Sample 3300007896

Basic Information
IMG/M Taxon OID	3300007896 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118143 \| Gp0131541 \| Ga0111484
Sample Name	Microbial communities from sediment of the River Tyne Estuary, UK ? Live_176d_3
Sequencing Status	Permanent Draft
Sequencing Center	University of Liverpool
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	195236773
Sequencing Scaffolds	82
Novel Protein Genes	93
Associated Families	63

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1
All Organisms → cellular organisms → Archaea	8
Not Available	21
All Organisms → cellular organisms → Archaea → Euryarchaeota	2
All Organisms → cellular organisms → Archaea → TACK group	3
All Organisms → cellular organisms → Bacteria	6
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10
All Organisms → Viruses → Predicted Viral	5
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella → Methanocella paludicola	1
All Organisms → Viruses	3
All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	11
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia → Bacteroidia bacterium	1
All Organisms → Viruses → unclassified viruses → Virus sp.	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp.	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Candidatus Magnetomorum → unclassified Candidatus Magnetomorum → Candidatus Magnetomorum sp. HK-1	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia profunda	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1

Ecosystem Assignment (GOLD)
Name	Anaerobic Oil Degrading Microbial Communities From River Tyne Estuarine Sediment
Type	Environmental
Taxonomy	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment → Anaerobic Oil Degrading Microbial Communities From River Tyne Estuarine Sediment

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	estuarine biome → estuary → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline)

Location Information
Location	United Kingdom
Coordinates	Lat. (^o)	54.9632021	Long. (^o)	-1.6348029	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000388	Metagenome / Metatranscriptome	1201	Y
F000713	Metagenome / Metatranscriptome	925	Y
F001611	Metagenome / Metatranscriptome	663	N
F002151	Metagenome / Metatranscriptome	589	Y
F004784	Metagenome / Metatranscriptome	423	Y
F006143	Metagenome	380	Y
F007750	Metagenome	345	Y
F008886	Metagenome / Metatranscriptome	326	Y
F009559	Metagenome	316	Y
F009657	Metagenome / Metatranscriptome	315	Y
F013592	Metagenome	270	Y
F017146	Metagenome / Metatranscriptome	242	Y
F018557	Metagenome / Metatranscriptome	234	Y
F020017	Metagenome / Metatranscriptome	226	Y
F021299	Metagenome / Metatranscriptome	219	N
F024560	Metagenome / Metatranscriptome	205	Y
F024682	Metagenome / Metatranscriptome	205	Y
F025033	Metagenome	203	N
F025653	Metagenome / Metatranscriptome	200	Y
F026198	Metagenome	198	Y
F028047	Metagenome	193	Y
F029285	Metagenome / Metatranscriptome	189	Y
F030288	Metagenome	186	Y
F030484	Metagenome / Metatranscriptome	185	Y
F030486	Metagenome / Metatranscriptome	185	Y
F031306	Metagenome	183	Y
F034114	Metagenome / Metatranscriptome	175	Y
F036103	Metagenome / Metatranscriptome	170	Y
F038920	Metagenome / Metatranscriptome	165	Y
F039389	Metagenome	164	Y
F041592	Metagenome / Metatranscriptome	159	Y
F043408	Metagenome	156	N
F043801	Metagenome / Metatranscriptome	155	Y
F044014	Metagenome	155	Y
F044219	Metagenome	155	Y
F044785	Metagenome	154	Y
F045540	Metagenome	152	Y
F048645	Metagenome	148	Y
F048676	Metagenome / Metatranscriptome	148	Y
F049307	Metagenome / Metatranscriptome	147	Y
F054439	Metagenome	140	Y
F057771	Metagenome	136	Y
F058721	Metagenome / Metatranscriptome	134	Y
F060461	Metagenome	133	Y
F064398	Metagenome / Metatranscriptome	128	Y
F064504	Metagenome	128	Y
F073724	Metagenome	120	Y
F074523	Metagenome / Metatranscriptome	119	Y
F076162	Metagenome	118	N
F077264	Metagenome / Metatranscriptome	117	Y
F078289	Metagenome / Metatranscriptome	116	N
F079616	Metagenome	115	Y
F080660	Metagenome	115	Y
F086362	Metagenome	111	Y
F088780	Metagenome	109	Y
F088833	Metagenome	109	N
F089412	Metagenome	109	Y
F089866	Metagenome	108	Y
F092297	Metagenome	107	Y
F096272	Metagenome	105	Y
F098703	Metagenome	103	Y
F101186	Metagenome	102	N
F101860	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0111484_1000020	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	41731	Open in IMG/M
Ga0111484_1000398	All Organisms → cellular organisms → Archaea	11334	Open in IMG/M
Ga0111484_1000425	Not Available	11033	Open in IMG/M
Ga0111484_1000966	All Organisms → cellular organisms → Archaea → Euryarchaeota	7411	Open in IMG/M
Ga0111484_1001202	All Organisms → cellular organisms → Archaea → TACK group	6644	Open in IMG/M
Ga0111484_1001371	All Organisms → cellular organisms → Bacteria	6230	Open in IMG/M
Ga0111484_1001399	Not Available	6178	Open in IMG/M
Ga0111484_1001460	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	6061	Open in IMG/M
Ga0111484_1002261	All Organisms → cellular organisms → Archaea → Euryarchaeota	4769	Open in IMG/M
Ga0111484_1002517	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4502	Open in IMG/M
Ga0111484_1003265	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3918	Open in IMG/M
Ga0111484_1003373	Not Available	3845	Open in IMG/M
Ga0111484_1003558	All Organisms → Viruses → Predicted Viral	3735	Open in IMG/M
Ga0111484_1004109	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella → Methanocella paludicola	3455	Open in IMG/M
Ga0111484_1004245	Not Available	3390	Open in IMG/M
Ga0111484_1004784	All Organisms → cellular organisms → Archaea → TACK group	3160	Open in IMG/M
Ga0111484_1004960	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3094	Open in IMG/M
Ga0111484_1005204	All Organisms → Viruses	3001	Open in IMG/M
Ga0111484_1005739	All Organisms → cellular organisms → Bacteria	2842	Open in IMG/M
Ga0111484_1005742	All Organisms → Viruses	2841	Open in IMG/M
Ga0111484_1005859	All Organisms → cellular organisms → Bacteria	2812	Open in IMG/M
Ga0111484_1006261	Not Available	2713	Open in IMG/M
Ga0111484_1006294	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2705	Open in IMG/M
Ga0111484_1006741	Not Available	2605	Open in IMG/M
Ga0111484_1007552	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	2441	Open in IMG/M
Ga0111484_1007771	All Organisms → cellular organisms → Archaea → TACK group	2403	Open in IMG/M
Ga0111484_1007777	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → unclassified Bacteroidia → Bacteroidia bacterium	2403	Open in IMG/M
Ga0111484_1007811	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2396	Open in IMG/M
Ga0111484_1007933	All Organisms → Viruses → Predicted Viral	2376	Open in IMG/M
Ga0111484_1007991	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	2367	Open in IMG/M
Ga0111484_1008520	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	2286	Open in IMG/M
Ga0111484_1008846	All Organisms → Viruses → unclassified viruses → Virus sp.	2241	Open in IMG/M
Ga0111484_1011284	Not Available	1954	Open in IMG/M
Ga0111484_1011559	All Organisms → Viruses	1932	Open in IMG/M
Ga0111484_1011825	Not Available	1910	Open in IMG/M
Ga0111484_1011892	Not Available	1905	Open in IMG/M
Ga0111484_1012435	All Organisms → Viruses → unclassified viruses → Virus sp.	1860	Open in IMG/M
Ga0111484_1012822	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1831	Open in IMG/M
Ga0111484_1012853	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1829	Open in IMG/M
Ga0111484_1013227	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1799	Open in IMG/M
Ga0111484_1013776	All Organisms → Viruses → Predicted Viral	1760	Open in IMG/M
Ga0111484_1014241	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1729	Open in IMG/M
Ga0111484_1014610	All Organisms → cellular organisms → Archaea	1704	Open in IMG/M
Ga0111484_1015247	Not Available	1666	Open in IMG/M
Ga0111484_1016079	All Organisms → cellular organisms → Archaea	1619	Open in IMG/M
Ga0111484_1017020	All Organisms → Viruses → Predicted Viral	1568	Open in IMG/M
Ga0111484_1017254	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1556	Open in IMG/M
Ga0111484_1017295	Not Available	1554	Open in IMG/M
Ga0111484_1019228	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1464	Open in IMG/M
Ga0111484_1021890	Not Available	1362	Open in IMG/M
Ga0111484_1023850	Not Available	1300	Open in IMG/M
Ga0111484_1024583	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1276	Open in IMG/M
Ga0111484_1026147	Not Available	1234	Open in IMG/M
Ga0111484_1026598	All Organisms → cellular organisms → Archaea	1222	Open in IMG/M
Ga0111484_1026839	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
Ga0111484_1027315	Not Available	1204	Open in IMG/M
Ga0111484_1028335	All Organisms → Viruses → Predicted Viral	1179	Open in IMG/M
Ga0111484_1033049	Not Available	1080	Open in IMG/M
Ga0111484_1033624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	1070	Open in IMG/M
Ga0111484_1033984	Not Available	1063	Open in IMG/M
Ga0111484_1035358	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1041	Open in IMG/M
Ga0111484_1038762	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
Ga0111484_1039584	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	977	Open in IMG/M
Ga0111484_1039698	Not Available	975	Open in IMG/M
Ga0111484_1041545	All Organisms → cellular organisms → Archaea	951	Open in IMG/M
Ga0111484_1041693	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp.	950	Open in IMG/M
Ga0111484_1043980	All Organisms → cellular organisms → Archaea	920	Open in IMG/M
Ga0111484_1046003	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	897	Open in IMG/M
Ga0111484_1046358	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	893	Open in IMG/M
Ga0111484_1047493	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
Ga0111484_1050308	All Organisms → cellular organisms → Archaea	852	Open in IMG/M
Ga0111484_1057927	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp.	785	Open in IMG/M
Ga0111484_1067844	Not Available	716	Open in IMG/M
Ga0111484_1070403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Candidatus Magnetomorum → unclassified Candidatus Magnetomorum → Candidatus Magnetomorum sp. HK-1	700	Open in IMG/M
Ga0111484_1076801	Not Available	665	Open in IMG/M
Ga0111484_1084064	Not Available	629	Open in IMG/M
Ga0111484_1097340	All Organisms → cellular organisms → Archaea	575	Open in IMG/M
Ga0111484_1105975	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	546	Open in IMG/M
Ga0111484_1106616	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	544	Open in IMG/M
Ga0111484_1109343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia profunda	536	Open in IMG/M
Ga0111484_1115263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	518	Open in IMG/M
Ga0111484_1120098	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0111484_1000020	Ga0111484_10000203	F079616	MENKFYIGEVVVCINAKRRWFRLGGLQENEMYTTTGFNPYDGGLILKEIKSPSSAYPAFVSNRLRKVDYRFAERLFLKLQSELYQELQLKDQLHQ*
Ga0111484_1000020	Ga0111484_10000206	F079616	MFKIGETVVCTNAKRRWYRLGGLQVNEMYTIIGFNPFDGGLILKEVKSPGSAYHAFAANRFRKVDYSFAENVLNEIKPQPQAEPQLDEQVAEYEYLLSILN*
Ga0111484_1000020	Ga0111484_10000207	F079616	MFKIGETVVCTNAKRRWYRLGGLQLNELYTVTGFNPYDGGLILKEVKSPRSAYHAFASNRFRKVDYSFAERVMADLLEQQKPKPKNHPQFKAQRIQK*
Ga0111484_1000398	Ga0111484_100039812	F060461	MNAKQFFRIEVSIGWGHLIRERKTLTKDEETVREARRTYRDGIKKAWDIYTQDNLMVKEAKKTLDSAIDEAYKLCLPEHGERMAQTEYEEATKLYFKTLYKVHRKFADTIGQIWSVFIKDMETFRSPI*
Ga0111484_1000425	Ga0111484_10004254	F026198	MEIEIAILVAGVLIMVGGIVGGGAIYAGLEKLAEAIKKQK*
Ga0111484_1000966	Ga0111484_10009666	F024682	VEDELVSKLKAEIGKSLPPMFAGMAENMLESNKAVIITWLKENKDLVKQVIES*
Ga0111484_1001202	Ga0111484_10012028	F073724	MFDAMILKREIGKECKLDVQILETLNDGLVLRLMENRVNRNSLAFITDFVNKHDLNMILDNGVYFISKQILTPSEPIYLSE*
Ga0111484_1001371	Ga0111484_10013718	F018557	ALFLWIVLDSVAFLLFDITAGIVFFVATLILIYGLLNILGCLRPCYNCIKCTHGMGRLAALYFGRRIFKDYKYNYKLPTAIFYSLYIGAFPATFALYSAVTNFTVIKAAVFVILLVFTIYSALTWRPKKRRTQPTAPEKPSANVDAQTAS*
Ga0111484_1001399	Ga0111484_10013993	F098703	MVKKAYIILNLLPEASKASIIQIEEKIKNEAKIPLCKEIEKVIIEDIESSYMNLKNHGVSNNVAKNIMDLYTE*
Ga0111484_1001460	Ga0111484_10014606	F058721	MLRAALPCADPKCKEKMRLVFQNERFIGYRCLLKPNTHNFRYDRANKRWEKIIINTKPIIGYKESPHDIKFEEELVVESI*
Ga0111484_1002261	Ga0111484_10022612	F030484	MVDKKEEAIDEAISKMGQIKKAAGEFKENVSELVKDANIESTDWRFNVESHKEGVTIDIAIKLLITKNADDLKTSK*
Ga0111484_1002517	Ga0111484_10025173	F092297	LVNIKSPVRVKDLEGKVGLAVKALLGVEGSKKELFDNDKLLVIDLKKGECIAFMDSDNCLWELSRSVKGRYALRRLEKDK*
Ga0111484_1003265	Ga0111484_10032654	F096272	MEDLKKLQCKPKISIAEINDFILQHPNWAASIIRNALGFEMYIEFCLCCENFDKCCKKLGSIKREKSLGCICNEFLNIEHSEVNRPRLKAYCNKVTVLLNI*
Ga0111484_1003373	Ga0111484_10033735	F000388	MKIIKVTKEYFETEDEKVYFFEPLEKEISVEDMQKIVDVNEKLVKELKDVD*
Ga0111484_1003558	Ga0111484_10035584	F077264	MALSKIWNLRADPTWIELVKIQANEAGRDNPGAYVRDLVRALANNPTIKKSIFDAMRGGV
Ga0111484_1004109	Ga0111484_10041095	F025653	MQKSGREVIGMSDPIKYFETKLKEMSLTELQAYKKRLDDSIQQKIMQTVPNEQIAPLILYRGILEHAIKTRINQR*
Ga0111484_1004245	Ga0111484_10042452	F043408	MKVRKEVSLTVETAQIAAQMDNFSQWVRIGLRSYGLQEDIATQAMRVVRYRKACLHLASTLIDYATQIDPDYKGNVEEIIAKALNQTTLEEFE*
Ga0111484_1004245	Ga0111484_10042456	F006143	MQEETPIEEKKTPTTKFAEWLMDRAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI*
Ga0111484_1004784	Ga0111484_10047844	F080660	MTKKKLSREDFEAYLKAMLDQDYPKVKYQSPDSWRLRASKERMAT*
Ga0111484_1004912	Ga0111484_10049122	F028047	MEPEMKGVVFRNDWHLLGLKQIDSLFNELFSHVTIQPGIEIVNRLKMLEVCSLEILEDRSRSTVYRIRQTDEVFQIFQPGGDLFRYTSEDYFQKQPSDELVKEYIKKAPVFKIEKVSEHRDVIHHLRPPKFRALFVDRTFDKLEWIDQPPEDISQIPKLMRKMGAFYASFFRK*
Ga0111484_1004960	Ga0111484_10049602	F024682	LNAEDELISKLKQKIGKTLPPMFGGMAENMLESSKDVIINWLKENKDLVKQVIEN*
Ga0111484_1005204	Ga0111484_10052047	F006143	VIIMEEELEQKKTPTTKFAEWLMARAEKKEEKETSLESLMKFNVFLSISTLVTVAGATVAEYILMAWTWL*
Ga0111484_1005739	Ga0111484_10057393	F057771	MRTRSLVFLILLFVCSSEIYSQLKLGGSQSEINFRESPGMNSTVLSTVSSSNLLVILPGEPKNGFVEVFDIETNSFGYVYEPLIQVTDTLIFQEQNFFERSGENETSDIIIELVNRTANTLFIWINKNIYSLAPYEMKNLVLNEEEIIYFSSAPGLYPVFGREILKKSNSYRWDFKL*
Ga0111484_1005742	Ga0111484_10057421	F088833	SLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0111484_1005742	Ga0111484_10057427	F013592	MRIDMPLAPGLELIEEILFDAPTLAPLRSLHPLIRIPLIAYQAADIVSEELARRTIEAGGVGAIDIFTPEIRRYEDTALVGMGGMII*
Ga0111484_1005859	Ga0111484_10058591	F045540	KFEMKKHYSADTVISDLFDEDGAEIYWILSLSYLEIIYGFEIPEELYDRTDLTLEQFAEELSKLPRIDEKSYPEFFNIKFTSIKLTKRWIDLENKADAESVRELQIINEKFEELTDRLNVVLGNVLIN*
Ga0111484_1006261	Ga0111484_10062611	F034114	AQVEKNQMPVIQVEQSIAAGAVNNNLVSGSAFEFARTRQLVSIGVMQSVTGMFCTIQAGPDIIAEEFSPAIATRFPIIPDEMYYTDVMEPGDRLVIRVRNPTAGAIIARAIVQVSPL*
Ga0111484_1006294	Ga0111484_10062943	F064398	MVLCTFLATLIFSGIGKSAPEKMSNVYYLEYGGLKIDIMAPVKAYGGDNITVSVKTEAVVSQIFIKYIKIDLCGRVDAATEIYLDQITHLTNSSLSSYEAQYDVAIPSNLSPGLTYGIISCEWEFMGSPQKIPSSGFALTYVQNIDLEQLQAEYDELNATHQSLVQNYTTIESALEGEVRSTQNLLYVFVATTVVTSITVVVLLMRKPQRVWS*
Ga0111484_1006741	Ga0111484_10067418	F044219	MANAKTKEFEIYVLTVPDATPDNDTLDLTDYVDIADNQAFEIHECDIVLDPTEAFPASDSDIVFQLADSNITDFVSHSDRSSLYVRRMTFDSATLGMFMQESFSSITPLIVSKTLWLRNVVYTGVGGNYTLRIKGRIVTPSAKDYMALVLTQTGNVA*
Ga0111484_1007552	Ga0111484_10075522	F101860	MNDDVEKTLADPKHPIWKIMLGLVAVLSALWMNGTV*
Ga0111484_1007771	Ga0111484_10077711	F030484	MVDKKEEVIDEAISKMSQIKKAAGEFRENVAGLVKDVNIESTDWRFNVESHKEGVTIDIAIKLLITKNEEDLETSK*
Ga0111484_1007777	Ga0111484_10077773	F030486	VKLGLNITARRYVQLAQLRGGTRFCTRGAMKDYAVSSLLSRWQKP*
Ga0111484_1007811	Ga0111484_10078112	F031306	MTDFKCPICGGATEKIWENETKTRYGMRCREGHKNTGNKSNGSQEYAVFLVKSKDLV*
Ga0111484_1007933	Ga0111484_10079334	F044014	MSEDYKPRFSFEITEDQKKRADHLLDQYGLRKAIFGKILDDVLDLVEDYGGVAIGVIMSGKLKPRDVIPSMQKAQEVGEK*
Ga0111484_1007991	Ga0111484_10079912	F002151	MEYVNYIALGCSIAAFLLSVIACARVGKFVRATEDTDWETLANLTGDIAALKRTCQTLNNRLNGMNKATIPQEQIIQQMLQHQNVEPISRGG*
Ga0111484_1007991	Ga0111484_10079915	F024560	MNYYGGFGEGQTSNSRGTIGGGIDPSNQSFLGNLGQTIGGFGRDVGGFFQDIQPFTNLFGGGKSLPRTNSGTATTIINQRPDESASSGEILGANLGMGGLLLQAGRQLTRSPAGQTALGFGAGALGAALSGGGDGKVRITRRMKSDVRKIYMMAGMDPNATAQILNNLGTYPRMNFDASLVFFILTKRFRNDGAVVTKAAVRKTKTTLRRMKGVVDMYNSVCKPTTRRAPARRAAPKAVQLIKN*
Ga0111484_1008520	Ga0111484_10085202	F007750	MAFLGDFGKFFGLGSSEEVLGDVGEFVAGKPGRFVGEAAARATDNLAGDGGVSPVSTADQALEQSAVSVSRRGDVPQELSTMTGTRGMTTQAGFGALAPLFGTASRFLGSKSGQIVTGVGTAVGLGSTQFMGSDSRMKPVLTQSRRNKSKVRQLVNFMGIEGTANFLSQSMNVNVSPNDVVALLLRTFRNDGAYITKAQVRNLRRTTNRFKSLEKQVKEATSMSRTTRRAPVRRASSTTLIKN*
Ga0111484_1008520	Ga0111484_10085203	F001611	MPLVQKTLTLAAGATSDNILANTNYEFVDGNVRLRVASAVDTAGTTATADTFLNVSVNNAEYSKDVSVPALVTGQPFGVLNGSYTNNDLLTTGSQRNRVLVRFTNDTSGTRTIRCGIFIGG*
Ga0111484_1008520	Ga0111484_10085205	F009559	MNQVLLYVGLILASVSFFLCVYACLRVGKLLNSVKGLEWDTVATLTGDIGTIKKSIQTLNNRI
Ga0111484_1008846	Ga0111484_10088462	F000713	MPLVKKNITLAAGATSDQILVGTPYEYVSQNTQLVVAAAESTGTYSGNLVMNFSINNTDFSRDVAVSEKVTGEAFGWRGGYVLNDTVTTGQVRNRPVVTFTNNDAGSVDLEVAIFIGG*
Ga0111484_1011284	Ga0111484_10112843	F049307	MLTPDEYMSLMRLITSEKESEGSSLAVRDQDPTPPVRKRSRSARRADKVLSKAFKMANQRYRKKDGSLRAGRTQADIARLAHKLRKKM*
Ga0111484_1011381	Ga0111484_10113812	F028047	MESDMKEVIFRNDWHQLREKQIVDLFNEHFTGVKILPGESIIKRLKMMEVCTLEILEDRSSSTVYRIRQTDEVFHVFQPDGKLFSYTTEDYYLQKPIDELVKEYSKKDPIFKIEKVSDFKEIVHHLKSPKFLALFVDGFYQRQAIL*
Ga0111484_1011559	Ga0111484_10115593	F025033	MNRRIKRNRAVPIHITLAPSLLDEIDARLSHKMSRSNWIRGACEMKLDKDVTEVNDLTDKQLVNILRNRYNYDGPAEAILKSLLEVLSE*
Ga0111484_1011825	Ga0111484_10118251	F029285	MKNKANYSLYKCPYSHLEKECGHELHGPEGYEDVYSVWCACGFRGPVFYLEPDELKLERCNNETNKKNSIGIKANN*
Ga0111484_1011892	Ga0111484_10118924	F025033	MNHKKKRNRAIPIHITMPQTLLDDIDDQMSHKSSRSKWIRGACDLKLGKDVTEVADLTDIQLVNVLRNRFNYEGPQESILKSLLEILSKQP*
Ga0111484_1012435	Ga0111484_10124355	F017146	ITRKMKSQYRAVLNLAQGDYDQAAAMIGVSTDMFIMVLLKRFRNDGPVVTKAALRKTKTTVRRLKSMCDMYDSLRPTATRRKAPMRRASTTLISNK*
Ga0111484_1012822	Ga0111484_10128223	F080660	MPEKKRSREDFEAYLKAMLDQDYPKVKYQSPDAWHQRAFRKNKTQ*
Ga0111484_1012853	Ga0111484_10128533	F025033	MNRRIKRNRAVPIHITLAPGLLDEIDARLSHKMSRSNWIRGACEMKLEKDVTEVSDLTSKQLVNILRNRVDYDGPAEAILKSLLEVLSE*
Ga0111484_1013227	Ga0111484_10132272	F043801	MAEKFTGLCPCGFSFTTPAGEDDAVAVMKYHAELQHKKDYPNGATTAEAMKYIKKVK*
Ga0111484_1013776	Ga0111484_10137763	F025033	MNRRIKRNRAVPIHITLAPVLLDEIDARLSHKMSRSNWIRGACEMKLDKDVTEVNELTDKQLVNILRNRHNYDGPAEAILKSLLEVLSE*
Ga0111484_1014241	Ga0111484_10142412	F025033	MNRRIKRNRSVPIHITLPPALLDDIDAQLSHKMSRSNWIRGACDLKLGKDVTEVADLTDIQLVNVLRNRFNYEGPGEAILKSLLEILSKQS*
Ga0111484_1014610	Ga0111484_10146102	F025653	MSDPIKYFETQLKAMSLAELQAYKKRLEENIQQMIAKTAPNEKIAPLILYRGILEHEIKKRTK*
Ga0111484_1015247	Ga0111484_10152471	F089412	GVGFSRTAMESYTGDVDYIALIATNNFFVSVQGLNNLVAKASTGRVWGYRARADASTYAALVQSEVLSA*
Ga0111484_1016079	Ga0111484_10160792	F098703	MAKKVHIIIDLLPEASAASASQIEEKIRTEAKIPLCKNIEEVSIEDADDSYTKLKKQGISSNVARNLVDLYSE*
Ga0111484_1017020	Ga0111484_10170203	F044014	MTDDYKPRFSFEITEAQKERADKLITTYGLRKAIFCVVLDDVLDLIESYGGIAVGILMAGQVKPREILPTLSKVGEVGNGSK*
Ga0111484_1017254	Ga0111484_10172542	F036103	MLKKWNNIIRILGIATCLVGAYLMAFGEPIIGADHAGIASIVGITGIGLIGTGNTLSFVGKKKEEP*
Ga0111484_1017295	Ga0111484_10172954	F030288	MEAIAPIDKQQNERIVWCERLLYLIVLLQFPQLASLI*
Ga0111484_1019228	Ga0111484_10192281	F020017	ADSGFQENFMTGGQMINQAGFGGLAPFISGARNIATGVGKFLGSPTGTGVGLATGLGSLAFTGSSDGRMKPVLTQSRRNKSKVRQLVNFMGIEGTAQFLSQSIGQNVSPNDVVALLLRTFRNDGAFITKAQVRNLRRTTNRFKSLEKQVKEATSMSRTTRRAPVRRASSTTLIKN*
Ga0111484_1021890	Ga0111484_10218902	F048645	MSNQWIDLVPVKWFEFKHTISAHPFCQECDLYGEKQWRCDPEYPAVLIDAPWPAFPDKERWIWMCESCFYGVVLVECE*
Ga0111484_1023850	Ga0111484_10238503	F054439	RITRNGSTIKQMAYAKKLFGGQGTSKKQIALDSGYSPSTANSIKEHIENKPGFNNAMAALAVDSNNLALAAMHEFKARGFEDFSNKDLIGALNAIGSAWAKFNYTKPERSDENRLGTNKLRNVILQNIENQTLIQGEEKAPIEVKDVEATTNEDF*
Ga0111484_1024583	Ga0111484_10245834	F036103	VINKQWGKIMNNWKNTIRALGIITCLIGAFLMAFGEPILGTTHTGVATVVGITGIGIITTVKKTSFLGKKK*
Ga0111484_1026147	Ga0111484_10261472	F026198	MEIEIAILVAGVLIMVGGIVGGGAIYSGLVKLAEAI*
Ga0111484_1026598	Ga0111484_10265981	F038920	LLTEIVTDDQLIKLYNEGGYLIAVDYTKQEIKLHTIDCMLADPISSVGVKPTKSKEAKTGEFWYSKERKEVTKKAEEIAKQKGYTYLDCAICNR*
Ga0111484_1026839	Ga0111484_10268393	F045540	VNKYIYTLATLLNNKSRAKKHYSPDTIISDLFDENLDEIDFIRSLSELELIYGFEIPEELYDRTYLTLEQFADELSKLEIIPDELYEEFFDIKFTAMKLTKRAIELEVKTDEVSKRELEEIDAEFEELTFRLNMVLENNDYTATLVN*
Ga0111484_1027315	Ga0111484_10273151	F026198	LLAGGDLMEIEIAILVAGVLIMVGGIIGGGAIYAGLEKLAEALKKQK*
Ga0111484_1028335	Ga0111484_10283351	F049307	MLTPDEYMSLMRLISSERESEGSTLADRESPGTSPVKKRSRSARASDKMLSKAFKEANARYRLKNGSLRKGRTQADIARLAHKLRKKM*
Ga0111484_1028335	Ga0111484_10283352	F025033	MPILPGGRRMNRRIKRNRAVPIHITLAPGLLDEIDARLSHKMSRSNWIRGACEMKLDKDVTEVNDLTDKQLVNILRNRHSYDGPAEAILKSLLEVLSE*
Ga0111484_1033049	Ga0111484_10330492	F009657	ILYDTGTCRKLVAKINRIAKEGWEAKSIGSLGNPAAGITGVYVLMEREITKPIRT*
Ga0111484_1033624	Ga0111484_10336242	F080660	MPDKKRSREEFEAYLKPMLNQDYPKVKYSNPDAWRIRASKEKQTH*
Ga0111484_1033984	Ga0111484_10339841	F048645	MSNNDGVDWMNTWIDEVPIKWFEFKHTISAHPFCQECDLYGEKQWRCDPEYPAVLIDAPWPAFPDKERWIWMC
Ga0111484_1035358	Ga0111484_10353582	F039389	LAFLGDFGKFFGLGSSAEVLGDVGGTIGGAFGLEGAGRKAGQFIGQATSSLGGTADQPLEQSAVPTPRPDKPGAQETSRSGSQTVNIIDTARGNGMTSQANLGFLAPFISQAGKFLSSRTGQIATGVGTGAALFGGGQDGRMRPVLTQSRRNKAKVRQLVNFMGIEGAANFLSQSSGNDVSPNDVVMLLLRTFRNDGAYITKAQVRNLRRTTNRFKSLEKQVKEATSMTKTTRRVSTPRRASTTTLIKN*
Ga0111484_1035358	Ga0111484_10353583	F021299	NSVKGLEWDTVATLTGDIGTIKKSIQTLNNRINGLNSPKLNDELLQYAIKQQNGAMHPPTDKLGG*
Ga0111484_1038762	Ga0111484_10387623	F045540	MLKYIFTIATLLDSKSKHKKHYSPDTVISDLFDENLDEIDFINSLSELELIYGFEIPEELFDRTDLTLAEFAEELSQLPVIPEELYPEFFDIKLASMKLTKRYIELENKTDFDSVREMQMIHVKFEELTDRLNIVLGNILVN*
Ga0111484_1039584	Ga0111484_10395842	F076162	ALVTGQPFGVLNGSYTNNDLITTGSQRNRVLVRFTNDTAATRTIRCGVFIGG*
Ga0111484_1039698	Ga0111484_10396982	F044785	MKRKEQKWNTILNQYLREKKMYCFYELKHTGEKDYFAFNKIEKVQWEGLQATEKNGLVWKLSDEISRPKPCDGFSIPPLPSYLIIKFMNEFCLIRFNKIIELRDKGVISVSRSKAEELSEKIIKL*
Ga0111484_1041545	Ga0111484_10415452	F088780	MNLIKKFTRGLTVVAMAPLCGLENKERNRRLEERLKRIENRDLA*
Ga0111484_1041693	Ga0111484_10416931	F086362	NDIPEDLKQLQYGRIEIDFQYNGGGLIYFMPLMYYGSINKNSSDDEVEEPEFHIAVEIGHYNVIPFPVEYLFYTICTYRQPQYCRDTFSPVITGENYTFVIDKKPEGMILQLKNGENILNIFPHAFFPDSSQMFFNDVSSYIDRNGGDSLQKVLMVGKGFAGIDRGIHDLNGQVTSLRIYKYTISDPDTGYEFKQVRNQHTENQQVTYSVHDSFAGDDKLIILKYQFFPYKFISGELVPDGLMLTGESEKLQNDHSSICYLKSTDIGFYKVNINTLDKDNNIIRSSSKPFEIWVYPKEWEFDFY*
Ga0111484_1043980	Ga0111484_10439801	F009657	MKEYEILYDTGTCRKLVSTINQMAKEGWEAKSIGSLGNPAAGITAVYVLMEHEITNPT*
Ga0111484_1046003	Ga0111484_10460032	F101860	MSDSMNDDVEKTLADPKHPIWKIMLGLVAVLSALWMNSN*
Ga0111484_1046358	Ga0111484_10463582	F008886	GYVLNDTVTTGQVRNRPVVTFTNNDAASVDLEVAIFIGG*
Ga0111484_1047493	Ga0111484_10474932	F045540	LAIHRLLNPLITTVSLHLKQPKYSLETIISGFFDQDLSEVDWILALGEIELVYGIEIPGELYDRTDLTLGEFAEELSQLPLIPDVLYEEFFDIKFTSMKLTKRYIELENKTDAESVREMQMINEKFEMLTDRLNVLLGNILVN*
Ga0111484_1050308	Ga0111484_10503082	F004784	MEDTKLKFVVHGRKDGDKFILEGITNFILQNLDSFDDKTIIVTFEKPVTNTIKLDNEDLFN*
Ga0111484_1057927	Ga0111484_10579271	F086362	NDEDDDVEEPQFHMAIEIGHYNVIPFPVEYLFYTICTYRQPQYCRDTFSPVITGGNYTFVIDKKPEGMILQLMREENILNIFPHAFFPDSSQLFFNDVSEYSDRNSGDSLQKVLMVGKGFAGIDRGIHDLNGQVTGLRIFKYSISDQDTGYELKKVRNQHSENQQVTFTPHDKLEGNDKFIRLSYRFFPYKFVMGELVKDGVMQTGESDKMQNDHSATCYLKPSNIGFYIVNISTLDKDNNIIRSSAKPFEIWVYPKEWEF
Ga0111484_1067844	Ga0111484_10678441	F025653	MSDPMKYFETKLKSMCLAELQEYRKRLDESITQKIAQTAPNEQIAPLILYRGIVEHEMKTRMSQM*
Ga0111484_1070403	Ga0111484_10704031	F078289	LGISQEVIQYFISNQTSSVSSEDVIKMKQSGLKNDDIMSAIKSDLYRPEQKSAAMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQHTNETQRTQYPTTGATFPKPDNYGYDPLNGRFLLLVKPQNQ*
Ga0111484_1076801	Ga0111484_10768011	F089866	LVLLTLVDGKKGPKDILVLVTSYNEPLTFAEWLFIGKCYLDSEASYYPIKEGYIGQAMLIHAINELALGVNFEQVLKRYKLNRKGKNLKVIDKRK
Ga0111484_1084064	Ga0111484_10840641	F043408	AQIAAQMDNFSQWVRIGLRSYGLQEDIATQAMRVVRYRKACLHLASTLIDYATQIDPDYKGNVEEIIAKALNQTTLEEFE*
Ga0111484_1097340	Ga0111484_10973401	F041592	MGRQEQCPRCGSKKIIITTNEKECKVCKNTWSGKVGGKTAKKGKVRF*
Ga0111484_1105975	Ga0111484_11059751	F074523	FQSQVDRNSSGNVNSSSNGLWDRYNPQRIAENYAVMVNNFTSYLLNTSNLINNALASNMRVYNTALEQTRDNVKACAKTNTNFIQSVSVNN*
Ga0111484_1106616	Ga0111484_11066162	F064504	LKFQSEQYYYQYKDAVMEAIGEDKMTCQEMSLKLDVHYNRIKWVMYRLRNEDHLSSYKYNDITYYLKPKPHPLQSIFGHEVKFTEDQIKGSQIYNEKDAKHNLRFNPDQDSFHGSSIVGEGVKIGT*
Ga0111484_1109343	Ga0111484_11093432	F101186	MDVFLGKEKSMISENQRKIFADFHKSVEAEGALDDKTSHMIKMAAAIAFGCYP*
Ga0111484_1115263	Ga0111484_11152631	F048676	RLCGTASDAVDAVKLEIPQGFKLLKFKMSEYLKYIVKLTISKI*
Ga0111484_1120098	Ga0111484_11200981	F025033	MDLDMRDLLLWHSFGRGGTMNRRIKRNRAVPIHITLAPTLLDEIDAQLSHKMSRSNWIRGACEMKLDKDVTEVNDLTDKQLVNILRNRHSYDGPAEAILKSLLEVLSK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007896: Microbial communities from sediment of the River Tyne Estuary, UK ? Live_176d_3

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences