Scaffold Ga0102686_100009

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0102686_100009

Scaffold Ga0102686_100009

Overview

Basic Information
Taxon OID	3300006978 Open in IMG/M
Scaffold ID	Ga0102686_100009 Open in IMG/M
Source Dataset Name	Non-marine hypersaline water viral communities from Mallorca, Spain, 2024 - Pool_1_virus M8
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Alicante
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	12096
Total Scaffold Genes	16 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	3 (18.75%)
Novel Protein Genes	2 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	2

Taxonomy
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Hypersaline Water → Non-Marine Hypersaline Water Viral Communities From Mallorca, Spain, Pool 1-2-3 Virus M8 Mallorca 14

Source Dataset Sampling Location
Location Name	Salinas de Campos (Mallorca)
Coordinates	Lat. (^o)	39.333	Long. (^o)	3.05	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001105	Metagenome / Metatranscriptome	776	Y
F003767	Metagenome / Metatranscriptome	469	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0102686_10000913	F001105	N/A	MSDNKLVKTLMDAATITGLAAGIGWAAKKVVKENFTSDPSSSFMNYVKFTAVMAGSVALKQYLEDQKILPTN*
Ga0102686_10000914	F003767	N/A	MASVAIMAGGAILNAAAFIGGNYLARALGGGDDAALKEKERHDKALEAYQAAYAKYSRDRTKLLDWIETNNEIKQQAKQNFTNTDYAFKLYNQAHPDKQMIPPKEPKFSDFYQPSEQQKQGELMFVGAGALALGYAAFRFL*

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