Metagenome / Metatranscriptome Family F092391

Basic Information
Family ID	F092391
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	47 residues
Representative Sequence	GPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Number of Associated Samples	91
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	97.20 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Unclassified (86.916 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.449 % of family members)
Environment Ontology (ENVO)	Unclassified (35.514 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.682 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.99% β-sheet: 0.00% Coil/Unstructured: 63.01%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01649	Ribosomal_S20p	96.26
PF06574	FAD_syn	1.87
PF00133	tRNA-synt_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	96.26
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	1.87
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
All Organisms	root	All Organisms	13.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
cellular organisms	root	All Organisms → cellular organisms	13.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.15 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.15 %
Discoba	clade	All Organisms → cellular organisms → Eukaryota → Discoba	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.21 %
Euglenozoa	phylum	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2.80 %
Kinetoplastea	class	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Metakinetoplastina	subclass	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina	0.93 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.93 %
Trypanosomatida	order	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Thioalkalivibrio sulfidiphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio sulfidiphilus	0.93 %
Trypanosomatidae	family	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Phytomonas	genus	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Phytomonas	0.93 %
Thioalkalivibrio sulfidiphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio sulfidiphilus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
unclassified Phytomonas	no rank	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Phytomonas → unclassified Phytomonas	0.93 %
Thioalkalivibrio sulfidiphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio sulfidiphilus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Phytomonas sp. EM1	species	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Phytomonas → unclassified Phytomonas → Phytomonas sp. EM1	0.93 %
Thioalkalivibrio sulfidiphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio sulfidiphilus	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004101\|Ga0058896_1010075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	539	Open in IMG/M
3300004102\|Ga0058888_1442180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	504	Open in IMG/M
3300004121\|Ga0058882_1815923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	503	Open in IMG/M
3300004799\|Ga0058863_11653862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio sulfidiphilus	655	Open in IMG/M
3300005564\|Ga0070664_101565752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	624	Open in IMG/M
3300005578\|Ga0068854_101663380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	583	Open in IMG/M
3300005591\|Ga0070761_11120611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300005842\|Ga0068858_100088879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2875	Open in IMG/M
3300005842\|Ga0068858_100210644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1839	Open in IMG/M
3300005921\|Ga0070766_11123076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	543	Open in IMG/M
3300006176\|Ga0070765_101381376	Not Available	664	Open in IMG/M
3300010361\|Ga0126378_11123742	Not Available	886	Open in IMG/M
3300011120\|Ga0150983_10663509	Not Available	506	Open in IMG/M
3300011120\|Ga0150983_13571056	Not Available	536	Open in IMG/M
3300011120\|Ga0150983_13793853	Not Available	510	Open in IMG/M
3300012212\|Ga0150985_117659781	Not Available	516	Open in IMG/M
3300012929\|Ga0137404_11718756	Not Available	583	Open in IMG/M
3300016698\|Ga0181503_1163056	Not Available	524	Open in IMG/M
3300019155\|Ga0184568_104982	Not Available	509	Open in IMG/M
3300019170\|Ga0184570_113890	Not Available	535	Open in IMG/M
3300019179\|Ga0184593_115815	Not Available	517	Open in IMG/M
3300019181\|Ga0184594_101296	Not Available	518	Open in IMG/M
3300019182\|Ga0184598_119779	Not Available	554	Open in IMG/M
3300019185\|Ga0184587_121336	Not Available	525	Open in IMG/M
3300019187\|Ga0184584_130754	Not Available	502	Open in IMG/M
3300019187\|Ga0184584_144722	Not Available	531	Open in IMG/M
3300019260\|Ga0181506_1343106	Not Available	536	Open in IMG/M
3300019268\|Ga0181514_1450522	Not Available	530	Open in IMG/M
3300019270\|Ga0181512_1405606	Not Available	534	Open in IMG/M
3300020069\|Ga0197907_11449934	Not Available	509	Open in IMG/M
3300020078\|Ga0206352_11208946	Not Available	500	Open in IMG/M
3300020081\|Ga0206354_10679091	Not Available	521	Open in IMG/M
3300022502\|Ga0242646_1034981	Not Available	529	Open in IMG/M
3300022502\|Ga0242646_1036470	Not Available	522	Open in IMG/M
3300022505\|Ga0242647_1044144	Not Available	514	Open in IMG/M
3300022505\|Ga0242647_1046834	Not Available	504	Open in IMG/M
3300022508\|Ga0222728_1114864	Not Available	522	Open in IMG/M
3300022509\|Ga0242649_1066599	Not Available	533	Open in IMG/M
3300022509\|Ga0242649_1078229	Not Available	506	Open in IMG/M
3300022511\|Ga0242651_1042892	Not Available	542	Open in IMG/M
3300022511\|Ga0242651_1047144	Not Available	525	Open in IMG/M
3300022512\|Ga0242676_1051819	Not Available	514	Open in IMG/M
3300022522\|Ga0242659_1138202	Not Available	510	Open in IMG/M
3300022523\|Ga0242663_1097862	Not Available	581	Open in IMG/M
3300022523\|Ga0242663_1132095	Not Available	523	Open in IMG/M
3300022527\|Ga0242664_1151749	Not Available	512	Open in IMG/M
3300022529\|Ga0242668_1120840	Not Available	551	Open in IMG/M
3300022529\|Ga0242668_1146992	Not Available	516	Open in IMG/M
3300022530\|Ga0242658_1040908	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Phytomonas → unclassified Phytomonas → Phytomonas sp. EM1	943	Open in IMG/M
3300022530\|Ga0242658_1211469	Not Available	532	Open in IMG/M
3300022531\|Ga0242660_1245241	Not Available	509	Open in IMG/M
3300022533\|Ga0242662_10326538	Not Available	518	Open in IMG/M
3300022708\|Ga0242670_1066381	Not Available	543	Open in IMG/M
3300022708\|Ga0242670_1084657	Not Available	502	Open in IMG/M
3300022712\|Ga0242653_1115352	Not Available	504	Open in IMG/M
3300022716\|Ga0242673_1130944	Not Available	512	Open in IMG/M
3300022717\|Ga0242661_1098516	Not Available	609	Open in IMG/M
3300022718\|Ga0242675_1095768	Not Available	565	Open in IMG/M
3300022721\|Ga0242666_1194689	Not Available	515	Open in IMG/M
3300022722\|Ga0242657_1226481	Not Available	527	Open in IMG/M
3300022722\|Ga0242657_1255336	Not Available	504	Open in IMG/M
3300022724\|Ga0242665_10351852	Not Available	528	Open in IMG/M
3300022726\|Ga0242654_10381855	Not Available	537	Open in IMG/M
3300022726\|Ga0242654_10434576	Not Available	510	Open in IMG/M
3300023542\|Ga0247540_104265	Not Available	514	Open in IMG/M
3300023560\|Ga0247514_121326	Not Available	527	Open in IMG/M
3300023660\|Ga0247550_104974	Not Available	516	Open in IMG/M
3300023689\|Ga0247517_121004	Not Available	513	Open in IMG/M
3300025928\|Ga0207700_11985096	Not Available	508	Open in IMG/M
3300027066\|Ga0208236_1011843	Not Available	606	Open in IMG/M
3300027895\|Ga0209624_10115017	All Organisms → cellular organisms → Bacteria → Proteobacteria	1763	Open in IMG/M
3300029701\|Ga0222748_1122427	Not Available	526	Open in IMG/M
3300030580\|Ga0311355_11617372	Not Available	556	Open in IMG/M
3300030617\|Ga0311356_11488952	Not Available	612	Open in IMG/M
3300030622\|Ga0265391_10255147	Not Available	563	Open in IMG/M
3300030730\|Ga0307482_1311234	Not Available	509	Open in IMG/M
3300030738\|Ga0265462_12173431	Not Available	545	Open in IMG/M
3300030739\|Ga0302311_10365033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1026	Open in IMG/M
3300030741\|Ga0265459_14216692	Not Available	504	Open in IMG/M
3300030806\|Ga0265731_104235	Not Available	529	Open in IMG/M
3300030812\|Ga0265734_106260	Not Available	528	Open in IMG/M
3300030832\|Ga0265752_109251	Not Available	522	Open in IMG/M
3300030836\|Ga0265767_120297	Not Available	501	Open in IMG/M
3300030886\|Ga0265772_107360	Not Available	517	Open in IMG/M
3300030888\|Ga0265769_120705	Not Available	521	Open in IMG/M
3300030942\|Ga0247549_105558	Not Available	504	Open in IMG/M
3300030963\|Ga0265768_116252	Not Available	521	Open in IMG/M
3300030969\|Ga0075394_11929551	Not Available	500	Open in IMG/M
3300031011\|Ga0265774_106269	Not Available	531	Open in IMG/M
3300031040\|Ga0265754_1035258	Not Available	531	Open in IMG/M
3300031057\|Ga0170834_107801393	Not Available	502	Open in IMG/M
3300031122\|Ga0170822_13606979	Not Available	511	Open in IMG/M
3300031122\|Ga0170822_14143720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1247	Open in IMG/M
3300031634\|Ga0310106_116731	Not Available	500	Open in IMG/M
3300031667\|Ga0310111_141090	Not Available	517	Open in IMG/M
3300031690\|Ga0310101_128381	Not Available	508	Open in IMG/M
3300031708\|Ga0310686_110945950	Not Available	671	Open in IMG/M
3300031814\|Ga0247548_107828	Not Available	535	Open in IMG/M
3300031815\|Ga0316045_125585	Not Available	534	Open in IMG/M
3300031815\|Ga0316045_127569	Not Available	506	Open in IMG/M
3300031816\|Ga0316042_129939	Not Available	508	Open in IMG/M
3300031868\|Ga0316038_116352	Not Available	534	Open in IMG/M
3300031872\|Ga0316033_112774	Not Available	533	Open in IMG/M
3300031891\|Ga0316039_119054	Not Available	511	Open in IMG/M
3300033158\|Ga0335077_11568214	Not Available	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.39%
Host-Associated	Host-Associated	5.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.65%
Plants	Host-Associated → Plants	4.67%
Aquatic	Environmental → Aquatic	3.74%
Human	Host-Associated → Human	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.85%
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.74%
Peat	Environmental → Terrestrial → Peat	2.80%
Digestive System	Host-Associated → Human → Digestive System	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.70%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019155	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019170	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019179	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019181	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019182	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023542	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023560	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023660	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023689	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027066	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF005 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030806	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030812	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030832	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030886	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030934	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030942	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031011	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031634	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031667	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031690	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031814	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031815	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031816	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031868	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031891	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058896_10100752	3300004101	Forest Soil	VRRLRFRGPHFLVSAATGRGTKELAQAIMVFLEQQAAREALAREAPAGDTAA*
Ga0058888_14421802	3300004102	Forest Soil	FRGPHFLVSAATSRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA*
Ga0058882_18159231	3300004121	Forest Soil	FLISAATGRGTKELAQAVMAFLEEQRALEARGPEEPAGDTAA*
Ga0058863_116538621	3300004799	Host-Associated	EKLAREIVRKLRFRGPHFLVSAATGRGTRELAQAIMVFLEEQQAREAHAHEAPAGDTAA*
Ga0070664_1015657521	3300005564	Corn Rhizosphere	PHFLVSAATGRGTKELTQKIMVFLEEQQAHEAHDLESPAGDTAA*
Ga0068854_1016633803	3300005578	Corn Rhizosphere	PHFLVSAATGRGTKELAQKIMVFLEEQQAREAHDLESPAGDTAA*
Ga0070761_111206111	3300005591	Soil	VSAATGRGTKELAQAVMGFLEEQRVREAHAREAPAGDTAA*
Ga0068858_1000888794	3300005842	Switchgrass Rhizosphere	LRFRGPHFLVSAATGRGTRELSEAVMAFLEERDREARDRASSAADTADAQPAST*
Ga0068858_1002106441	3300005842	Switchgrass Rhizosphere	PHFLVSAATGRGTKELSQAVMVFLEEQQAREVRDLEAPAGDTAA*
Ga0070766_111230762	3300005921	Soil	LVSAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA*
Ga0070765_1013813761	3300006176	Soil	GRGTKELAQAVMGFLEEQRVREAHAREAPAGDTAA*
Ga0126378_111237423	3300010361	Tropical Forest Soil	FLVSAATGRGTKELAQKIMSFLEEQQAHEAHDLESPAGDTAA*
Ga0150983_106635091	3300011120	Forest Soil	PHFLISAATGRGTKELAQAIMGFLEEQRALEARGPEAPAGDTAA*
Ga0150983_135710562	3300011120	Forest Soil	WRLRFRGPHFLVSAATGRGTKELAQAVMVFLEEQQARGVHAPEEPAGDTAA*
Ga0150983_137938531	3300011120	Forest Soil	VRRLRFRGPHFLVSAATGRGTKELAQVVMVFLEEQQAREAHALEAPAGDTAA*
Ga0150985_1176597812	3300012212	Avena Fatua Rhizosphere	PHFLVSAATGRGTKELTQAIMVFLEEQQAHEAHGLESPAGDTAA*
Ga0137404_117187562	3300012929	Vadose Zone Soil	ARDIMRRLRFRGPHFLVSAATGRGTKELSQAVMVFLEEQQAREARALEAPAGDTAA*
Ga0181503_11630561	3300016698	Peatland	LRFRGPQFLISAATGRGTRELVQAVMVFLEDQRRALEAHGPEAPAGDTAA
Ga0184568_1049821	3300019155	Soil	HFLVSAATGRGTKELAQAIMGFLEEQAREARAREVPAGDTAA
Ga0184570_1138902	3300019170	Soil	RRLRFRGPNFLVSAATGRGTKELAQAVMGFLEEQRAREAHAREAPAGDTAA
Ga0184593_1158151	3300019179	Soil	RFRGPHFLVSAATGRGTKELAQAIMGFLEEQAREVLAREAPAGDTAA
Ga0184594_1012961	3300019181	Soil	RRLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQAREALAREAPAGDTAA
Ga0184598_1197792	3300019182	Soil	GQHFLISAATGRGTQELAQAVMVFLEEQRALEARGPEAPAGDTAA
Ga0184587_1213361	3300019185	Soil	VYSLRFRGQHFLISAATGRGTQELAQAVMVFLEEQRALEAHGPEAPAGDTAA
Ga0184584_1307541	3300019187	Soil	PRFLISAATGRGTKELAQAVMGFLEEQRALAARAREEPAGDTAA
Ga0184584_1447221	3300019187	Soil	VRRLRFRGQHFLISAATGRGTQELAQAVMVFLEEQRALEARGPEAPAGDTAA
Ga0181506_13431062	3300019260	Peatland	RLRFRGPQFLISAATGRGTRELVQAVMVFLEDQRRALEAHGPEAPAGDTAA
Ga0181514_14505222	3300019268	Peatland	LRFRGPHFLISAATGRGTKELAQAVMGFLEEQRALEARGPEARPGDTAA
Ga0181512_14056061	3300019270	Peatland	RRLRFRGPHFLVSAATGRGTKELAQAVMAFLEEQAREALAREAPAGDTAA
Ga0197907_114499342	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	PHFLISAATGRGTKELAQAIMVFLEEQQAREAPAHESPAGDTAA
Ga0206352_112089462	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	PHFLVSAATGRGTKELVQKIMVFLEEQQAHEAPGPESPAGDTAA
Ga0206354_106790911	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LRFRGPHFLVSAATGRGTKELAQKIMSFLEEQQAHEARDLESPAGDTAA
Ga0242646_10349811	3300022502	Soil	RRLRFRGPHFLVSAATGRGTKELAQTIMGFLEEQAREALAREAPAGDTAA
Ga0242646_10364702	3300022502	Soil	FRGPHFLISAATGRGTQELAQAVMVFLEERRALEARGPEEPAGDTAA
Ga0242647_10441441	3300022505	Soil	HFLISAATGRGTKELAQAVMGFLEERRALEARGPEERPGDTAA
Ga0242647_10468341	3300022505	Soil	VSAATGRGTKELAQAIMGFLEEQQAREAHAREAPAGDTAA
Ga0222728_11148641	3300022508	Soil	PHFLISAATGRGTQELAQAIMVFLEEQRALEARGPEEPAGDTAA
Ga0242649_10665991	3300022509	Soil	RRLRFRGPHFLVSAATGRGTKEMAQAVMVFLEEQQARGVHAPEEPAEDTAV
Ga0242649_10782292	3300022509	Soil	VSAATGRGTKELAQAVMGFLEEQRVREAHAREAPAGDTAA
Ga0242651_10428922	3300022511	Soil	RRLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREVPAGDTAA
Ga0242651_10471442	3300022511	Soil	RLRFRGPHFLISAATGRGTPELAQAVMVFLEEQQARGAHAPEEPAGDTAA
Ga0242676_10518192	3300022512	Soil	RGPHFLVSAATGRGTKELAQAIMVFLEEQAAREALAREEPAGDTAA
Ga0242659_11382021	3300022522	Soil	RLRFRGPHFLISAATGRGTKELAQAVMGFLEEQQAREAHAREEPAGDTAA
Ga0242663_10978621	3300022523	Soil	RLRFRGPHFLVSAATGRGTKELAQAIMVFLEEQAAREALAREEPAGDTVA
Ga0242663_11320952	3300022523	Soil	CYCGPHFLVSAATGRGTKELAQAVMVFLEEQAAREALAREAPAGDTAA
Ga0242664_11517491	3300022527	Soil	RRLRFRGPHFLISAATGRGTPELAQAVMVFLEEQQARGVHAPEEPAEDTAV
Ga0242668_11208402	3300022529	Soil	FLISAATSRGTKELAQAVMVFLEEQRAREARGPEEPAGDTAA
Ga0242668_11469922	3300022529	Soil	RFRGPHFLVSAATGRGTKELAQAIMVFLEEQQAREAHALVSPAGDTAA
Ga0242658_10409081	3300022530	Soil	GPHFLISAATGRGTKELAQAIMVFLEEQQAREAPAHASPAGDTAA
Ga0242658_12114691	3300022530	Soil	RLRFRGPHFLTSAATGRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA
Ga0242660_12452412	3300022531	Soil	RLRFRGPHFLVSAATGRGTKELAQEVMAFLEEQDREARALAASAGDSAA
Ga0242662_103265381	3300022533	Soil	PHFLVSAATGRGTKELAQAVMVFLEEQQARGVHAPEEPAGDTAA
Ga0242670_10663811	3300022708	Soil	ARRLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREVPAGDTAA
Ga0242670_10846571	3300022708	Soil	ISAATGRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA
Ga0242653_11153522	3300022712	Soil	LRFRGPHFLVSAATGRGTKELAQAVMGFLEEQAREVLAREAPAGDTAA
Ga0242673_11309441	3300022716	Soil	PHFLVSAATGRGTKELAQAVMVFLEEQQARGAHAPEEPAGDTAA
Ga0242661_10985161	3300022717	Soil	RLRFRGPHFLVSAATGRGTKELAQAVMTFLEEQQARGAHAPEEPAGDTAA
Ga0242675_10957682	3300022718	Soil	RLRFRGPHFLISAATSRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA
Ga0242666_11946892	3300022721	Soil	RLRFRGPHFLVSAATGRGTKELAQAVMVFLEEQAREALAREAPAGDTAA
Ga0242657_12264811	3300022722	Soil	RLRFRGPHFLVSAATGRGTKEMAQAVMVFLEEQQARGVHAPEEPAGDTAA
Ga0242657_12553361	3300022722	Soil	RGPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREVPAGDTAA
Ga0242665_103518522	3300022724	Soil	LRFRGPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAPEAPAGDTAA
Ga0242654_103818551	3300022726	Soil	RRLRFRGPHFLVSAATGRGTRELTQKIMVFLEERQAREAHDLESPAGDTAA
Ga0242654_104345761	3300022726	Soil	RLRFRGPHFLVSAETGRGTKELAQVVMVFLEEQQAREARDLEAPAGDTAA
Ga0247540_1042651	3300023542	Soil	HFLISAATGRGTKELAQAVMGFLEEQQAREAHAREVPAGDTAA
Ga0247514_1213261	3300023560	Soil	RLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQAREALAREAPAGDTAA
Ga0247550_1049741	3300023660	Soil	QHFLISAATGRGTQELAQAVMVFLEEQRALEARGPEAPAGDTAA
Ga0247517_1210042	3300023689	Soil	FRGPHFLVSAATGRGTKELAQAVMGFLEEQAREALAREAPAGDTAA
Ga0207700_119850961	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RFRGPHFLVSAATGRGTKELAQKVMVFLEERQAREAHDLESPAGDTAA
Ga0208236_10118431	3300027066	Forest Soil	PQFLVSAATGRGTKELTQAIMGFLEEQRAREAHAREEPAGDTAA
Ga0209624_101150173	3300027895	Forest Soil	ARARDIARRLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREVPAGDTAA
Ga0222748_11224271	3300029701	Soil	RRLRFRGPHFLVSAATGRGTKELAQAVMVFLEEQQARGAHAPEEPAGDTAA
Ga0311355_116173721	3300030580	Palsa	TGRGTKELAQAVMGFLEEQQAREAPAREAPAGDTAA
Ga0311356_114889521	3300030617	Palsa	LRFRGPHFLISAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0265391_102551472	3300030622	Soil	FYSFLLILVNCGPHFLVSAATGRGTKELAQAVMGFLEEQRAREALAREAPAGDTAA
Ga0307482_13112341	3300030730	Hardwood Forest Soil	FLVSAATGRGTKELAQAVMVFLEEQAAREALAREAPAGDTAA
Ga0265462_121734311	3300030738	Soil	LRSLRFRGPHFLISGATGRGTKELMQAVMVFLEERDREARAREPSAEGTADAQQAGS
Ga0302311_103650331	3300030739	Palsa	AATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0265459_142166921	3300030741	Soil	FISFNSLILISAATGRGTKELAQAVMVFLEERRALEARGPEEPAGDTAA
Ga0265731_1042351	3300030806	Soil	RRLRFRGPHFLISAATGRGTKELAQAVMGFLEEQRAREAHAREAPAGDTAA
Ga0265734_1062601	3300030812	Soil	RLRFRGPHFLISAATGRGTKELAQAVMGFLEEQRAREAHAREAPAGDTAA
Ga0265752_1092512	3300030832	Soil	GPHFLVSAATGQGTKELTQSVMAFLEEQRQAREALAREAPAGDTAA
Ga0265767_1202971	3300030836	Soil	RFRGPQFLISAATGRGTKELAQAIMVFLEERRALEARGPEEPAGDTAA
Ga0075388_115787092	3300030848	Soil	LLLVYIFGYFFIFISAATGRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA
Ga0265772_1073601	3300030886	Soil	LRFRGPQFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0265769_1207052	3300030888	Soil	RFRGPHFLISAATGRGTQELAQAVMVFLEERRALEARGPEEPAGDTAA
Ga0075391_111081142	3300030934	Soil	WRDSFPSFFVCLISAATGRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA
Ga0247549_1055581	3300030942	Soil	HFLVSAATGRGTKELAQAVMGFLEEQAREALAREAPAGDTAA
Ga0265768_1162521	3300030963	Soil	PHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREVPAGDTAA
Ga0075394_119295512	3300030969	Soil	CPFCSFFLISAASGRGTKELAQAVMVFLEEQRALEARGPEEPAGDTAA
Ga0265774_1062691	3300031011	Soil	RLRFRGPHFLISAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0265754_10352582	3300031040	Soil	LVSAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0170834_1078013932	3300031057	Forest Soil	AATGRGTKELAQAIMGFLEEQAREALAREAPAGDTAA
Ga0170822_136069792	3300031122	Forest Soil	LVSAATGRGTKELAQAIMGFLEEQAREALAREAPAGDTAA
Ga0170822_141437201	3300031122	Forest Soil	TGRGTKELAQAIMGFLEEQAREALAREEPAGDTAA
Ga0310106_1167312	3300031634	Soil	SAATGRGTKELAQAIMGFLEEQAREARAREVPAGDTAA
Ga0310111_1410902	3300031667	Soil	GPHFLVSAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0310101_1283811	3300031690	Soil	PHFLISAATGRGTKELAQAVMGFLEEQQAREAHAREAPAGDTAA
Ga0310686_1109459501	3300031708	Soil	GPHFLVSAATGRGTKELAQAVMGFLEEQAREALAREAPAGDTAA
Ga0247548_1078281	3300031814	Soil	RRLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQAAREAHAREAPAGDTAA
Ga0316045_1255852	3300031815	Soil	VRRLRFRGQHFLISAATGRGTQELAQAVMVFLEEQRALEAHGPEAPAGDTAA
Ga0316045_1275691	3300031815	Soil	HFLVSAATGHGTKELAQAVMVFLEEQAREALAREAPAGDTAA
Ga0316042_1299391	3300031816	Soil	PHFLVSAATGRGTKELAQAIMGFLEEQAREARAREVPAGDTAA
Ga0316038_1163521	3300031868	Soil	RRLRFRGPHFLVSAATGRGTKELAQAVMGFLEEQQAREALAREVPAGDTAA
Ga0316033_1127742	3300031872	Soil	RRLRFRGPHFLVSAATGRGTKELAQALMGFLEEQAREARAREVPAGDTAA
Ga0316039_1190541	3300031891	Soil	PHFLVSAATGRGTKELAQAVMGFLEEQAREALAREAPAGDTAA
Ga0335077_115682141	3300033158	Soil	LRFRGPHFLISAATGQGTRELNEAVMRFLEEGERARRVAAEEREAAAVAEPAREPG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092391

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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