Sample 3300031816

Basic Information
IMG/M Taxon OID	3300031816 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0290731 \| Ga0316042
Sample Name	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) (v2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) (v2)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	49146965
Sequencing Scaffolds	27
Novel Protein Genes	30
Associated Families	25

Dataset Contents

Total Genome Size

49146965

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	4
Not Available	18
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Amoebozoa incertae sedis → Stereomyxa → Stereomyxa ramosa	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → Viruses → Riboviria → unclassified Riboviria → Riboviria sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22

Not Available

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis

All Organisms → cellular organisms → Eukaryota → Amoebozoa → Amoebozoa incertae sedis → Stereomyxa → Stereomyxa ramosa

All Organisms → cellular organisms → Eukaryota → Opisthokonta

All Organisms → Viruses → Riboviria → unclassified Riboviria → Riboviria sp.

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Ecosystem Assignment (GOLD)

Name

Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Czech Republic: South Bohemian Region
Coordinates	Lat. (^o)	49.044	Long. (^o)	13.617	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Czech Republic: South Bohemian Region

Coordinates

Lat. (^o)

49.044

Long. (^o)

13.617

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000396	Metagenome / Metatranscriptome	1185	Y
F003812	Metagenome / Metatranscriptome	467	Y
F003861	Metagenome / Metatranscriptome	464	Y
F006591	Metagenome / Metatranscriptome	369	Y
F011079	Metagenome / Metatranscriptome	295	Y
F011999	Metagenome / Metatranscriptome	284	Y
F013050	Metagenome / Metatranscriptome	275	Y
F014579	Metagenome / Metatranscriptome	261	Y
F016913	Metagenome / Metatranscriptome	243	Y
F018933	Metagenome / Metatranscriptome	232	N
F025750	Metagenome / Metatranscriptome	200	Y
F029355	Metagenome / Metatranscriptome	188	Y
F030305	Metagenome / Metatranscriptome	185	N
F030619	Metagenome / Metatranscriptome	184	Y
F030627	Metagenome / Metatranscriptome	184	Y
F036577	Metagenome / Metatranscriptome	169	Y
F041317	Metagenome / Metatranscriptome	160	Y
F044777	Metagenome / Metatranscriptome	154	Y
F059015	Metagenome / Metatranscriptome	134	Y
F061214	Metagenome / Metatranscriptome	132	Y
F065397	Metagenome / Metatranscriptome	127	Y
F079408	Metagenome / Metatranscriptome	115	N
F092084	Metagenome / Metatranscriptome	107	N
F092391	Metagenome / Metatranscriptome	107	Y
F104140	Metagenome / Metatranscriptome	100	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0316042_103438	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	2215	Open in IMG/M
Ga0316042_103504	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	2199	Open in IMG/M
Ga0316042_103600	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	2174	Open in IMG/M
Ga0316042_103727	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	2148	Open in IMG/M
Ga0316042_115261	Not Available	928	Open in IMG/M
Ga0316042_116174	Not Available	882	Open in IMG/M
Ga0316042_116955	Not Available	847	Open in IMG/M
Ga0316042_118606	Not Available	777	Open in IMG/M
Ga0316042_119820	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	731	Open in IMG/M
Ga0316042_120238	Not Available	717	Open in IMG/M
Ga0316042_120770	Not Available	701	Open in IMG/M
Ga0316042_121865	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Amoebozoa incertae sedis → Stereomyxa → Stereomyxa ramosa	668	Open in IMG/M
Ga0316042_121969	Not Available	665	Open in IMG/M
Ga0316042_122175	All Organisms → cellular organisms → Eukaryota → Opisthokonta	660	Open in IMG/M
Ga0316042_122646	All Organisms → Viruses → Riboviria → unclassified Riboviria → Riboviria sp.	648	Open in IMG/M
Ga0316042_125138	Not Available	590	Open in IMG/M
Ga0316042_125381	Not Available	585	Open in IMG/M
Ga0316042_125461	Not Available	584	Open in IMG/M
Ga0316042_125674	Not Available	580	Open in IMG/M
Ga0316042_125730	Not Available	578	Open in IMG/M
Ga0316042_125745	Not Available	578	Open in IMG/M
Ga0316042_125925	Not Available	575	Open in IMG/M
Ga0316042_127065	Not Available	554	Open in IMG/M
Ga0316042_127342	Not Available	549	Open in IMG/M
Ga0316042_127831	Not Available	541	Open in IMG/M
Ga0316042_129939	Not Available	508	Open in IMG/M
Ga0316042_130124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0316042_103438	Ga0316042_1034381	F030619	LERNTYKRLTLLVKSLPTEQSGTPSRKGARAHRHRGGDMSPLQQVWTTCWSGLVLSGWDSLRVAWHLHSWVVKTVPSRGLAFTVKELKVLCHNVRGSALHSKRWKNVPCNIRKNVVDTLCHLAVRQPENGFTFTRLSRSLPEPPQRECVRHLQAAKLMASAEFPTSVVALDSLRSFVALTPGVSGNGVLRHPRRLPSSSSSCLEWPATRGGIDGYLEHLGHMCEEAGATQSSFHAYAGDSLGGFCLQKASVVLRPCAGVAADLRESYRCAGLLYLRSQEKPFGMKATALRTPGYKVRVVGVPDCLTFVEGSWVRSSLRWLAPGHWRIDGESRKIPGGLHYRAGRRFASLDLSKATDGLSHPAVRVVIEGLASRGLIRPADLAMSMRSLGLERGATWSFPDLGDKIGEGSFLRGSPMGTPLSFVVLSWVNAWATSTFSRALTHGDDAVGRYTPGSLELDLYASRVASVGAALNREKTFKADHAWTACEIFALPRSHGEDKMTLFYPPSIPPSTLRAPVEADQRLENLWLRRMERVMKSRFPWIVKDPRLHLPVQVGGLGYTGRGLAVGVSVRRRLGALVSRGPSAVIAADLIGKKPFREVGLYPRPLCRVVRPGSYWKAVRATEQWFQAGGDTHVPLESLLSFKSCLIEDEVRLLEGDKFKRKRVAGRPDRTRAGAVFRRLGVAPCRPLTRRWGCSALIRWASLSRESEVTVPEDIASEIRERIPDPT
Ga0316042_103504	Ga0316042_1035041	F030619	LERNTYKRLTSLVKSLPTEQSDTPSRKGVRAHRHRGGDMSPLQQVWTACWSGLVLSGWDSMRVAWFLHQWACRSAPRGVAYQVDCVKKLCHNVRGASLHSKRWKIQPCGIREDVVDCLCRLAVRSPENGFAFSRLSRSLPEPPAREAIQHLRSAAELASAPFPTSAAALESLRSFVSLSKRARRNPRAPRRLPSSSSSCLEWPATRGGIDGYLEHLGHGLEERGASQAEFTRFAGDSLGAFCLSRARVVLRPCSGVSEDMRESYRCAGLLALRAEGKPFAMKAAALRAPGYKVRVVGVPDARTFVEGSWIRESSRLLPPGHWTIDSESREIPNGLHYRRGHTFRSLDLSKATDGLSHAAIEVVVEALVRRGAIRPADHLAARRSLGLVGNTTWSFPDPIGEVVFSRGSPMGTPLSFVVLSWVSAWAAGKFSRSLTHGDDAVGRHRIGSDALDVYANRVASVGAQLNKGKTFRADHSWTACEILALPRENCEDRMTLFVPPSIPPPGLRAPTEADPRLENLWLRRMERVIKSRFPWVKCDPRLHLPVEVGGLGYTGRGLAIGRSLRSRLGALVSRGPDAVIGAALIGKKPFREVGLYPHPLVRIPKPRAYWKAAKAVDRELAPLGADLVSVPLESFEIFKCQLVESELRLSEGEKFRRKRVAGRPDRNKRSAVFRRLSVKPAKPLSRFGGLASLKRWALACKSVRVTVDQDIASEIRERIPDPSQPTRGGKGMQ
Ga0316042_103600	Ga0316042_1036001	F030619	MSPLQQVWTACWSGLVLSGWDSMRVAWFLHQWACRSAPRGVAYQVDCLKKLCHNVRGHALHSKRFKLQPCGIRKDVVDCLCNLAVRAPENGFAFSRLSRSLPEPPQRECVRHLQAAAEMASTPFPTSAAALASLRSFVSLSKRARRNPRAPRRLPSSSSSCLEWPATRGGIDGYLEHLGHGLEARGATQAEFLHLAGDSLGAFCLNRARVFLRPCQGVSEDFRESYRCAGLLALRAEGKPFAMKAAALRTPGYKVRVVGVPDARTFVEGSWIRESSRLMAPGHWAIDSESREIPNGLHYRRGHTFRSLDLSKATDGLSHAAVEVVIGALAHRGAIRPADRLMARRSLGLVGNTTWSFPDPIGEVVFSRGSPMGTPLSFVVLSWVNAWAVGRFSRSLTHGDDAVGRHRIGSDALHTYSDRVESVGAQLNRTKTFRADHSWTACEILALPRRHCEDGMSLFVPPSIPPPDLRAPVEADPRLENLWLRRMERVMKTRFPWIKCDPRLHLPVEAGGLGFTGRGLAVGRGLRSRLGALVSRGPSAEIGAALIGKKPFREVGLFPRPLVRVPKPKAYWSAVQTVDRELVPLGTDLVTVPLESFETFKCQLVESELRLVEGEKFQRKRVAGRPDRTKGSTVFRRLTVTPAKPLTRRGGVASLKRWALACKKVRVTVDQDIASEIRERIPDPSQ
Ga0316042_103727	Ga0316042_1037271	F030619	MSPLQQVWTACWSGLVLSGWDSMRVAWFLHQWACRSAPRGVAYQVDCVKKLCHNIRGASLHSKRWKVQPCGIRKDVVDCLCRLAVRSPENGFAFTRLSRSLPEPPAREATRHLQSAAMMASAPFPTSAAALVSLRSFVSLSGRARRNLRGPRRLPSSNSSCLEWPATRGGIDGYLEHLGHGLEERGATQAEFSQFAGDSLGAFCLSRARVVLRPCSGVSEDMRESYRCAGLLALRAEGKPFAMKATALRAPGYKVRVVGVPDARTFVEGSWIRESSRLLPPGHWTIDSESREIPNGLHYRRGHTFRSLDLSKATDGLSHAAVEVVIEALVRRGAIRSADHLMARRSLGLVGNTTWSFPDPIGEVVFSRGSPMGTPLSFIVLSWVSAWAVGKFSRSLTHGDDAVGRHRIGSDALDVYASRVASVGAQLNKGKTFRADHSWTACEILALPRENCEDGMTLFVPPSVPPPGLRAPVEADPRLENLWLRRMERVIKSRFPWVKCDPRLHLPVEVGGLGYTGRGLAVGRGLRSRLGALVSRGPSAEIGAALIGKKPFREVGLYPRPLVRIPKPKAYWKAVKAVNQELAPSGADLVSVPLESFESFKCQLVESELRLAEGDRFRRKRVAGRPDRDKRSAVFRRLGVKPAKPLSRFGGLASLKRWALTCRNVRVTVDQDIASEIR
Ga0316042_115261	Ga0316042_1152611	F011999	QIPATAVIVLSGGTPAAQTASITGVNVAVAFTDQQVVKFYSTGGVQRTGGATQATISYSDGPSNTLFFSTVLPSDVVVTDYIVVAGASYGSGNSILGIKAWDVNSNTGTIGGLNRNAYPGRLSTPTINLNGAALTPGIAQRAEVLLTRALGPDADSIKSGIWYGPLEQAFAQSNLMYNVQIVNAQEVKGDKTLDMSKRYFSDTFGGRKYHKSATFSANRMDLLVMENWYIGELSPLELYDFGGGNVVVPVPDIGGATGNASYLTSHMFAYNTCFNLANSAPRAGLYVQNAAVPTV
Ga0316042_116174	Ga0316042_1161741	F030305	MPLQFIGSCIVPFGFLVPVPSFLFPALSDLARRCSSGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGYPQIARLPRLSTSCLAVDERPGCPDRSIIWLYRRRRSRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVALRVSPNLPPSDICRFRSSGLPQIGFLGGSMMNPRFARTLHPRSIQLTSLQVAPKLPLPAAPRMNLQTHSGFAFLPTLRCSLNLYPLFACRRTGLLRTTINQFPIACRAGLQ
Ga0316042_116955	Ga0316042_1169552	F006591	ALATRSFPCTGPWALTPSQVGGRLLDASSRGNAEFSVSWQDRRQNCSRRLLGEAFQHGSQNPCRGAAPYKVMRPLRHGLVTAVLEVGPRELPPERWPKGTGLASYPSIDI
Ga0316042_118606	Ga0316042_1186062	F011079	LREKRRDPWLWANASSKAMADPKPVVKTRENNRRRVLTWFAGRWRNHQLKRAEKPHSKSACRKTPDGPATRPKTPLAVENGVGKPAAPEKGAPN
Ga0316042_118648	Ga0316042_1186481	F013050	MSKGKQPRTRVKVPKLLLSEIKKVFISVNKKMGLGAAIILRFRSRALVTL
Ga0316042_119820	Ga0316042_1198201	F065397	DKLTLVMAILMTKATTDMRWTEIAPPRRVFMGRWRPLEKTLRPIAEERSLSNGELMDGLRPTFPAVSGFKAEDDNERFASAEC
Ga0316042_120238	Ga0316042_1202382	F018933	PSCWSQPSLLRRSRITPRSTLDSLYRPRIAPRSVLIDRCCPPIARRSTLNAPRRSQIAPRSTLCARAGHGLLRVQHLESSPRVQIAPYSTLCVPRRSQIAPRSTLPAPYRLRIAPLSAIDAPCRSTDISVRLHFAPCAVHGLLRAQHFKLRTAHRLLCVRRLHFVQITDCSAFLTPCLVLLADCSVLNT
Ga0316042_120770	Ga0316042_1207702	F092084	MVSSCYHSDIKDKMSRPLKVKTVIIPKGQNEYGRDVVRFTADYATSDLFEQCIGCYPLVQNDLKDSFLNEESPSPPLMIDPDVMTDEEVERWMAKYVRGNTNAFVQNAGQNVPGGRN
Ga0316042_121865	Ga0316042_1218651	F003861	HMKAVVLVAVFCACLVAALSADVKLPLKPLWPDAFSATVAVRRTREPRPEFFRWFYDDVQKKDRIDGLVRFADEFYFATRFFDHPKGLEYAVFYQESTAVCFTRKINETIPKPNFSNLNYVGKALIDLVPAYHWFVEDKVRDLTFQVYDRQDNREILRIDFDNGRRERAEAWTFLELDIGSQGSEIFEVPANILAQCTPFPASTELFSAF
Ga0316042_121969	Ga0316042_1219691	F036577	MLGKPLMLSPLSIRCSGAARVDTIPLLDRTSHRPAVRRMSLPMSLESSLPQ
Ga0316042_122175	Ga0316042_1221751	F061214	RCRLVNGFAKLTNINLALKETPINGGLNYKGPKVAEYLGR
Ga0316042_122646	Ga0316042_1226461	F016913	DDIAIGMHERGLVLKSWVDHCALAGMTLKAHERRYYCDLTFLSRFFVPCGDRNVMVPLIGKALCRFNARANRNQDVSDAQYMAGKSLSYAYEFRHVPYLRDRFLQRFRSTGVSIGCIKLHDLTWFSRQGVSGTTDVLQAAVDEPLVLSEDEFLEVVMAKYDMGLYDMDFLCDKLINEDVPYVFDDERYHLFAHEVE
Ga0316042_125138	Ga0316042_1251382	F014579	MDLDSLGIKLQALFLVGEELLDIFALITLKLDHLSHLSIDDDGAIASELLLDDLEDLLLIKFLGETLNTNVYVILRLLGLSCIFVGFG
Ga0316042_125381	Ga0316042_1253811	F029355	LPVCSPATTLVVTASPLSGAPQLIHPKLDRSLVTAFPSRARVPAFADCVPGSRVLACYFAVSITGFHARSVFLLRCRNWFAPIPAASLLQTRCIFTGKLIWPFSPSPLPSGSFCSLGIKAFNGRRCRPVRLPNPPVFRSLPAACSITRLRLRIIVRDSLRFRRLAVPQ
Ga0316042_125461	Ga0316042_1254611	F059015	SRVHGTIQRPVCMRTFALQPDVRDKTTHRSPSPLFSMRQVIALSHLHHTSLSDRHPTGAGSSIRPFARSQRRFRHHCEVNVPGLHLRIHIGNLRESVRLQALSLRSVSRPNRGAVNAQNPLSAPISNTPDLSPVSAPFQVLLRKPSGSKRSTGSISGSPSYQTFDCLLLPAASSFDSATDQRSKLASFGLTYRS
Ga0316042_125674	Ga0316042_1256741	F025750	MAKADAHRSIDPSPDKTGRGEQRARVTPSPGAMFWPCMPVGERADR
Ga0316042_125730	Ga0316042_1257301	F079408	MPVRPFGSASGIGLPQLPKFPRLRPVAFTTGELIRLPSPSPLPFRNFRSLGIKAFNGRSRRPVRLPNSPDIRSLPVAFLFLVYGYGSSSAVRYVSGGLLF
Ga0316042_125745	Ga0316042_1257452	F079408	MPVRPFGSATGIGLPQSPPLPRFRPVASRTDQLIRLLSPSPLPSRSFSSLGIKAFNERHRRPVRLPIPPDFRLLPVTVLFLEEGCGSSFAVRYVFGGLLFL
Ga0316042_125925	Ga0316042_1259251	F044777	PSDPIPSLALHRHARYRAPHREALSVSPFRSPGFDFSPPGSVLSGPPQSFFSTEPVSRNGLSLARNGCSLSEASISGSTVPTCYFKTSQLKSAPGPLSAPLPTTGLPQLRAASSLQPVALLLAGSLGCFLCLHSPPGLLPPSGSKRSTDSAALRLTFRTRPISSRSPPPFYY
Ga0316042_126845	Ga0316042_1268452	F104140	MKSENKLDGASNFRAWKTRIDLILAKNKVLDIVKG
Ga0316042_127065	Ga0316042_1270651	F030627	GVGRYAVSDRFCGDLLPARARLGPLSVRHFLRIASGRRFCCGSFRRSNHPTGWHGGFPTGRPWDFAAERRKIAPTDEGWRSLPALPFPGPAPRIGLASSAVTGSIDLPWVQCTGVEGLSPRDPDASLAATLTPIAHPAFWRRLVRGGLVAGRRLPPCPRLIASHGLL
Ga0316042_127342	Ga0316042_1273422	F041317	GHVKYARPPSGPLLANQGASAQGNSPLDVNDLGKLMGGRLQYAGVYLPDGQWADASIDQSVLAPWEHAGYQVVLSVPIVPLPPAVKSYSGPPEPGNKPYQLADYPNAVAALQRGPAVS
Ga0316042_127831	Ga0316042_1278311	F000396	DPISQPNSPPACNGTELCIQDRRAPSLRLPAAFFQTQRINTLGLACQLSWLEPASRSGLSLSRNDCPFPGHHFEVKAPDLLLRHPTLHSSCPFGSRFPHAPRFAPARAGSLPKSRCLTPAWHFQPFLGSPLPVGVFRTLKDQSVQPDSWPESSPSERSRLPITPQHRVYFISSMPDHRSR
Ga0316042_129939	Ga0316042_1299391	F092391	PHFLVSAATGRGTKELAQAIMGFLEEQAREARAREVPAGDTAA
Ga0316042_130124	Ga0316042_1301241	F003812	ASREATVKLGTILKWAALAFLVWWVVTEPTNAAHLVHNIGTFLTTAAHGLSNFVTSI
Ga0316042_130544	Ga0316042_1305442	F104140	MTYSMKSENKLDGASNFRAWKTRIDLLLAKNKVLDIVKGKIMEP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031816: Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) (v2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences