NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001270

3300001270: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY91



Overview

Basic Information
IMG/M Taxon OID3300001270 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0085351 | Gp0056029 | Ga0012395
Sample NameMacroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY91
Sequencing StatusPermanent Draft
Sequencing CenterJ. Craig Venter Institute (JCVI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size1438004797
Sequencing Scaffolds13
Novel Protein Genes15
Associated Families12

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia1
Not Available2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMacroalgal Surface Microbial Communities
TypeHost-Associated
TaxonomyHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Surface (saline)

Location Information
LocationBotany Bay, Sydney, NSW, Australia
CoordinatesLat. (o)-33.966629Long. (o)151.166614Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F016159Metagenome / Metatranscriptome249Y
F023596Metagenome209Y
F028441Metagenome / Metatranscriptome191Y
F050382Metagenome / Metatranscriptome145Y
F055778Metagenome / Metatranscriptome138Y
F059980Metagenome / Metatranscriptome133Y
F064730Metagenome128Y
F070127Metagenome / Metatranscriptome123Y
F074897Metagenome / Metatranscriptome119Y
F079616Metagenome115Y
F103280Metagenome101Y
F105201Metagenome100Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
BBAY91_10017846All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus1655Open in IMG/M
BBAY91_10018398All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium1630Open in IMG/M
BBAY91_10046736All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1037Open in IMG/M
BBAY91_10056753All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium944Open in IMG/M
BBAY91_10057254All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea940Open in IMG/M
BBAY91_10073016All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria834Open in IMG/M
BBAY91_10082237All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia787Open in IMG/M
BBAY91_10122583Not Available648Open in IMG/M
BBAY91_10154745All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales580Open in IMG/M
BBAY91_10193147Not Available522Open in IMG/M
BBAY91_16385419All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium1296Open in IMG/M
BBAY91_16398904All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium647Open in IMG/M
BBAY91_16418113All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium510Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
BBAY91_10017846BBAY91_100178462F055778MFSNVDLPEPELPTIKTNSPCLIENDTSSRALTLLSP*
BBAY91_10018398BBAY91_100183982F028441MTLKQLIKLEDKSKEVWVVSPTLHYDTENKDFSELVSVNLGEKTKYRYIVPATSTVNKNIKVYKKMYGVTEDDIEFNFLILPESEFNPFITETAIYDASTKCVACAAPALEDSNDVIKFNENTSQNMAKAFRSLWKKYKRRNP*
BBAY91_10046736BBAY91_100467361F023596VDNTSLQKLILIGAGVIALLFVKVMFDMSDSMEEMTVSIQAIAQDVSEMQRDMHSMNESMQRMERSIHGFGQAFAPGAQQFQQMKPTDMMQNVWPS
BBAY91_10056753BBAY91_100567532F028441MTLKQLIKLEDKAKEVWVISPNLHYDTENKDFTELVSVNLGEKTKYRYIVPASRTVLKNLKIFKKTYKVTDAEIQQIFCLLPESEFNPFIQEIAIYNASNECVACAGSSTEDTNDVIKFDQAHAKAMAKSFKAIWKKYKMVNP*
BBAY91_10057254BBAY91_100572541F016159HPYHTQQNPLIFSHYNYLKTLFDATGPEQVSPHYESVSRSRKGLIFLFFYISTINTVSRFGGWAHNEWIRGMIFHHEFLIAMYIGYNEIRHYTYFLGPKFSNFYNIYSDYEFQQLFNQWTDDVEEIQLAAMVPTKQQLEFKAITGEFEFVKKRALINFLTNEKISLERHFHTRVLNMLNSIKNFEDQNMQNLIKGIAEGSLKEVQ*
BBAY91_10073016BBAY91_100730162F059980MEEACSMGFSGGFEQGKPDTALPELKNVIPVKVKWVNPQNTIYRI*
BBAY91_10082237BBAY91_100822371F079616MNTTFEIGEKVVCINAKRRWYRLGGLQENEMDTVVGFNPYDGGLILDEVKSPKSGYNAFAANRFRKVDYNFAENVLREIQPKDYKVAAVKNFKLSVLN*
BBAY91_10122583BBAY91_101225832F103280MQCLMKKRVGLLIIGSICLLPLILSEIQAQQTATFPSTTTQSTAISIEALKSRRLAIESMTDIADTVKTDSLRYIDLAIKDLVLASNTDKKAAELSQLIQTAPDRMKILQAELEKPFTMPEVV
BBAY91_10149379BBAY91_101493792F070127MQELNFSITINLSLALKEDKASINIKNVDLIPAVISLPVRLNSRDSISPPKTQKKKTIHDIILQTAKKCVVDTGQNKFTGAKLFHIALLNHPGLKRNTFAAQVIAAAPNHSSHRHYPNRKDFFTYLGK
BBAY91_10154745BBAY91_101547451F105201MLFHDEELDVEELYKCFEKLDPKTLELIKLEYDTV*
BBAY91_10192078BBAY91_101920781F064730AAMLFFVVFGDNVIRWIEGSETSYWFWLFSGKAETLAVFGSLSVLALFLHWIKLGRALKATS*
BBAY91_10193147BBAY91_101931472F050382NYNIQISNEIKRQLFGFLNFCHCDLFGICDLLFEFFNC*
BBAY91_16385419BBAY91_163854192F028441TLKQLIKLEDKAKEVWVISPTLHYDIDNKDFSELVSVNLGEKTKYRYIVPATSLVNKNLKAYKKMYDVTEDEIKSNFLILPETEFNPFITETAIYDASTSCIACAAPALEDSNDVIKFNEETSQGMAKAFRSLWKKYKRTNP*
BBAY91_16398904BBAY91_163989041F074897ECRMPHGLRYHPFRISINNAGSDDAIDMQFSQFEPRTRRIAEQLAGEALVSTQVLSDELQQYVDELDRQSSHDEFVDYEVARRIATLCWKLLDVLPAEPDERQHRLTQLAINYFVLAEDAQDDNHSLAGFEDDLQVVTAVVQALGLGHMLEE*
BBAY91_16418113BBAY91_164181131F023596MTSKSLQTLIVIGAGVIALVFVKLMFDMSRSMNEMTAYISAISQDVGEMQQDMRIMNESMLRMEESIRGLGQAFSQGSEQFQQMNPAGMMQQIMPDRGQRSR*
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