Basic Information | |
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Taxon OID | 3300006578 Open in IMG/M |
Scaffold ID | Ga0074059_11937490 Open in IMG/M |
Source Dataset Name | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 525 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil And Rhizosphere Microbial Communities From Centre Inrs-Institut Armand-Frappier, Laval, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Laval, Canada | |||||||
Coordinates | Lat. (o) | 45.54 | Long. (o) | -73.72 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F084428 | Metagenome / Metatranscriptome | 112 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0074059_119374902 | F084428 | AGGGGG | MEFESSEKNKAPRSLVCVVHDRNGRIVHGHVFVGDGTGLFGPQGREERERETLEGARRNHGDLVSRLQVFHAPATFRFNPNVAYRVDTKARRLVELVRRKPSKKGTAGKQKK* |
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