Scaffold ProkHueca_1080668

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold ProkHueca_1080668

Scaffold ProkHueca_1080668

Overview

Basic Information
Taxon OID	3300003314 Open in IMG/M
Scaffold ID	ProkHueca_1080668 Open in IMG/M
Source Dataset Name	Hypersaline bacterial communities from Bras del Port, Santa Pola, Spain - Pena Hueca_Prokaryotes
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Lifesequencing S.L.
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	765
Total Scaffold Genes	4 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Source Dataset Sampling Location
Location Name	Pena Hueca, Alava, Spain
Coordinates	Lat. (^o)	42.65689	Long. (^o)	-2.670449	Alt. (m)		Depth (m)	.2
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F098766	Metagenome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
ProkHueca_10806683	F098766	AGGAGG	MSHPSCAICGREADGADHVKIDVERVPPEEPPETYYFHKRCFDRSQSWERGL*

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