UHGV-0000783 (vOTU-068446)

Viral Genome: UHGV-0000783

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0000783
vOTU ID	vOTU-068446
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_A_22_1120__NODE_1635_length_43140_cov_6.267236_1
Associated BioSample	SAMEA4765580
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9692
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.79
Jumbo phage	No

Genome content
Genome length (bp)	35,074
GC content	45.83%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	94%
Average CDS length (bps)	625.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0000783_1	PF19495,TIGR03931	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_3	phrog_1847	515.3	0	N/A	unknown function
UniRef90	UHGV-0000783_3	UniRef90_A0A3A6GS55	443.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000783_3	1235792.C808_05258	439.0	0	N/A	N/A
Pfam	UHGV-0000783_3	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-0000783_3	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0000783_3	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-0000783_3	PF13250,PF19824	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_4	phrog_87	42.4	0.0000000000058	metallo-protease	other
UniRef90	UHGV-0000783_4	UniRef90_A0A1Y4EYX7	146.0	1.01e-39	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_4	428125.CLOLEP_01867	136.0	7.43e-37	N/A	N/A
Pfam	UHGV-0000783_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0000783_4	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_5	K22299	50.0	0.000000000000065	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0000783_5	phrog_8	77.7	2.1e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000783_5	UniRef90_UPI00189C2E14	124.0	2.07e-34	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_5	742733.HMPREF9469_01855	98.6	3.56e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0000783_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000783_5	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0000783_5	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_6	K22300	42.0	0.000000000018	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0000783_6	phrog_8	61.3	2.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000783_6	UniRef90_A0A2N0KB25	91.7	3.74e-23	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0000783_6	1304866.K413DRAFT_0833	86.7	7.06e-22	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0000783_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0000783_6	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_7	K07741	103.1	6.2e-30	antB; anti-repressor protein	N/A
PHROG	UHGV-0000783_7	phrog_130	276.9	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0000783_7	UniRef90_R9IFV1	382.0	0	Anti-repressor protein	N/A
eggNOG-mapper	UHGV-0000783_7	397288.C806_04963	382.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0000783_7	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0000783_7	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0000783_7	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0000783_7	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_11	phrog_424	101.2	8.1e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0000783_11	UniRef90_C0CTA2	469.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0000783_11	693746.OBV_43240	500.0	0	N/A	N/A
COG	UHGV-0000783_11	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0000783_11	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_12	phrog_561	149.3	1.68156e-44	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000783_12	UniRef90_UPI0011C8A287	244.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0000783_12	33035.JPJF01000071_gene4462	222.0	0	N/A	N/A
structural_annotation	UHGV-0000783_12	PF03837,TIGR01913	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_13	K03546	42.5	0.0000000000034	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0000783_13	phrog_1499	295.3	0	N/A	unknown function
UniRef90	UHGV-0000783_13	UniRef90_A0A1C6FNE5	860.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0000783_13	1120998.AUFC01000030_gene2215	609.0	0	DNA recombination	N/A
Pfam	UHGV-0000783_13	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0000783_13	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0000783_13	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_14	phrog_1227	252.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000783_14	UniRef90_UPI00041F978E	302.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_14	1120998.AUFC01000030_gene2216	302.0	0	N/A	N/A
Pfam	UHGV-0000783_14	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0000783_14	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0000783_14	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_15	phrog_3490	146.3	1.4013e-43	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000783_15	UniRef90_A0A1C6FNL5	287.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_15	357809.Cphy_2986	182.0	0	N/A	N/A
Pfam	UHGV-0000783_15	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0000783_15	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_16	K03111	110.8	2.1e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0000783_16	phrog_44	120.2	1.8e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000783_16	UniRef90_A0A1C6FN64	240.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0000783_16	641112.ACOK01000080_gene3234	152.0	4.2039e-45	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0000783_16	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0000783_16	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0000783_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0000783_16	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0000783_16	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_17	phrog_16304	84.6	1.6e-24	N/A	unknown function
UniRef90	UHGV-0000783_17	UniRef90_A0A1C6FNF0	232.0	0	N/A	N/A
Pfam	UHGV-0000783_17	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0000783_17	PF19808	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000783_21	1304866.K413DRAFT_4636	75.9	0.0000000000000041	N/A	N/A
structural_annotation	UHGV-0000783_21	PF17457	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_22	phrog_36	62.6	7.7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000783_22	UniRef90_A0A4Z0XVP8	58.9	0.0000000302	RNA polymerase sigma factor SigO	N/A
eggNOG-mapper	UHGV-0000783_22	1265507.KB899636_gene1634	66.2	0.00000000000724	N/A	N/A
Pfam	UHGV-0000783_22	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0000783_22	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_23	K07474	158.9	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0000783_23	phrog_51	157.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0000783_23	UniRef90_A0A1C6FN08	203.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0000783_23	1499683.CCFF01000014_gene3916	135.0	1.33e-37	Terminase small subunit	N/A
Pfam	UHGV-0000783_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0000783_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0000783_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_24	K06909	112.7	4.5e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0000783_24	phrog_2	124.4	1.4e-36	terminase large subunit	head and packaging
UniRef90	UHGV-0000783_24	UniRef90_A0A1C6FMV1	850.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0000783_24	1120998.AUFC01000030_gene2231	362.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0000783_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0000783_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0000783_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0000783_24	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_25	phrog_533	381.4	0	portal protein	head and packaging
UniRef90	UHGV-0000783_25	UniRef90_A0A1C6FMT2	929.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0000783_25	997296.PB1_16244	310.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0000783_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0000783_25	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0000783_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_26	phrog_581	312.6	0	minor head protein	head and packaging
UniRef90	UHGV-0000783_26	UniRef90_A0A1C6FMR4	748.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0000783_26	428125.CLOLEP_01802	251.0	0	N/A	N/A
Pfam	UHGV-0000783_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0000783_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000783_26	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000783_27	UniRef90_R6N9N1	50.1	0.00000901	Mucin-5AC	N/A
PHROG	UHGV-0000783_31	phrog_2245	73.6	3.1e-21	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0000783_31	UniRef90_A0A417IIQ4	70.1	0.000000000000186	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_31	1680.BADO_1259	65.9	0.00000000000106	N/A	N/A
structural_annotation	UHGV-0000783_31	PF12643,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_32	phrog_918	96.1	2.1e-28	N/A	unknown function
UniRef90	UHGV-0000783_32	UniRef90_UPI000EC62F11	110.0	6.3e-30	N/A	N/A
eggNOG-mapper	UHGV-0000783_32	537007.BLAHAN_05515	102.0	2.51e-27	N/A	N/A
Pfam	UHGV-0000783_32	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0000783_32	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_33	K06223	80.1	3.1e-23	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0000783_33	phrog_56	106.8	2.8e-31	DNA methyltransferase	other
UniRef90	UHGV-0000783_33	UniRef90_A0A3A8UDM3	248.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-0000783_33	641526.ADIWIN_2664	152.0	8.73009e-43	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0000783_33	MTase_II_00080	46.6	0.00000000000014	Type II methyltransferase	RM
Pfam	UHGV-0000783_33	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0000783_33	PF02086,MF_01012,TIGR00571,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_34	phrog_2303	96.7	2e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-0000783_34	UniRef90_A0A0N7BTJ7	83.6	1.76e-16	N/A	N/A
eggNOG-mapper	UHGV-0000783_34	1391647.AVSV01000003_gene1807	105.0	1.55e-25	N/A	N/A
structural_annotation	UHGV-0000783_34	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_35	phrog_267	70.5	7.1e-21	major head protein	head and packaging
UniRef90	UHGV-0000783_35	UniRef90_A0A1C6GMA6	562.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_35	718252.FP2_06660	268.0	0	N/A	N/A
structural_annotation	UHGV-0000783_35	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_36	phrog_541	78.6	7.2e-23	head-tail adaptor	connector
PHROG	UHGV-0000783_37	phrog_793	54.8	0.0000000000000018	head-tail adaptor	connector
eggNOG-mapper	UHGV-0000783_37	1238184.CM001792_gene97	51.6	0.000000743	Minor capsid protein	N/A
Pfam	UHGV-0000783_37	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0000783_37	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0000783_37	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_38	phrog_556	62.9	4.5e-18	minor head protein	head and packaging
Pfam	UHGV-0000783_38	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0000783_38	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000783_39	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_40	phrog_820	52.1	0.0000000000000095	major tail protein	tail
UniRef90	UHGV-0000783_40	UniRef90_A0A174M1L1	109.0	1.45e-25	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0000783_40	411461.DORFOR_01172	106.0	4.22e-26	N/A	N/A
structural_annotation	UHGV-0000783_40	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
COG	UHGV-0000783_41	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
KOfam	UHGV-0000783_42	K19157	130.1	1.6e-38	yafQ; mRNA interferase YafQ [EC:3.1.-.-]	N/A
PHROG	UHGV-0000783_42	phrog_7251	122.2	1.4e-36	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0000783_42	UniRef90_C7NBQ0	144.0	2.36819e-43	Addiction module toxin, RelE/StbE family	N/A
eggNOG-mapper	UHGV-0000783_42	523794.Lebu_1724	147.0	2.8026e-45	endonuclease activity	N/A
Pfam	UHGV-0000783_42	PF15738	N/A	N/A	Bacterial toxin of type II toxin-antitoxin system, YafQ	YafQ_toxin
NCBIFam	UHGV-0000783_42	TIGR00053.1	N/A	N/A	YafQ family addiction module toxin	N/A
COG	UHGV-0000783_42	COG3041	N/A	N/A	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0000783_42	PF15738,TIGR00053,COG3041	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000783_43	536233.CLO_0892	60.1	0.000000000596	N/A	N/A
structural_annotation	UHGV-0000783_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_44	phrog_706	119.1	3.6e-35	N/A	unknown function
UniRef90	UHGV-0000783_44	UniRef90_A0A1C6GMP1	199.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0000783_44	1321782.HMPREF1986_02275	61.2	0.00000000742	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0000783_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0000783_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_45	phrog_6900	242.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0000783_45	UniRef90_A0A1C6GMQ4	781.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0000783_45	411470.RUMGNA_02076	262.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0000783_45	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0000783_46	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000783_47	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000783_50	PF21621,PF21253,MF_01537,NF007875,COG3123	N/A	N/A	N/A	N/A
PHROG	UHGV-0000783_52	phrog_199	91.4	9.4e-27	holin	lysis
UniRef90	UHGV-0000783_52	UniRef90_C7XVW4	142.0	9.99995e-41	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0000783_52	324831.LGAS_1487	142.0	3.14998e-41	Bacteriophage holin family	N/A
Pfam	UHGV-0000783_52	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0000783_52	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0000783_52	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0000783_52	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0000783_53	K21471	42.4	0.000000000013	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0000783_53	UniRef90_A0A1C6GMR6	337.0	0	NlpC/P60 family	N/A
eggNOG-mapper	UHGV-0000783_53	394503.Ccel_3272	136.0	7.42e-37	NLP P60 protein	N/A
Pfam	UHGV-0000783_53	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0000783_53	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0000783_53	PF05382,PF08239,NF033743,COG0791	N/A	N/A	N/A	N/A