Scaffold DRAFT_10079890

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold DRAFT_10079890

Scaffold DRAFT_10079890

Overview

Basic Information
Taxon OID	3300002597 Open in IMG/M
Scaffold ID	DRAFT_10079890 Open in IMG/M
Source Dataset Name	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Beijing Genomics Institute (BGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1832
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (33.33%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen → Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran

Source Dataset Sampling Location
Location Name	Jandaq, Isfahan Province, Iran
Coordinates	Lat. (^o)	34.041281	Long. (^o)	54.414582	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F096242	Metagenome	105	Y

Sequences

Protein ID	Family	RBS	Sequence
DRAFT_100798901	F096242	N/A	MLLKLIKTRQYISGSHCEVWEINHETGNRLLGEVFVLNEHLPLELIYRVTVSVRGICIQGRHCGWQWECERREQAVTEYLKVVQECREEIRIEVCEPTPDLPGYPEVDYHPGDFGEEFTPIIVPLNEDFDE*

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