Basic Information | |
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Taxon OID | 3300029345 Open in IMG/M |
Scaffold ID | Ga0135210_1002329 Open in IMG/M |
Source Dataset Name | Marine harbor viral communities from the Indian Ocean - SCH1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Michigan State University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1370 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor → Marine Harbor Viral Communities From The Pacific And Indian Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Indian Ocean | |||||||
Coordinates | Lat. (o) | 1.26600833 | Long. (o) | 103.8333333 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F088822 | Metagenome / Metatranscriptome | 109 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0135210_10023292 | F088822 | GGA | MDTKAIISVLFAAVIGLIGWNIKTTNELQLQVQRLEIILLNDAMTK |
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