Basic Information | |
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Taxon OID | 3300008795 Open in IMG/M |
Scaffold ID | Ga0103701_100768 Open in IMG/M |
Source Dataset Name | Microbial communities from freshwater in the western basin of Lake Erie, USA - 882-2 |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Tennessee |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1069 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water → Microbial Communities From Freshwater In The Western Basin Of Lake Erie, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | western basin of Lake Erie, USA | |||||||
Coordinates | Lat. (o) | 41.76 | Long. (o) | -83.31 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F057413 | Metagenome / Metatranscriptome | 136 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0103701_1007681 | F057413 | N/A | GGGAYAYSFDVTVLLMGACFNLAGLPYSAGFIGKEFLLFQVLRDDFISIFVRGC* |
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