Basic Information | |
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Taxon OID | 3300009488 Open in IMG/M |
Scaffold ID | Ga0114925_10001301 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 12198 |
Total Scaffold Genes | 15 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 10 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | near North Sumatra | |||||||
Coordinates | Lat. (o) | 1.759 | Long. (o) | 96.774 | Alt. (m) | Depth (m) | 1855 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F089904 | Metagenome | 108 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0114925_100013019 | F089904 | N/A | MPAEISEDIKKQIFKMISTPGVEISDIAKKLSLDYDKVVEILADEYLKHNLDYGRRMCCRF* |
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