Basic Information | |
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Taxon OID | 3300023063 Open in IMG/M |
Scaffold ID | Ga0233335_1073766 Open in IMG/M |
Source Dataset Name | Leaf litter microbial communities from Shasta-Trinity National Forest, California, United States - GEON-DECOMP-222 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 609 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Leaf Litter → Soil And Plant Litter Microbial Communities From Temperate Forests In California, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: California | |||||||
Coordinates | Lat. (o) | 40.2526 | Long. (o) | -123.026 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F044585 | Metagenome / Metatranscriptome | 154 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0233335_10737661 | F044585 | AGGA | MSAAELDHLALTALRLLPDEPERAMRLWDDAFARASEPGRDDVARSLLRLRIVRMHHQARFGDRESLGPPMLATAAEARAHGWRVESLLVDLLEVYLATLGSNPDDGLGDVEAIRAEAEAHLDPIELSWMELMAGHFSGTMLGWAQEPERAYRALNRLVASPQAPPGLVANVQMNIGH |
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