Basic Information | |
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Taxon OID | 3300000730 Open in IMG/M |
Scaffold ID | fpDRAFT_1008305 Open in IMG/M |
Source Dataset Name | Illumina Fosmids (spades contigs) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Illumina |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 36252 |
Total Scaffold Genes | 33 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 24 (72.73%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Aerobic) → Activated Sludge → Activated Sludge → Activated Sludge Microbial Communities From San Jose - Santa Clara Water Pollution Control Plant, Ca |
Source Dataset Sampling Location | ||||||||
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Location Name | San Jose/Santa Clara Water Pollution Control Plant | |||||||
Coordinates | Lat. (o) | 37.434249 | Long. (o) | -121.946397 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F037589 | Metagenome | 167 | Y |
Protein ID | Family | RBS | Sequence |
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fpDRAFT_100830517 | F037589 | GAG | MITMHTHRIIPASALRPGLATIIVSLPDRTIRSCVFMVQVWPHGVVQVAFTSGDMLTLSTRTMVGKIEHAAGPRRRVFMRRVW* |
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