UHGV
Home
Browse
vOTUs
Genomes
Protein clusters and structures
Microbial hosts
Tools
Contig classification
Protein sequence search
Structure search
REST API
Downloads
Help
Structure search
Paste the coordinates of a protein structure or load a protein structure file.
Load example
Note:
Your input must be in one of the standardized Protein Data Bank (PDB) formats (
Legacy PDB
or
PDBx/mmCIF
). For data uploads, submitted files should have the proper extension (*.pdb, *.cif, or *.mmcif).
Adjust search parameters
Search algorithm:
Method:
Reseek
FoldSeek
Sensitivity mode:
Fast
Sensitive (slower)
Very Sensitive (slowest)
Report thresholds:
Max. E-value:
Min. coverage (%):
Coverage mode:
Bidirectional
Based on query length
Based on target length
Note:
Reseek and Foldseek employ different alignment approaches and may produce different results. For more information, please consult the Help Section.
Open results in new tab.
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our
privacy policy
.
OK