Scaffold FCL3draft_1000258

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold FCL3draft_1000258

Scaffold FCL3draft_1000258

Overview

Basic Information
Taxon OID	3300003279 Open in IMG/M
Scaffold ID	FCL3draft_1000258 Open in IMG/M
Source Dataset Name	Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - U3-798FC-DHS
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	93414
Total Scaffold Genes	83 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	69 (83.13%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor → Down-Flow Hanging Sponge Reactor Microbial Communities From The University Of Illinois At Urbana-Champaign, Usa

Source Dataset Sampling Location
Location Name	USA: University of Illionis
Coordinates	Lat. (^o)	40.114056	Long. (^o)	-88.226756	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F027556	Metagenome / Metatranscriptome	194	Y

Sequences

Protein ID	Family	RBS	Sequence
FCL3draft_100025861	F027556	N/A	MPTIIAHIPLQSPGRTQVKGSGRKLVHRCEDAAGHRHQQRLPLGSVRGVVYLDALCLHCGAHFVWTDDE*

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