552	Soil	MNETRHAGYEKAEAVSPDPINPKVRALEVIDTDFHFTPKWDTLRGYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGSASTGADVIGVLDQFGI
Ga0066699_103821353	3300005561	Soil	MNDTRHAGYEPEKAESVSPDPINPKIRALEVIDTDFHFTPKWETLHRYLKEPFRSRLFHFPAGSLEYNPEPANEKPGVGQDTHGTAATGTDVIRILDQFGIDTVVLNPGYNRPQAIFNE
Ga0066699_105869541	3300005561	Soil	MNEPRHSGFELEKAEAVSPDPINPKIRTMEVIDTDFHFTPTWDTLRRYLKEPFKSRLFHFPLGSMEYNPEPANEKPGVGQDTHGTAATGADVIRILDQFGTDIVVLNPGYNRPQAIFNEPVIA
Ga0078894_102173821	3300005662	Freshwater Lake	MRITNERDATPERAERINPDPINPKIRTMEVIDTDFHVKPSWDTLRKYLKEPFKSLLYHYPAVASEYNPEAANGKPGVGQDAHGTASTGDDVLRVMDQFGTDLVVLNPGYNRPQSIFNEPVIAAIAAAHNDYLIEEVFPVSDRIKANIMICHRDPMMGAQEVARVGHHSQFVGVYTSFSGLYEPIGNAKFDPILDAMREYRLVLTAHSEGSFPHFSPLWKGARTW
Ga0066905_1002865683	3300005713	Tropical Forest Soil	MNEMRPAERAELEKAEAVSPDPINPKIRALEVIDTDFHFSPKWDTIRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDAHGTAATAADVIRVLDQFGIDTVILNPGYNRPQAIFNEPVIAAIASAHNDYLIEEVFPVSGRIKASLMICH
Ga0075017_1014638321	3300006059	Watersheds	MNEAVRPEDFEKAAAVKPDWVNPKLRALEIIDTDFHFTPKWETIRSYLKEPFKSRIFHYPATGLEYNPEPANEKPGVGQGAHGTASTGADVIAVLDEFAIDTVILNPGYNRPMAIFNEPVLAAISAAHNDYLIEKVFPVSPRIRANIMVCQRDPFMA
Ga0070712_1002162881	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNEMRPQDRGEIERAEAVSPDPINPKVRGLEVIDTDFHFSPKWETVRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDAHGTAATATEVLRILDQFGIDTVIVNPGYNRPQAIFNEPVIGAIASAHNDYLINEVFPVSPRIKASLM
Ga0070765_1021122271	3300006176	Soil	MNELGPAIELERAEAVSPDPINPKIRTLEVIDTDFHFSPKWETLRGYLKEPFKSRLFHFPLGSLEYNPEPANEKPGVGQDTHGTAATGADVIGVLDRFGTDIVIMNPG
Ga0075430_1003088503	3300006846	Populus Rhizosphere	MNEASHTSFEREKAEAVSPDPINPKIRQMEVIDTDFHFTPSWTTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQ
Ga0075434_1001902144	3300006871	Populus Rhizosphere	MNEASPGGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLI
Ga0079215_113469531	3300006894	Agricultural Soil	MNEASHTGFEREKAEAVSPDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRP
Ga0075426_101996911	3300006903	Populus Rhizosphere	MNEASHSGFGDRERAEAVNPDPVNPKIRTMEVIDTDFHFTPPWTTIRSYLKEPFKSRLFHYPVGSLEYNPEPANEKPGVGQDTHGTAATAVDVLRVLDQFGTDIVVLNPGYNRPQSIFNEPVIAAVAAAHND
Ga0075424_1001435674	3300006904	Populus Rhizosphere	MNEASPGGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVIMNPGYNRPQSIFNEPMIA
Ga0066710_1003020721	3300009012	Grasslands Soil	MNEPRPPQDFERAETVSPDPINPKIRTMEVIDTDFHFTPSWETVRRHLKEPFRSRLYHFPLGSMEYNPEPANEKPGIGQDTHGTAATAADVIRVLDAFGTDIVMLNPGYNRPQAIFNEPVIAAIAAAHNDYLIEE
Ga0099827_105616623	3300009090	Vadose Zone Soil	MMAMNDMRPADPAELERAQAVRPDPINPKIRTLEVIDTDFHFTPKWDTLRPYLKEPFKSLLFHFPVGSLEYNPEPANEKPGIGQDTHGTAATGADVLRVLDQFGTDIVVLNPGYNRPQAIFNEPVIAAIASAHNDYLIEQVF
Ga0111539_105343993	3300009094	Populus Rhizosphere	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKILDQFGIDTVILNPGYNRPQSIFNEPMIAAIAAAHNDY
Ga0075418_112392772	3300009100	Populus Rhizosphere	MNEASHTGFEREKAEAVTPDPVNPKIRTMEVIDTDFHFTPPWTTIRSYLQEPFKSLLFHYPVGSLEYNPEPANEKPGIGQDTHGVAATAADVLKVLDQFGTDIVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIKEVF
Ga0105238_120822602	3300009551	Corn Rhizosphere	MNEVRPGSFEKAEAVAPDPINPKIRAMEVIDTDFHFSPKWEAIRGYLKEPFKSRLFHFPLGSLEYNPEPANEKPGVGQDSHGTASTGADVVRVLDQFGIDTVILNPGYNRPQAIWNEPVIAAISAA
Ga0126307_106778841	3300009789	Serpentine Soil	MNELRPTDLSELKRAEAVSPDPINPRIRALEVIDTDFHFSLKWETLRGYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATAADVLRVLDQFGTDIVVLNPGYNRPQAIFNE
Ga0123355_107897233	3300009826	Termite Gut	MNEMRPTGTAELARAEAVAPDPVNPKIRALEVIDTDFHFTPKWEALRRYLREPFKSHLWHFPVGSLEYNPEPANENPGVGQDTHGSAATAADVLKVLDQFGIDTVIMNPGYTRPQAIFNEPVIAAIACAHNDYLIEEVFPASDRIKANLMICHRDPQM
Ga0126314_109115691	3300010042	Serpentine Soil	MNELRPTDLSELKRAEAVSPDPINPTIRALEVIDTDFHFSPKWETLRGSLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVLRVLDQFGTDIVVLNPGYNRPQAIFNEPVIAAIASAHNDYLINEVFPVSDRIKANLMICHRDPQMGADEIRRVGHHKQFIGVF
Ga0126380_103564762	3300010043	Tropical Forest Soil	MNEMRPAERAELEKAEAVSPDPINPKIRALEVIDTDFHFSPKWDTIRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDAHGTAATAADVIRVLDQFGIDTVILNPGYNRPQAIFNEPVIAAIASAHNDYLI*
Ga0126310_110443592	3300010044	Serpentine Soil	MNELRPTDLSELKRAEAVSPDPINPRIRALEVIDTDFHFSPKWETLRGSLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVLRVLDQFGTDIVVLNPGYNRPQAIFNEPVIAAIASAHNDYLVKEVFPVSDRIKANLMICHRDPQMGADEIRRV
Ga0126306_104271591	3300010166	Serpentine Soil	MNELRPTDLSELKRAEAVSPDPINPRIRALEVIDTDFHFSLKWETLRGYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGIAATGADVLRILDQFGTDIVVLNPGYNRPQAIFNE
Ga0126306_114965101	3300010166	Serpentine Soil	MNEASHSGFEREKAEAVSVDPINPKIRQVEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTV
Ga0126372_116128082	3300010360	Tropical Forest Soil	MNEMRSPDRADLEKAEAVSPDPINPKIRALEVIDTDFHFSPEWETIRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDAHGTAATAADVIRVLDEFGIDTVIVNPGYNRPQAIFNEPVIGAIASAHNDYLINEVFPVSDRIKASILICHRDPQMG
Ga0134125_117470302	3300010371	Terrestrial Soil	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKIGS*
Ga0134126_118915432	3300010396	Terrestrial Soil	MNEMSPARFEKAEAVSPDPINPKIRTMEVIDTDFHFSPKWDTIRGYLKEPFKSRLFHFPVGSLEYNPEPANEIPGVGQDSHGTAATGADVIRILDQFGTDTVILNPCYNRLQAIFNEPVIAAISAAHNDYLINEVFPVSDRIRA
Ga0137383_100755164	3300012199	Vadose Zone Soil	MNELRPTDPSELERAQAVSPDPVNPKIRTMEVIDTDFHFSPKWETLQRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDTHGTASTAAEVIAVLDQFGTDIVIMNPGYTRP
Ga0137382_106037322	3300012200	Vadose Zone Soil	MNEHSGFELQKAEAISPDPINPKIRTMEVIDTDFHFSPKWDTLRTYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVVRVLDQFGIDTVVLNPGYNRPQAIFNEPVIAAIASAHNDYLMEQVFPV
Ga0137363_117302882	3300012202	Vadose Zone Soil	MNEHSGFELQKAEAVSPDPINPKIRAMEVIDTDFHFSPKWDTLRGYLKEPFKSRLFHFPLGSMEYNPEPANERPGIGQETHGTAATAAEVLRVLDQFGTNTVI
Ga0150985_1063380471	3300012212	Avena Fatua Rhizosphere	MNEMRPPDPGDLARAEAVSPDPINPKIRALEVIDTDFHFTPKWETLRGYLKEPFKSRLYHFPLGGMEYNPEPANEKPGVGQDTHGTATTGADVLKVLDQFGTDIVILNPGYNRPQAIFNEPVIAAISAAHNDYLINEVFPVSGRIKASMMICHRDPQA
Ga0150985_1159891282	3300012212	Avena Fatua Rhizosphere	MNEIRPSDFGLGRAEAVSPDPINPKVRTMEVVDTDFHFTPKWETVRSYLKEPFRSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVLRILDQFGTNTVILNSGYNRPQ
Ga0150985_1164547704	3300012212	Avena Fatua Rhizosphere	MLVGAVCRGADKMPEDLHMNEQRHSDYELERAESVSPDPINPKIRALEVIDTDFHFSPKWDTLRQYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVLRILDQFGTDTVILNPGYNRPQAIFNEPVIAAISAAHNDYLI
Ga0137385_107684152	3300012359	Vadose Zone Soil	MNELRPTNPSELERAQAVSPDPVNPKIRTMEVIDTDFHFSPKWETLQRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDTHGTASTAAEVIAVLDQFGTDIVIMNPGYTRPQAIFNEPVIAAIASAHNDYLIEE
Ga0137375_103479263	3300012360	Vadose Zone Soil	MMNELRPQDRAELEKAEAVSPDPINPKIRALEVIDTDFHFSPKWDTVRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDAHGTAATGADVIRILDQFGIDTVVLNPGYNRPQAIFNEPVIGAIASAHND
Ga0137360_110171212	3300012361	Vadose Zone Soil	MNEHSGFDLQKAEAVSPDPINPKIRAMEVIDTDFHFSPKWDTLRGYLKEPFKSRLFHFPLGSMDYNPEPANEKPGIGQETHGTATTAVDVLRILDQFGTDTVILNPGYIRPQAIFNEPVIAAIAAA
Ga0137361_104392671	3300012362	Vadose Zone Soil	MPFGMGERRERRTTAMNEPRHSGFELEKAEAVSPDPINPKTRTMELIDTAFHVTPTWDTVRRYLKEPFKSRLFHFPLGSMEYNPEPANEKPGVGQDTHGTAATGADV
Ga0150984_1011148412	3300012469	Avena Fatua Rhizosphere	MNEMRPPDPGDLARAEAVSPDPINPKIGALEVIDTDFHFTPKWETLRGYLKEPFKSRLYHFPLGGMEYNPEPANEKPGVGQDTHGTAATGADVLKVLNQFGTDTVIL
Ga0150984_1184403822	3300012469	Avena Fatua Rhizosphere	MNELSPPNLSELKRAEAVSPDPVNPKIRTLEVIDTDFHFSPKWDTLRTYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGAAATGADVLRILDQFGTDIVVLNPGYNRPQAIFNEPVIAAIASA
Ga0157286_103043311	3300012908	Soil	MNEASHGFEREKAEAVFPDPINPKIRTMEVIDTDFHFTPSWKTIRGYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQYGTDTVILNPGY
Ga0137395_101371661	3300012917	Vadose Zone Soil	MNEHSGFDLQKAEAVSPDPINPKIRAMEVIDTDFHFSPKWDTLRGYLKEPFKSRLFHFPLGSMDYNPEPANEKPGIGQETHGTASTAADVLRILDQFGTDTVILNP
Ga0137404_115351611	3300012929	Vadose Zone Soil	MNELGPAVELERAEAVSPDPINPKIRTLKVIDTDFHFSPKWDTLRGYLKEPFKSRLFHFPLGSLEYNPEPANEKPGVGQDTHGTAATGAEVIGILDQFGTDIVIMNPGYTRPQAIFNEPVIAAIASAHNDYLIEEVFPVSDRIKASLMVCHRDPKMAADEIRQVGHHRQFVSVFTSF
Ga0137404_116529611	3300012929	Vadose Zone Soil	MNEHSGFDLQKAEAVSPDPINPKIRAMEVIDTDFHFSPKWDTLRGYLKEPFKSRLFHFPLGSMEYNPEPANEKPGIGQDTHGTAATAADVLRILDQFGTNTVILNPGYNRPQAIFNEPVIAAISAAHNDYLIREVFPVSDRIKASLMVCHRDPKMAADEIRRVGHHR
Ga0126375_117478792	3300012948	Tropical Forest Soil	MNEMRPPERTGLEKAEAVSPDPINPKIRAIEVIDTDFHFSPKWDTIRRYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDAHGTAATAADVIRVLDQFGIDTVILNPGYNRPQAIFNEPVIAAIA
Ga0164300_111370581	3300012951	Soil	MNEIRPSDFGLGRAEAVSPDPINPKVRTMEVVDTDFHFTPKWETVRSYLKEPFRSRLFHFPVGSLEYNPEPANEKPGVGQACHGTASTAADVLRVLDQFGTDTVILNPGYNRPQAIFNEPVIAA
Ga0164301_101063481	3300012960	Soil	MNEIRPSDFGLRRAEAVSPDPINPKVRTMEVVDTDFHFTPKWETVRSYLKEPFRSRLFHFPVGSLEYNPEPANEKPGVGQDCHGTASTAADVLRVLDQFGTDTVILNPGYNRPQAIFNEP
Ga0164309_116878092	3300012984	Soil	MNEIRPSDFGLRRAEAVSPDPINPKVRTMEVVDTDFHFTPKWETVRSYLKEPFRSRLFHFPVGSLEYNPEPANEKPGVGQDCHGTASTAADVLRVLD
Ga0164306_115571531	3300012988	Soil	SEDRRRSGDPHRLTAAFDGERNDVMNEASHGFEREKAEAVFPDPINPKIRTMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIQEVFPVSPRIKASLMICHRDPFMGAAEIRRV
Ga0164305_104053253	3300012989	Soil	MNEIRPSDFGLRRAEAVSPDPINPKVRTMEVVDTDFHFTPKWETVRSYLKEPFRSRLFHFPVGSLEYNPEPANEKPGVGQDCHGTASTAADVLRVLDQFGTDTVILNPGYNRPQAIFNEPVIAAIASAHNDHLINEVFPVSDRIKASLMICHRDPQAGADEIARVG
Ga0164305_114848482	3300012989	Soil	MNEASHGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIQEVF
Ga0182024_100496391	3300014501	Permafrost	MAMNELGPAIELERAEAISPDPINPRIRTLEVIDTDFHFSPKWETLRGYLQEPFKSRLYHFPLGSLEYNPEPANEKPGVGQDTHGTASTGAEVIDVLDRFGTDIVIMNPGYTRPQAIFNEPVIAA
Ga0182024_122560341	3300014501	Permafrost	MEDAMNEAFQTGNMDFEKAEPVAPDPINPKLRTMEIIDTDFHFTPPWTTIKRYLKEPFKSRIFHFPATGLEYNPEPANEKPGVGQDTHGTAATAQDVINVLDQFAVDTVVLNPGYNRPQSIFNEPVLAAISAAHNDYLIEEVFPASERIRANLMVCHRDPQMAAAEIRRVGHHRQFAGVFTEFSALYEQ
Ga0157379_112322301	3300014968	Switchgrass Rhizosphere	VKDALRFNPGYKDLVMNETRHSGFELQKAEAVSPDPINPKIRTMEVIDTDFHFTPKWDTLHGYLKEPFKSRLFHFPLGSMEYNPEPANEKPGIGQETHGTASTAADVLRILDQFGTDTVILNPGYNRPQAIFNEPVIAAISAAHNDYLIKEVF
Ga0132258_107629234	3300015371	Arabidopsis Rhizosphere	MNEASPGGFERDRAEAVTIDPINPKIRHMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKLGVGQDTHGVAQTGDDVIKILD
Ga0182746_10826891	3300017652	Compost	MNELSPIDRMRAEAVTPDPIHPKVRELDVIDTDFHFSPPWATIRSYLQEPFRELLHHYPATSLEYNPEPANEKPGVGQDTHGTAGTALEVLAVLDRMGVGTVILN
Ga0187783_105212161	3300017970	Tropical Peatland	MNESPPPDYAELERAEAVSPDPINPKIRALEVIDTDFHFTPPWETVRRHLKEPFRRLLYHAPVGSFEYNPEPANEKPGVGQDTHGTAATAADVLAVLDRFGTDTVILNPGYNRPQGLFNEPVIAAIASAHNDY
Ga0187781_101018233	3300017972	Tropical Peatland	MNESRHTGYAELERAEAIKPDPIDPRIRTMEVIDTDFHFTPPWDTIRGYLKEPFKSLLFHFPVGGLEYNPEPANEKPGVGQDTHGTAATGADVIAILDQFGTDIVVLNPGYNRPQSIFNEPVIAAIAAAHNDYLIEEVFPVSDRIKANLMICHRDPQMGADEIRRVGHHRQFVGVYSSFSSLYEPLGNAKYD
Ga0184609_100369541	3300018076	Groundwater Sediment	MNELRPHDRSELDRAEAVSPDPINPKIRTMEVIDTDFHFSATWDTLRQRLKEPFRSRLFHFPLGSMEYNPEPANEKPGVGQDAHGTAATGADVIRVLDQFGIDTVILNPGYNRPQAIFNEPVIGAIASAHNDYLIEEVFPVSDRIKANMMICHRDPQMGADEI
Ga0187772_111714511	3300018085	Tropical Peatland	MNEMRPGGYELEKAQAVVPDPINPKVRALEVIDTDFHFTPQWETLRRYLKEPFKSRLFHFPLGSMEYNPEPANEKPGIGQDTHGTAATGADVIRVLD
Ga0190265_133884342	3300018422	Soil	MNELKPSGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIK
Ga0190272_113100361	3300018429	Soil	MNEASHNVFEREKAEAVNVDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLINEVFPVSPRIKA
Ga0190269_120022282	3300018465	Soil	MNELNPSGFEREKAEAVSIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGADV
Ga0190270_101334783	3300018469	Soil	MNEASHGGFEREKAEAVSVDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAVAAAHNDYLIKEVFPV
Ga0190264_109550312	3300019377	Soil	MNEASHTGFEREKAEAVSPDPINPKIRQMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVLKILDQFGT
Ga0210403_103680693	3300020580	Soil	MNELGPAVELERAEAISPDPINPKIRTLEVIDTDFHFSPKWETLRGYLKEPFKSRLYHFPVGSLEYNPEPANEKPGIGQDTHGTASTGAEVIGVLDRFGTDIVIMNPGYTRPQAIFNEPVIAA
Ga0193699_102135261	3300021363	Soil	MNEASHGTFERENAEAVFPDPINPKIRTMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVLKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLINEVFPLSPRIKASLMIC
Ga0126371_109487803	3300021560	Tropical Forest Soil	MNEMRPTSPSDLERAEAIAPDPVNPKIRTMEVIDTDFHFTPKWDTLRGYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDTHGTASTAADVLKILDQFGT
Ga0207933_11070113	3300025679	Arctic Peat Soil	MNEALQPGDMNFAKAEPVAPDPINPKLRTMEIIDTDFHFTPPWPTIRNYLKEPFKSRIFHYPATGLEYNPEPANEKPGVGQDTHGTAATAQDVLAILDQFAVDTVIL
Ga0207699_105936573	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSELGPAVELERAEAISPDPINPKIRTLEVIDTDFHFSPKWETLRGYLKEPFKSRLYHFPVGSLEYNPEPANEKPGVGQDTHGTAATGAEVIGVLDRFGTDIVIMNPGYTRPQAIFN
Ga0207706_111057391	3300025933	Corn Rhizosphere	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKILDQFGIDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIKEVFPVSPRIKQTRRACRSSSAMRCATRSLR
Ga0207665_108598382	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNEASHSGFNERERAEAVSPDPVNPKIRTMEVIDTDFHFTPPWATIRSYLKEPFKSRLFHYPVGSLEYNPEPANEKPGVGQDTHGTAATAADVLRVLDQFGT
Ga0207675_1025089391	3300026118	Switchgrass Rhizosphere	MNEASHSGFEREKAEAVSPDPINPKIRTMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGEDVIKILDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIKEVFPVSPRIK
Ga0209805_12715501	3300026542	Soil	MNEPRHSGFELEKAEAVSPDPINPKIRTMEVIDTDFHFTPTWDTLRRYLKEPFKSRLFHFPLGSMEYNPEPANEKPGVGQDTHGTAATGADVIRILDQFGTDIVVLNPGYNRPQAIFNEPVIAAIAAAHNDYLI
Ga0179587_103688461	3300026557	Vadose Zone Soil	MNESRPPDFAAPERAEAISPDPINPKIRTMEVIDTDFHVTPKWDTLRGYLKEPFKSRLFHFPLGSLEYNPEPANEKPGVGQDTHGTASTGAEVIRVLDQFGTDIVIMNPGYTRPQAIFNEPVIAAIASAHNDYLIEEVFPVSERIKANLMICHRDPQMGAAEIR
Ga0209799_10236023	3300027654	Tropical Forest Soil	MNEMRPPDRAGLEKAEAVSPDPINPKIRALEVIDTDFHFSPKWETIRRYLREPFKSRLFHFPVGSLEYNPEPANEKPGVGQDAHGTAATAADVIRVLDEFGIDTVILNPGYNRPQAIFNEPVIAAIASAH
Ga0209726_102749561	3300027815	Groundwater	MNEASHTGFEREKAEAVNPDPVNPKIRTMEVIDTDFHFTPPWATLRSYLQEPFKSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATAADVLRVMDQFGTDTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIKEVFPVSDRIKATLMICHRDPFMGAAE
Ga0209726_103007182	3300027815	Groundwater	MNEASHAGFEREKAEAVQPDPVNPKIRTMEVIDTDFHFTPPWATIRSYLQEPFKSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATAADVLRVMDQFGTNTVILNPGYNRPQSIFNEPMIAAIAAAHNDYLIKEVFPVSDRIKATLMICHRDPFMGAA
Ga0209726_104012341	3300027815	Groundwater	MNELRPTNPSELRKAAAVSPDPINPKIRAMEVIDTDFHFSPKWETLRGYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVVRILDQFGTDIVVLNPGYNRPQAIFNEPVIGAIASAHNDYLIEEVFPVSDRIKANLMICHRDPQMGADEIRRVGHHKQFVGVFTSFSALFE
Ga0209726_104135962	3300027815	Groundwater	MNEASHTGFEREKAEAVNPDPVNPKIRTMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTFGVAATGADVLKILDQFGTDTVILNPGYNRP
Ga0209579_106841862	3300027869	Surface Soil	MNEMRPPNPSDLERAEAIAPDPVNPKIRALEVIDTDFHFTPKWDTLRRYLKEPFKSRLYHFPLGSLEYNPEPANEKPGIGQDTHGTASTAADVLKILDQFGTDIVVMNPGYSRPQAIFNEPVIA
Ga0222749_104409792	3300029636	Soil	MNELGPAIELERAEAVSPDPINPKIRTLEVIDTDFHFSPKWETLRGYLKEPFKSRLYHFPLGSLEYNPKPANERPGVGQDTHGTAATGAEVIGVLDRFGTDIVIMNPGYTRPQAIFNEPVIAAIASAHNDYLIEEVFPVSERIKA
Ga0308197_101798642	3300031093	Soil	MNELRPANLSELKRAEAVSPDPVNPKIRTLEVIDTDFHFSPKWETLRNYLKEPFKSRLFHFPVGSLEYNPEPANEKPGVGQDTHGTAATGADVLRVLDQFGTDIVVLNPGYNRPQAIFNEPVIAAIASA
Ga0310886_101063411	3300031562	Soil	MNEASPGGFERDRAEAVTIDPINPKIRQMEVIDTDFHFTPSWKIIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAQTGDDVIKILDQFGIDTVILN
Ga0318561_105497682	3300031679	Soil	MNELPPAATLERAEAIAPDPINPKIRALEVIDTDFHFTPKWETLRGYLKEPFKSRLFHFPLGSLEYNPEPANEKPGVGQDTHGTAATGADVIRVLDQFGIDTVIMN
Ga0302322_1033914322	3300031902	Fen	MNEHSGFNLQKAEAVSPDPINPKIRTMEVIDTDFHFSPKWDALRGYLKEPFRSRLFHFPLGSMEYNPEPANEKPGIGQETHGTASTAADVLRILDQFGTDTVILNPGYNRPQ
Ga0306923_114683782	3300031910	Soil	MNEMRPTNPSDLERAEAIAPDPVNPKIRTMEVIDTDFHFTPKWDTLKRYLKEPFKSRLYHFPLGSLEYNPEPANEKPGVGQDTHGTASTAADVLKIL
Ga0310891_102421351	3300031913	Soil	MNEASHGFEREKAEAVFPDPINPKIRTMEVIDTDFHFTPSWKTIRSYLKEPFQSLLFHYPVGSLEYNPEPANEKPGVGQDTHGVAATGADVIKILDQFGTDTVIINQ
Ga0306920_1019801172	3300032261	Soil	MNEMRPTNPSDLERAEAIAPDPVNPKIRTMEVIDTDFHFTPKWDTLKRYLKEPFKSRLYHFPLGSLEYNPEPANEKPGVGQDTHGTASTAADVLKILDQFGTDIVIMNPGYSRPQAIFNEPVIAAIASAHNDYLIEEVFPVSERIRANLMICHRDPQMGAAEIRRVGHHKQFAGVF
Ga0346503_11224951	3300033002	Soil	MNEIAGRTPIDRGQGTLVAPDPIHPKIRAMEVIDTDFHFTPAWKDLHQYLTEPFRSLMWHFPLGGMEYNPEPPNEKPGEGQDTHGTASSGEDVLRILDQFGEDIVILNPGFNRAQSIFNEPMISAVASAYNDFLIERV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090719

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences