UHGV-0001363 (vOTU-092675)

Viral Genome: UHGV-0001363

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0001363
vOTU ID	vOTU-092675
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_B_1_2682__NODE_142_length_140998_cov_9.153788_1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.09 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9761
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.77
Jumbo phage	No

Genome content
Genome length (bp)	26,134
GC content	55.44%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	94%
Average CDS length (bps)	660.57
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0001363_1	K01447	92.5	6.9e-27	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0001363_1	phrog_9611	104.1	1.6e-30	endolysin	lysis
UniRef90	UHGV-0001363_1	UniRef90_R5GLE2	158.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0001363_1	476272.RUMHYD_02976	122.0	1.3e-31	N/A	N/A
Pfam	UHGV-0001363_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0001363_1	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0001363_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0001363_1	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001363_2	621372.ACIH01000120_gene2143	57.0	0.000000000762	N/A	N/A
PHROG	UHGV-0001363_3	phrog_1863	74.5	8.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0001363_3	1203606.HMPREF1526_02027	99.8	1.09e-26	N/A	N/A
PHROG	UHGV-0001363_5	phrog_23052	148.5	4.2039e-44	N/A	unknown function
eggNOG-mapper	UHGV-0001363_5	411470.RUMGNA_00456	123.0	9.95e-27	N/A	N/A
structural_annotation	UHGV-0001363_5	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_6	phrog_1194	56.7	4.4e-16	N/A	unknown function
Pfam	UHGV-0001363_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0001363_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_8	phrog_1535	140.4	1.40004e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0001363_8	397290.C810_05237	232.0	0	tape measure	N/A
COG	UHGV-0001363_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
Pfam	UHGV-0001363_9	PF02183	N/A	N/A	Homeobox associated leucine zipper	HALZ
PHROG	UHGV-0001363_10	phrog_706	113.3	2.4e-33	N/A	unknown function
UniRef90	UHGV-0001363_10	UniRef90_A0A542AIV5	160.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0001363_10	1235790.C805_00084	102.0	6.55e-25	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0001363_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0001363_10	PF06854	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001363_11	UniRef90_A0A2Z4QA03	92.0	4.39e-21	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0001363_11	1120746.CCNL01000014_gene2103	117.0	8.05e-32	N/A	N/A
structural_annotation	UHGV-0001363_11	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_12	phrog_3099	129.1	3.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0001363_12	645991.Sgly_0346	123.0	1.58e-33	N/A	N/A
structural_annotation	UHGV-0001363_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_13	phrog_3266	41.4	0.000000000014	tail completion	connector
eggNOG-mapper	UHGV-0001363_13	1120746.CCNL01000014_gene2101	53.5	0.000000326	N/A	N/A
structural_annotation	UHGV-0001363_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_14	phrog_556	104.7	6e-31	minor head protein	head and packaging
UniRef90	UHGV-0001363_14	UniRef90_A0A542AIW0	105.0	5.11e-27	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0001363_14	1120746.CCNL01000014_gene2100	103.0	4.9e-27	Minor capsid protein	N/A
Pfam	UHGV-0001363_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
PHROG	UHGV-0001363_15	phrog_3366	68.3	1.4e-19	N/A	unknown function
structural_annotation	UHGV-0001363_15	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_16	phrog_541	87.0	2e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0001363_16	663278.Ethha_0495	53.5	0.00000019	N/A	N/A
PHROG	UHGV-0001363_17	phrog_422	328.7	0	major head protein	head and packaging
UniRef90	UHGV-0001363_17	UniRef90_R5H4X0	349.0	0	Lj928 prophage protein	N/A
eggNOG-mapper	UHGV-0001363_17	203119.Cthe_2479	347.0	0	N/A	N/A
structural_annotation	UHGV-0001363_17	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_18	phrog_194	57.3	3.6e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0001363_18	UniRef90_A0A846KF53	57.4	0.000000829	Viral A-type inclusion protein	N/A
eggNOG-mapper	UHGV-0001363_18	545697.HMPREF0216_02848	69.7	0.00000000000304	Phage minor structural protein GP20	N/A
Pfam	UHGV-0001363_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0001363_18	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_20	phrog_581	252.3	0	minor head protein	head and packaging
UniRef90	UHGV-0001363_20	UniRef90_A0A1C6GGW2	274.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0001363_20	1292035.H476_1017	248.0	0	N/A	N/A
Pfam	UHGV-0001363_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0001363_20	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0001363_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001363_20	PF06152,PF15542	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_21	phrog_533	242.1	0	portal protein	head and packaging
UniRef90	UHGV-0001363_21	UniRef90_R5H044	400.0	0	Phage portal protein putative A118 family	N/A
eggNOG-mapper	UHGV-0001363_21	883114.HMPREF9709_01198	137.0	5.31e-33	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0001363_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0001363_22	K06909	121.9	7.5e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0001363_22	phrog_2	134.5	1.3e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0001363_22	UniRef90_R5LMY1	384.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0001363_22	592031.GCWU000322_00074	244.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0001363_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0001363_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0001363_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0001363_22	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001363_23	1160721.RBI_II00544	59.3	0.00000000561	N/A	N/A
structural_annotation	UHGV-0001363_23	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0001363_24	K05785	57.3	2.6e-16	rfaH; transcriptional antiterminator RfaH	N/A
PHROG	UHGV-0001363_24	phrog_6386	65.5	7.9e-19	transcription antiterminator	transcription regulation
UniRef90	UHGV-0001363_24	UniRef90_A0A174ZTH1	129.0	3.46e-35	Transcription termination factor nusG	N/A
eggNOG-mapper	UHGV-0001363_24	485916.Dtox_4226	75.9	0.00000000000000553	antitermination protein NusG	N/A
Pfam	UHGV-0001363_24	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0001363_24	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0001363_24	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_25	phrog_426	80.6	2.8e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0001363_25	UniRef90_R5GR06	261.0	0	PF11985 family protein	N/A
eggNOG-mapper	UHGV-0001363_25	1160721.RBI_II00546	157.0	0	N/A	N/A
Pfam	UHGV-0001363_25	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0001363_25	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-0001363_28	phrog_4292	72.0	5.2e-21	N/A	unknown function
UniRef90	UHGV-0001363_28	UniRef90_A0A7G3VS96	57.0	0.00000000129	Putative NHN endonuclease	N/A
eggNOG-mapper	UHGV-0001363_28	1121091.AUMP01000032_gene3076	63.9	0.00000000000038	N/A	N/A
KOfam	UHGV-0001363_29	K12283	63.4	3.5e-18	mshM; MSHA biogenesis protein MshM	N/A
PHROG	UHGV-0001363_29	phrog_296	125.2	7.3e-37	DNA transposition protein	integration and excision
UniRef90	UHGV-0001363_29	UniRef90_A0A175A3H1	338.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0001363_29	663278.Ethha_0076	160.0	5.04467e-44	AAA domain	N/A
Pfam	UHGV-0001363_29	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0001363_29	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0001363_29	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
KOfam	UHGV-0001363_30	K07497	45.7	0.0000000000011	K07497; putative transposase	N/A
PHROG	UHGV-0001363_30	phrog_310	334.3	0	transposase	integration and excision
UniRef90	UHGV-0001363_30	UniRef90_R5H7J6	818.0	0	Integrase core domain protein	N/A
eggNOG-mapper	UHGV-0001363_30	1160721.RBI_II00555	603.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0001363_30	TnsB_0_V-K	50.8	0.0000000000000037	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0001363_30	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0001363_30	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0001363_30	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0001363_36	K22300	51.4	0.000000000000026	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0001363_36	phrog_8	53.5	0.0000000000000061	transcriptional regulator	transcription regulation
UniRef90	UHGV-0001363_36	UniRef90_A0A1M6L004	60.5	0.000000000133	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0001363_36	888727.HMPREF9092_0973	55.8	0.0000000285	N/A	N/A
Pfam	UHGV-0001363_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0001363_36	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0001363_36	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0001363_37	K01356	73.1	5.9e-21	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0001363_37	phrog_4	96.1	4.6e-28	transcriptional repressor	transcription regulation
UniRef90	UHGV-0001363_37	UniRef90_A0A374I002	228.0	0	S24 family peptidase	N/A
eggNOG-mapper	UHGV-0001363_37	1160721.RBI_II00559	151.0	1.80067e-42	Peptidase S24-like	N/A
Pfam	UHGV-0001363_37	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0001363_37	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0001363_37	PF00717,PF01381,MF_00015,NF041951,NF007621,COG2932	N/A	N/A	N/A	N/A