Basic Information | |
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Taxon OID | 3300010412 Open in IMG/M |
Scaffold ID | Ga0136852_10000803 Open in IMG/M |
Source Dataset Name | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Novogene Bioinformatics Technology Co., Ltd |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 33994 |
Total Scaffold Genes | 34 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 24 (70.59%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment → Mangrove Sediment Microbial Communities From Mai Po Nature Reserve Marshes In Hong Kong, China |
Source Dataset Sampling Location | ||||||||
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Location Name | Mai Po Marshes at Hong Kong | |||||||
Coordinates | Lat. (o) | 22.0 | Long. (o) | 114.0 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F034234 | Metagenome / Metatranscriptome | 175 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0136852_1000080319 | F034234 | N/A | MFAAFRAGGLRQVSRLAMKSEIIALLFPESHAAVEGARPVVTALLRDDQGLMELRNMAADTAVFRAARLAGRLNRGKPILDPHTREVIGYEIDPIAVPTG* |
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