Sample 3300031678

Basic Information
IMG/M Taxon OID	3300031678 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0324304 \| Ga0310114
Sample Name	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	37020025
Sequencing Scaffolds	47
Novel Protein Genes	50
Associated Families	46

Dataset Contents

Total Genome Size

37020025

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	43
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	2

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Ecosystem Assignment (GOLD)

Name

Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	Norway: Oslo
Coordinates	Lat. (^o)	59.997	Long. (^o)	10.7902	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

Norway: Oslo

Coordinates

Lat. (^o)

59.997

Long. (^o)

10.7902

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F001024	Metagenome / Metatranscriptome	803	Y
F001380	Metagenome / Metatranscriptome	709	Y
F001418	Metagenome / Metatranscriptome	698	Y
F001516	Metagenome / Metatranscriptome	679	Y
F004178	Metagenome / Metatranscriptome	449	Y
F004414	Metagenome / Metatranscriptome	439	Y
F009751	Metagenome / Metatranscriptome	313	Y
F010305	Metagenome / Metatranscriptome	305	Y
F011395	Metagenome / Metatranscriptome	291	Y
F012024	Metagenome / Metatranscriptome	284	Y
F015340	Metagenome / Metatranscriptome	255	Y
F016923	Metagenome / Metatranscriptome	243	Y
F017072	Metagenome / Metatranscriptome	243	Y
F017080	Metagenome / Metatranscriptome	242	N
F023505	Metagenome / Metatranscriptome	209	Y
F024050	Metagenome / Metatranscriptome	207	Y
F025423	Metagenome / Metatranscriptome	201	Y
F028056	Metagenome / Metatranscriptome	192	Y
F030305	Metagenome / Metatranscriptome	185	N
F031504	Metagenome / Metatranscriptome	182	Y
F034933	Metagenome / Metatranscriptome	173	Y
F035772	Metagenome / Metatranscriptome	171	Y
F036126	Metagenome / Metatranscriptome	170	Y
F036578	Metagenome / Metatranscriptome	169	Y
F038944	Metagenome / Metatranscriptome	164	Y
F039025	Metagenome / Metatranscriptome	164	Y
F039646	Metagenome / Metatranscriptome	163	N
F041057	Metagenome / Metatranscriptome	160	N
F041060	Metagenome / Metatranscriptome	160	Y
F043715	Metagenome / Metatranscriptome	155	Y
F045560	Metagenome / Metatranscriptome	152	Y
F050386	Metagenome / Metatranscriptome	145	Y
F056223	Metagenome / Metatranscriptome	137	Y
F059150	Metagenome / Metatranscriptome	134	Y
F059538	Metagenome / Metatranscriptome	133	N
F060406	Metagenome / Metatranscriptome	133	N
F061340	Metagenome / Metatranscriptome	132	Y
F062337	Metagenome / Metatranscriptome	130	N
F063716	Metagenome / Metatranscriptome	129	Y
F065397	Metagenome / Metatranscriptome	127	Y
F066368	Metagenome / Metatranscriptome	126	Y
F067292	Metagenome / Metatranscriptome	125	N
F078069	Metagenome / Metatranscriptome	116	Y
F084948	Metagenome / Metatranscriptome	111	Y
F089618	Metagenome / Metatranscriptome	108	N
F102578	Metagenome / Metatranscriptome	101	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0310114_110753	Not Available	892	Open in IMG/M
Ga0310114_111432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
Ga0310114_112216	Not Available	826	Open in IMG/M
Ga0310114_112221	Not Available	826	Open in IMG/M
Ga0310114_112321	Not Available	822	Open in IMG/M
Ga0310114_112613	Not Available	810	Open in IMG/M
Ga0310114_112781	Not Available	803	Open in IMG/M
Ga0310114_112826	Not Available	801	Open in IMG/M
Ga0310114_112854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	800	Open in IMG/M
Ga0310114_112893	Not Available	798	Open in IMG/M
Ga0310114_112935	Not Available	797	Open in IMG/M
Ga0310114_113517	Not Available	776	Open in IMG/M
Ga0310114_114093	Not Available	755	Open in IMG/M
Ga0310114_114105	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	754	Open in IMG/M
Ga0310114_114462	Not Available	742	Open in IMG/M
Ga0310114_116437	Not Available	682	Open in IMG/M
Ga0310114_116963	Not Available	668	Open in IMG/M
Ga0310114_117318	Not Available	659	Open in IMG/M
Ga0310114_117639	Not Available	650	Open in IMG/M
Ga0310114_118219	Not Available	636	Open in IMG/M
Ga0310114_118378	Not Available	632	Open in IMG/M
Ga0310114_118709	Not Available	625	Open in IMG/M
Ga0310114_118940	Not Available	620	Open in IMG/M
Ga0310114_119102	Not Available	616	Open in IMG/M
Ga0310114_119813	Not Available	601	Open in IMG/M
Ga0310114_120417	Not Available	589	Open in IMG/M
Ga0310114_120652	Not Available	585	Open in IMG/M
Ga0310114_120655	Not Available	585	Open in IMG/M
Ga0310114_120894	Not Available	580	Open in IMG/M
Ga0310114_120913	Not Available	580	Open in IMG/M
Ga0310114_121456	Not Available	570	Open in IMG/M
Ga0310114_121892	Not Available	563	Open in IMG/M
Ga0310114_121945	Not Available	562	Open in IMG/M
Ga0310114_122133	Not Available	559	Open in IMG/M
Ga0310114_122412	Not Available	554	Open in IMG/M
Ga0310114_122561	Not Available	552	Open in IMG/M
Ga0310114_123030	Not Available	544	Open in IMG/M
Ga0310114_123134	Not Available	543	Open in IMG/M
Ga0310114_123221	Not Available	541	Open in IMG/M
Ga0310114_123691	Not Available	534	Open in IMG/M
Ga0310114_123693	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	534	Open in IMG/M
Ga0310114_123749	Not Available	533	Open in IMG/M
Ga0310114_124264	Not Available	525	Open in IMG/M
Ga0310114_124410	Not Available	523	Open in IMG/M
Ga0310114_124550	Not Available	521	Open in IMG/M
Ga0310114_124583	Not Available	520	Open in IMG/M
Ga0310114_125860	Not Available	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0310114_110753	Ga0310114_1107531	F030305	PLQFIGSCIVPFGFLVPVPSFLFPALSDLARRCSSGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGYPQIARLPRLSTSCLAVDERPGCPDRSIIWLYRRRRFRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVAFRVSPDLPPSDICRFRFSGLPQIGFLGGSMMNPRFARTLHPRSIQLTFLQVAPKLPLPAAPRMNLQTHSGLAFLPTLRCSLNLYPLFACRRTGLLRTTINQFPIACRAGLQSVSLQ
Ga0310114_111432	Ga0310114_1114321	F001516	AVFGGSVLAAAVAVALAGMSGLRHLRKLVSGLSFPVVRPDGSQYPDAAESGGGDHTNVVQLDRSEYTEVR
Ga0310114_112216	Ga0310114_1122161	F061340	MNLTTNQITFLRDVPSDIKVDMRVGXRHHHFDALTIEELSDFIRRIGNDKIYLLIPLFVTSKSLSNATLNLSEPFLVDNESNPLLIIKFIIDQXNSSGFNRKQEIPITLSFKFKRVXFD
Ga0310114_112221	Ga0310114_1122211	F041060	MRPDTPLAVENGVGKLAAPQGSAECQHGKESMANSQPPIC
Ga0310114_112321	Ga0310114_1123211	F031504	MPRAYPIRGWELSARGRDYQLIPTFPRLPGIIPEGPAGGPPLARQPLRKPSV
Ga0310114_112613	Ga0310114_1126132	F004178	MRSITSHAARSSVGEHTARESECAQRVRRERACGERPPP
Ga0310114_112781	Ga0310114_1127811	F010305	LTWFAGRWRNHQFKRAEKPHSKSSGRKALDGPATRPETPLAVENGVGKLTAPEKGAPNVSPGKREWRTPI
Ga0310114_112826	Ga0310114_1128261	F017080	WRFNLDESVVQPVLRPLATPEAGLQLSLATSSSGCAGFEPPTCVGCSTSGSTGGQPSGSDRRSVLRLDRWQAPGFRRLHCASARPVANLPTCVGVLPPARPATNCRLTSGADPSARLVPNHRLSPAVVAAFSLRLLPLRLSSLRWLSPVCHTGGELPTRIGCYAIQLHRF
Ga0310114_112854	Ga0310114_1128541	F038944	MRSRTSHAAKSGVGEHTARESESAQCVPMGKSAWR
Ga0310114_112893	Ga0310114_1128931	F001024	MRPATPLAVENGVGKLAANVRQMPARERERGELPT
Ga0310114_112935	Ga0310114_1129351	F039646	AKTKHGGVAWTVTKMGGDTYQFEFVSCKPEMCKEYVPLRFLKPETRVEWAFNDTVVRGFLGWTWMTLTQGDRKYQLVDCDLTDKLRRYIAGKPRNARMKSELMNYARRLTNKADIIAIHGGGAHEVLVGRMSDYVENAFYCDVRHELEVAMSYWRRNHVVTEALTTYYETGKMPLDVAKIQKAIKVGVKTLTSAAHIPALALGAGALATGGIGPAVLASSMAVTSLMAVGGVQVWSHYSDPPPKW
Ga0310114_113517	Ga0310114_1135171	F089618	ATPVARLQLSLPLLPLAAPVSNLRLASAALPPARPRANPPARIGVFSPGSTGGKHPARTVCYALPIDWLLTFQLALASGLQLGLRLLPTHIWCRPSARQVLRLPVLTGFRRNHRLAPVAAAAPTRAGCCPLLPHRPRTSDSHRLLFRRLCRSRLTQLALCAPTSGWAFDAPLASTEPCIA
Ga0310114_114093	Ga0310114_1140931	F034933	MTGRESQAMSAEHSVGKAGREVEGAEQSELEAEGQVSRTK
Ga0310114_114105	Ga0310114_1141051	F065397	VQVRVFVSRLFSPDNLTLVMAIPKTTVTTDMRWMEIAPPRRVCGGRRRPFEKTLRPIGEERSVSNGELMEGLRPSFPAVSGFKAEGDNERFSSAQC
Ga0310114_114462	Ga0310114_1144621	F078069	AEWGEAIGDYYAAPWTKRSPSPETWEEWGTNIGNYYANKYATPNDVPGLPQYKREPSPSPETWEEWGTNIGNYYANKYATPDSVPGLPQFKREPSPKPETWEEWGTNIGNYYANKYATPNDVPGLPQYKREPSPSPSPETWEEWGTNIGNYYANKYATPDSVPGLPQF
Ga0310114_116437	Ga0310114_1164371	F060406	PGVSMLGELNSTTGCRVLRLPQRPTPSFRLRSRPLAAPARCFRLASTASHSGSTGGRLSRLGSAFCRSARSVANLRFASALRTAVRPLADLPACAGVLPQARPRTNFRLTSDLDPSARLVSNFRFAPVVVATSACAFCCCGLWLAPASARLPYPWRTSDSHRPVLPTGFTGFDSLGLRLAFLLPAGLLMHP
Ga0310114_116963	Ga0310114_1169631	F039646	ETRVEWAFSDTVVRGFLGWTWMTLTQGDRKYQLVDCDLTDKLRRYIAGKPRNARMKSELMNYARRLTNKADIIAIHGGGAHEVLVGRMSDYVENAFYCDVRHELEVAMSYWRRNHVVTEALTTYYETGKMPLDVAKIQKAIKVGVKTLTSAAHIPALALGAGALATGGVGPAVLASSMAVTSLMAVGGVEVWSHYSDPPPKW
Ga0310114_117318	Ga0310114_1173181	F045560	LKRVESDARKRKQASGIIPGDWGKVESGWLAQPLLEPVERPGGGGRIHQFLWQRSRAVSKREKGTER
Ga0310114_117639	Ga0310114_1176391	F067292	SVVQPLLRPLATPAADPQLALATASTGCAGFKPPTCVGCSTSGSTGGQPSGSDRCSVLRLDRWQAPGFHRLLCASVRPGADLPACAGVHPPARPATNCRLTPGADSSARLVPNFRLSPVVVAAFGLRLLLLRLLQLALGVARLPYRRRTSDSHRLLRRPASPVSTHSTCVECSYFRLGLRCTPCFDWTLHRRTSRR
Ga0310114_118219	Ga0310114_1182191	F024050	LPLGFGPSAVPAMVRSGCPALRMLSALLVSARCWVSPVALASSCSARDVGLGLPLVLHLRLYRQWIAELPRFSHFSALPTCQSSSCPESWPFGIADDSSSRLPQTPNPPAPADRYPSYLGSRTIRLALVASPGCPGHPPLATAINQFPGCPKSRVSRRSPIPRASH
Ga0310114_118378	Ga0310114_1183782	F050386	GPRKSYLWKRISELHKLMVDIQTAHAKLGSQDGNSREH
Ga0310114_118709	Ga0310114_1187091	F056223	HTLFPPFLSFLVFLLEEWEMAVIPHVREGSDHTEDDNPSPCLLDPAVGWVRNIPSPTLVAYREKVFPREIHHILPLERPGCWVTCDSIGLFLETECQFPLESEEDCYCHHEEHEFIPSYRRQGCGLTMLSVRKASVELIDLYRRFLLPELTSSKLKLVCSPENRDRWIVPSHFDAFLKRLYHN
Ga0310114_118940	Ga0310114_1189402	F001418	SSGEAEFTGFSDDGRTSSKANERSGGEKRLETVSNRIK
Ga0310114_119102	Ga0310114_1191021	F036126	VNSASPKLAFRLMRSPVNQPDPAFPQSPGIIHETLNLD
Ga0310114_119813	Ga0310114_1198131	F041057	GSTFPGQHAQPELGSSTRRDPHPSTLSKRVLIPLKMRDVATARVRRDPAIRSNQSLALGCGLSLACNDCAPCGCLRGRVNAPGLPLRTLPMAASAPFGLKAPRTGFLSDSATALHLPTRFASPLIGLQHRLTASSPLWDLAGFPSRRIPRAHRARPFDHTEKLTLVSSPIFLSSPAACLLWMPLDHRSGSATHLPGLLFH
Ga0310114_120417	Ga0310114_1204171	F016923	MLRCASAFFRSGRSSLLDTAFCSPTATADLSIRLRSRVNAPGLYLRNDPKIHARPVRLRTPAPVVAFFSPSGARSSHVARCQVRNQNSLSVLKPPLLSGTSRSLGLVALDLIPTRETYPCELPDLPSLPAVPEIISYSPAPRIIVPDPLLPARLAVLR
Ga0310114_120652	Ga0310114_1206522	F035772	MLLARCSSLDRLHRLRFQLPLPFGIVTSLRIEAFHWIRRRSARLPIPPDLLSLPAAGSISRVGYGSSFLVRYVSGGLLFLK
Ga0310114_120655	Ga0310114_1206551	F059538	LASQCLVNSVVQPLLRPSATPAARLQLSLPLLPLAAPVSNLRLASAALPPARPRANPPARIGVVSPGSVGGKCSAFAVNYALPIDWLLTFQLALASCLQLGLRLLPTHIWRCPSARQVSQFPVLTGYCCNN
Ga0310114_120894	Ga0310114_1208941	F063716	LKGNLRVKRRDPWHGANALSKTAADPVLMAETRKK
Ga0310114_120913	Ga0310114_1209131	F034933	GRGSQAMSAERSAGKAGREVKGAEQSELEAEGQVSSTK
Ga0310114_121374	Ga0310114_1213741	F062337	FEPPTCVGCPTSGSTAGQPSGSDRCCLAWLGQWQVLSFRCVLRASDRLAADLPTRVGVRPPARPAITTDSHLALSFSSAGLTASGSHRLPLQQLACAGCCCNPQLALAVATFRHTGGVLPTRIGCSALRLYRFRFTRLAPCASTSGWAFDAPLTSTEPCIAGKPSMSIPYPPVRASSGSASLTTFDLRRL
Ga0310114_121456	Ga0310114_1214561	F059150	EEQRAKRKRSEPGTLIRSLNYSNRAGGGERRAIGRIREVNLSIGDRVEHFDPEGHKGPEGEWRSGG
Ga0310114_121456	Ga0310114_1214562	F011395	MAAWKQAVVTGERKAVARCRFQPERKQATSKALIRGSQKGQRGAEELSPGIRLQSSEPCMPASGQAELRI
Ga0310114_121892	Ga0310114_1218921	F066368	LAPGQPPLLTVRSPDATGLASSLIDCFFSQSSGAVFNIAGLRKFVHAACPAIVSFPLQVLFLVRFSAFSFGELNFYFESCRDAHTVLIRSSNQSLFWQLRFIQARNLPELLHSNRSGFSSLLTADPPFAFGARERTRGTGEFCLRCLPFGRFLEEPGQST
Ga0310114_121945	Ga0310114_1219451	F009751	PTIQLPSGMHGRSCAIWVCVRIAPLLPAPEFRPTRINARRRASLHSPNQNLLLGTTFRSLEKTARYRATFPKSMLLTYPFGSPLSLPRARSVQSLIHAIWLAPDGANSSRQTRCPVPSERPRPFFRPPLPFGAFGPLPIKAVT
Ga0310114_122133	Ga0310114_1221331	F012024	MHGTEHRVSERRALRLLAPRKPFYPASASKLPDAPQPLCLSKTGPFARNGLSLTRMTSACAGPSPGSKILACYFAHSLAGLPARSALWLRRQPLVCPSFRLHPRLKPVAFFTGLLCRLCSLPPLPFRSFRSLRIKASTGFATVRSTFRNRPIFVRSPQPFH
Ga0310114_122412	Ga0310114_1224122	F017072	MRMRDLAARSDEKPLRVESSSPGKFRFRMNRSHPEGEQLLLCISTVRTALAGLNKIKTAQRKTPKGGQKERTHREEHGNSAGSVKNFRAPAMLKTTPLDCEIKSNLREKRRDPWPRANAPSKAVADPE
Ga0310114_122561	Ga0310114_1225611	F015340	VCLPGSQAGDRNRQPKRAKRPHSKFSDRKALDGPAMRPTTPLAVENGVGKL
Ga0310114_123030	Ga0310114_1230301	F102578	VATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVRSIVPLTLD
Ga0310114_123056	Ga0310114_1230561	F039025	LVVQPALRPSATPVASLQLSLPLLPLAAPAFNLRLASAANFPARPRANLPARIGVFSPGSLGGKYPTFAVHYALPIDWLLTFQLALVSGLQLGLRLLPTHTWRRPSARLVSQLPVLTGCRCNGQLALPIAATPNSRWRLPPIATPVANIRLASAVPLRLCRFQLARLAPCAFTSGWAFDA
Ga0310114_123134	Ga0310114_1231341	F001380	LHADVRFATRCSLINSSSLSAAAFQHAAGHSSQHILVGLSTMPEPESRYGLSLAHNDAFATIARSMFLACTFVSTSKTFANPFDCVLFRSARFRGRSGAMSTPATRFPRQFPTFLTRPQSPLPFGSSCENPPDQSVRPVQNPETRLTRRPIVPYSPLLPLAIPLRISA
Ga0310114_123221	Ga0310114_1232212	F004414	VSLIEGGFGNRASNTKRRAKQRRTARAAAPLLIPLALALTLGVILAVSSGAPTSHVTQQSGNSSHP
Ga0310114_123691	Ga0310114_1236911	F084948	PPSFPLPPLTRTMIFDLSRELINARLGRAPTRGRDEKSKYSRDIVSVVEVENCLPVLKKSGKRQRGYSFLHTESSPLSYDEDQPAPKYDSHNQPIPPGLQLKRYSSSQRYNSCQNQLVRDLSVKLIAVVLPKQSSTPLRAEPRKIVNEDIRVRKLRGDKRDLSYCLPKTQVTPRPPS
Ga0310114_123693	Ga0310114_1236931	F065397	LVQVGVCVSRFFSPDKLALVMAIPKTMATTDMRWMEIAPPRRVCMGRRRPLEKTLRPIAEERSLSNGELIDGLCPTFPAVMCFKLEGDNESYVSADC
Ga0310114_123749	Ga0310114_1237491	F050386	AFRLRGPRKSYLWKRISEVHKLMVDIQTAHAKLGSQEGNSREHRSRSQMIIK
Ga0310114_124264	Ga0310114_1242641	F023505	NGKDDRKEVGEVPRIIPGDRGKVGSGWLAQPLEDRFARGGNRRQYSPVPLAAFARSQ
Ga0310114_124410	Ga0310114_1244101	F043715	KSTTTTMKFTSVLIALCATAVAADSRPFKFKLVTPKSTVYLTASGAGTSSPAGAVDCTISGGAIACGPNKGGLGTAMHNKMQPSARAANNRGWSVTANNRIIYAPYGKPFNLVTRGRDLWVENCDAHPDGRTFVKGEAYAVYA
Ga0310114_124550	Ga0310114_1245501	F036578	MPEELVNAASPPNLSVLLQRDRVNQPDPTFPQSPGIILETNRAIFQS
Ga0310114_124583	Ga0310114_1245831	F028056	PGFTARLSEPPACSALDPQPDTPDSTSAARRRRFSARAGSVQQTFPQRTCIRPEPETRNGLSLARNDAFATITRSTFLACPFESTYKLCADPFHRRLSTRFGFEAATGRIHHPRPVINALLIRSHDATPSPLPFGLFLPSGSERSTGFITGSSPYRTPDLPLAPRRAFFRLR
Ga0310114_125860	Ga0310114_1258601	F025423	VPSDPIPSLAHHGHATVLSLALRSAVRLACLLPGNRFGGYRFNAFRRAAAYLSETGPSARNGLSLSRNGFRFRELHSRVNGPGLLLRCLDCRLPCPFGLSAPLPELVCPNPRRFHASGPSHVRLQTHLAALPTSTPLQEFFAPSGSKRSMGVAAIRSAFRIRPISAR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031678: Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences