NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001263

3300001263: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY83



Overview

Basic Information
IMG/M Taxon OID3300001263 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0085351 | Gp0055728 | Ga0012584
Sample NameMacroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY83
Sequencing StatusPermanent Draft
Sequencing CenterJ. Craig Venter Institute (JCVI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size1255905782
Sequencing Scaffolds27
Novel Protein Genes30
Associated Families29

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea5
All Organisms → cellular organisms → Bacteria2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum6
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani2
All Organisms → Viruses → Predicted Viral1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1
All Organisms → cellular organisms → Eukaryota → Sar1
Not Available3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Biddulphiophycidae → Eupodiscales → Parodontellaceae → Trieres → Trieres chinensis1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMacroalgal Surface Microbial Communities
TypeHost-Associated
TaxonomyHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Surface (saline)

Location Information
LocationBotany Bay, Sydney, NSW, Australia
CoordinatesLat. (o)-33.966629Long. (o)151.166614Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000055Metagenome / Metatranscriptome3096Y
F000088Metagenome / Metatranscriptome2436Y
F000826Metagenome / Metatranscriptome873Y
F001506Metagenome / Metatranscriptome681Y
F002870Metagenome / Metatranscriptome524Y
F008361Metagenome / Metatranscriptome334Y
F018614Metagenome / Metatranscriptome234Y
F021307Metagenome / Metatranscriptome219Y
F023215Metagenome / Metatranscriptome211Y
F026010Metagenome / Metatranscriptome199Y
F028441Metagenome / Metatranscriptome191Y
F029460Metagenome / Metatranscriptome188N
F033053Metagenome / Metatranscriptome178Y
F035958Metagenome / Metatranscriptome171Y
F036727Metagenome / Metatranscriptome169Y
F039653Metagenome / Metatranscriptome163Y
F040117Metagenome / Metatranscriptome162Y
F044539Metagenome / Metatranscriptome154N
F056056Metagenome / Metatranscriptome138Y
F056632Metagenome / Metatranscriptome137Y
F057397Metagenome / Metatranscriptome136Y
F060332Metagenome / Metatranscriptome133Y
F074570Metagenome / Metatranscriptome119Y
F079715Metagenome / Metatranscriptome115Y
F082263Metagenome / Metatranscriptome113Y
F090877Metagenome / Metatranscriptome108Y
F091615Metagenome / Metatranscriptome107N
F091624Metagenome107Y
F093339Metagenome / Metatranscriptome106Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
BBAY83_10004675All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea4550Open in IMG/M
BBAY83_10005580All Organisms → cellular organisms → Bacteria4178Open in IMG/M
BBAY83_10027139All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium1900Open in IMG/M
BBAY83_10027342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1893Open in IMG/M
BBAY83_10034922All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1665Open in IMG/M
BBAY83_10038238All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani1587Open in IMG/M
BBAY83_10039411All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1562Open in IMG/M
BBAY83_10052628All Organisms → Viruses → Predicted Viral1340Open in IMG/M
BBAY83_10071497All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1132Open in IMG/M
BBAY83_10080437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1059Open in IMG/M
BBAY83_10097397All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea950Open in IMG/M
BBAY83_10100743All Organisms → cellular organisms → Bacteria932Open in IMG/M
BBAY83_10117305All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum853Open in IMG/M
BBAY83_10125638All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium820Open in IMG/M
BBAY83_10125710All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae820Open in IMG/M
BBAY83_10138955All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum774Open in IMG/M
BBAY83_10180153All Organisms → cellular organisms → Eukaryota → Sar668Open in IMG/M
BBAY83_10196176All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea635Open in IMG/M
BBAY83_10235707All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani571Open in IMG/M
BBAY83_10239646All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum565Open in IMG/M
BBAY83_10274862Not Available521Open in IMG/M
BBAY83_10275406Not Available521Open in IMG/M
BBAY83_10288078Not Available507Open in IMG/M
BBAY83_10291033All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila504Open in IMG/M
BBAY83_14690349All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1415Open in IMG/M
BBAY83_14703435All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea544Open in IMG/M
BBAY83_14728727All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Biddulphiophycidae → Eupodiscales → Parodontellaceae → Trieres → Trieres chinensis1428Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
BBAY83_10004675BBAY83_1000467510F039653MEPTLHFIYPFLFVGILDSVIKIFYQTDLKKLVAYSTVVEMH*
BBAY83_10005580BBAY83_100055802F028441MTIKQLIKLEDKAKEVWVISPTLHYDTESKDFTELVSVNLGEKTKYRYIVPASRTVAKNLKVFKKIYKVTDAEMQKIFCILPESEFNPFIQEIAIYNASKECVACAGSSTEDTNDVIKFNQAHSKDMAKAFKAIWRKYKMENP*
BBAY83_10027139BBAY83_100271393F029460LALYKSQGLGHDSDGILGLSPHKDWKKKKLHYLWSLKDNGIIDRAMVSFSITSKDMGETPYALFGGYNSS*
BBAY83_10027342BBAY83_100273422F008361MKNGRQLFYKATLIVEQAKTNKDRLDACIELKKATARLEAINYLS*
BBAY83_10034922BBAY83_100349223F056632MFFYISGIASTFFDTEKHHYGIFIGGKILRILVPFAIAIFAFLIPRLYFGQ*
BBAY83_10038238BBAY83_100382382F044539MSNRINQFYYKIVLAYVIFFRECLNEYGWGKKIESEGIRLETNPELKMDIETKQFCLVNNAEHAPEICNEFVTVYMEYKKNIFDIPKHDQIDLTINLCHWLFQCQFTCSKLTMIA*
BBAY83_10039411BBAY83_100394112F035958MQDPAVQMELFNLGIKMEQPPGKAPENLKRDDVVDLVKKSNDFAFDLFKKEYLNIMQKDPMIMPVLISAIAHDWVFKNHQWTEEQFKCALFEHKIYEDPTVAQHMQQK*
BBAY83_10052628BBAY83_100526282F060332VLPDAYFGCTHGHIPPLKLESGAVSGQVEQWSRTDIGQRVSKFQPGENKLKLSNGKEYTYKALVLATGFDHSVEAIEGLPEMRLTPEEENVYVHVLDNKLTSERNYYHGWNHTNGDMICYSPKGPYKGEGNDFYALYYESFMRQDKIHGRSAANARIQFWTPNMEIFKFPYANEVALDECHKRGIDVMFGWEMLKVHNNQYNEKIATFKNVESGEIIEKPFTHANINPPSLTQNELVEANITDHTGLIDVNPYTL*
BBAY83_10071497BBAY83_100714972F090877MGIPMFFYISGMSATFFNTERKGFGQFFYDKTLRLMLPFVLAIFIFLMPRLYYGQPYEDWTRPDKKNIENDYWEF*
BBAY83_10080437BBAY83_100804372F001506MNQVLYNNRCKCNEEILVTKKRKSNNRSEGKPFLYPNQTELTSKTFQIKYEKTLSSLAKLLLNSFQNKYLYYAIDDILYGLKLTPTERDNLIALIYSPVLSLQNNFSINFFDIWIHEIYINETKITNKFLTTEFNNYESSSYITIKFLYRTKVTLKKQELLW*
BBAY83_10086066BBAY83_100860662F033053MDEAAARAASHEVLDTHRHLTGKAREDYLNTYFKRTWAHFDVNQTGKIEVIKMPQFERFLCSDQQMYLW*LHQYEQVYLS*
BBAY83_10097397BBAY83_100973972F036727MEVCPDHILEGLRENRKWYLRAEAIDNETYKRAMTVSDYNKGKSVSDLNIKSWSFGTAANLRSDSTW*
BBAY83_10100743BBAY83_101007433F021307MNRILYNFYDSRCRCNEEFSITKKRKSNKRSEGKPLKYPELNESSLKTFQIRYDKKLSSIAKLVLNSFQNKYIYYAIDDILYSFKSDPSERDNLLAILYSPVLSLQNNFSINFFDIWIDE
BBAY83_10117305BBAY83_101173051F000088MKYTGIIAVAALVGAISAAEITQKSSFAPPALGPYASDTDMQSSECNGADDDDIMYDVFDRYVVEERNPVGAGTGFYKLPKASGPQWAADIIRRFHVMDDDKVNAYVAANFDNFWKKYDNNGTGEIYESEGETFMRALLGPNNRFRLAPGALSDMDSGSLHVQNEFSATPDLQPFKHRYELKDQDYPDGRHALQ*
BBAY83_10117900BBAY83_101179001F000055MKFYSIIAVAALFAASNVEAVEISRKKKKEDPPPTAADTPSSGYYGADEDDVFNNIFNHYAVPITNAAGVPTGQRVLYKDGAEKACAEILLVTKQVSEAKMEAYISEFFPRTWAKFDINNSGEIDVTESHTFMRSLLGRLNQFVLAPGSLTDIKVE*NQIIQLKE*L*
BBAY83_10125638BBAY83_101256381F002870AALMAAANASQTAADLVSQALVHVESGSQARVHLESALESLTTKSEAEIIDSHSQTCAVPIDEKRALTIKVSPTYVLDEINSVTLKSFRKIVGYDTFESIRRKNRNESKDTSDYYNVTVSLMVRRKPAEASAAPARDPYNPEGSPSLAATLDKGFPYDD*
BBAY83_10125710BBAY83_101257103F079715MMAAQRDHNLTEKQAKDARWPNMYGDQDPIKEVTKDMVSGADKRPIK*
BBAY83_10138955BBAY83_101389551F000826MKFLSLSVAMLVASTEAASLNRHHVKGVTFVQTLPDVRADTVTEKDIAAHEAARADAAKVKKNPQASLLQSIRSDLEEVNLECSFGVSFSQNPRNNRARALSTKIANGIKDYTNKLIQTVDKSPNDALTEQNAHNIASLIFYDVQLEENMKTLGMDEDKELSVSVNRLKSLQKLYLFEQKGGENYLS*
BBAY83_10158456BBAY83_101584561F000055MKYTKLIVLAALFAMVAEPVQTVSIERKKKKEDPPPTAADTPSSGYYGADEDDVYNNIFNHYAVPITNAAGAPTGQKVLYKAACEKACAEILLVTKQVSEAKMEAYMGEFYPRTWAKFDVNNSGEIDITEAHTFMRSLLGRLNQFVLAPGSLTDIKVE*TCIPTCLYLRS*
BBAY83_10180153BBAY83_101801532F093339MNLSNTLFNNLTNKLKLDTYLLIKERTYVEKLLNQINYLKKLKEKNHKDLSITKFKTIANLDKAIYDDLMIMYIINVSFLKANTTIHVSDTKGNLKLFYSAGSVGLTGKQKRNRRMSMIKLISLLLKKATFLGKKPVALHLNNVNFYQSFIINRLKQTIYIKVIKSFNRAPYNGCRKRKV
BBAY83_10196176BBAY83_101961762F074570MDKLLLRNISNAKFVIGGFAVAHTAYWCLISRPKLYADVFGWDGNGGRMLKIITDLTDEEIARLKYARRLAWHWNGNRTNSYARDQISDQELSDRGIEIKQEPYVEYVKRPPHDKYL*
BBAY83_10235707BBAY83_102357072F026010VTDKPSPITMKLAQKSDSENLSVLFDHNVTRGALKNLVTDKPSPITMKLAQKSDSENLSVLFDHNVTRGALKNLVTDKPSPITMKLA*
BBAY83_10239646BBAY83_102396461F057397MTTRLQTWILANTKPLQYLVNERLAVRPGIIGRFFKAMEMGKREYSQHTLLRSFKVVNYFWVQIFHIYGVARPIGTRFFTNYGNGPLNYSAIFCYFWCTLMIFARCRFNNAREDYAFNS*
BBAY83_10274862BBAY83_102748621F091615YIEYVDKIMGNLVVGSHKGPEFSDDWDIRLDDLKGNPIFSINGENSYPIYRVNYNPSAFLFNMIPMGGEGEQLEFLTQVYEKYNLERLIYDFFEKKNMDIEVFGKEKGFNEWTPFRF*
BBAY83_10275406BBAY83_102754062F018614LAEKLDIELTPELLSLGSNEEISNALIEIALGMGKTEADITSAMG*
BBAY83_10288078BBAY83_102880783F091624MTHYDICRLRAQHFATDELVEMIDKLDKATLIAEEFATFRALKDEYESRWNNQENYNRLRSDAKMGGSFNAAIIESFFKADNNNKP
BBAY83_10291033BBAY83_102910332F023215MKFSKDLLELRAKEAKLVKMKRYEEAEKVKMKADLLEEFERNKLDAEMHAI
BBAY83_14690349BBAY83_146903491F056056MQTLSAEDKIELVDDAILKNEEFKKNVAIPYFKDIYKDLVNQSDDKNKGINRITMLTYCNLPGIIGERFVSVLDLSKTEYIDLREFVHGFFKIYYSTLETKIKLSFDM*
BBAY83_14703435BBAY83_147034351F040117LKALRLRSNRNWMWFDVRYGTKFLYIFYMPQLFYVTVSYLLVPVWRRLDERYHLRFSEGEIDDMDDNEPFVTYQQRKKPMTRRKYADCVKLVYGGVEEYDFTPEQPQRYR*
BBAY83_14728727BBAY83_147287271F082263HWGPLLRKDKVSNLGLALRWEAGLAGMEALASVPDADRTAAIDEWAGTVSGMVNGESVLDAWCVERSIVSIRVAKGDGWLSMSELRDLYRWMSMDVSGLVPNASEDEAVALSKPVYIGQPVDVSESHAIVRIALGVESLVSYLDNPAKTLEEDNLTVKKLSAIGKHFDTLKKSGQ*
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