UHGV-0001597 (vOTU-166429)

Viral Genome: UHGV-0001597

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0001597
vOTU ID	vOTU-166429
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-A-D_O_4_1196__NODE_6242_length_18671_cov_15.594977_1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.07 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	3
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9713
Virus hallmark genes (geNomad)	0
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	8.47
Jumbo phage	No

Genome content
Genome length (bp)	11,438
GC content	51.98%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	19
CDS density	94%
Average CDS length (bps)	564.00
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0001597_2	NF041070	N/A	N/A	N/A	N/A
KOfam	UHGV-0001597_6	K03529	40.0	0.000000000021	smc; chromosome segregation protein	N/A
PHROG	UHGV-0001597_6	phrog_1535	78.2	3.1e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0001597_6	693746.OBV_18190	144.0	6.95e-33	domain protein	N/A
COG	UHGV-0001597_6	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001597_6	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0001597_7	phrog_706	120.7	1.1e-35	N/A	unknown function
UniRef90	UHGV-0001597_7	UniRef90_UPI001D069FB9	204.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0001597_7	693746.OBV_18170	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0001597_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0001597_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0001597_8	phrog_11299	81.7	1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0001597_8	693746.OBV_18160	181.0	0	N/A	N/A
structural_annotation	UHGV-0001597_8	PF10666	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001597_12	UniRef90_UPI001ADEF26B	70.1	0.000000000000594	phBC6A51 family helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0001597_12	240302.BN982_03343	77.4	1.41e-16	N/A	N/A
structural_annotation	UHGV-0001597_12	PF13022	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001597_13	UniRef90_UPI001F4290AF	151.0	7.63708e-43	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0001597_13	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A
structural_annotation	UHGV-0001597_13	PF07638,MF_00959,NF006147,COG0568	N/A	N/A	N/A	N/A
KOfam	UHGV-0001597_14	K02315	160.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0001597_14	phrog_50	151.5	5.60519e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001597_14	UniRef90_UPI00195C3322	272.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0001597_14	1121344.JHZO01000004_gene1170	268.0	0	N/A	N/A
Pfam	UHGV-0001597_14	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0001597_14	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0001597_14	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0001597_14	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0001597_15	phrog_8489	217.4	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001597_15	UniRef90_UPI0018994D15	221.0	0	replisome organizer	N/A
eggNOG-mapper	UHGV-0001597_15	1507.HMPREF0262_00303	267.0	0	DnaD domain protein	N/A
COG	UHGV-0001597_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0001597_15	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0001597_16	phrog_2113	50.3	0.000000000000031	N/A	unknown function
eggNOG-mapper	UHGV-0001597_16	1160721.RBI_II00485	59.3	0.000000000383	N/A	N/A
structural_annotation	UHGV-0001597_16	PF08279,COG1654	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001597_17	877411.JMMA01000002_gene1734	45.8	0.00000745	N/A	N/A
Pfam	UHGV-0001597_17	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0001597_17	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0001597_17	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001597_18	UniRef90_A0A3A6FKP7	64.3	0.00000000466	XRE family transcriptional regulator	N/A
Pfam	UHGV-0001597_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0001597_19	K14059	278.9	0	int; integrase	N/A
PHROG	UHGV-0001597_19	phrog_1	205.0	0	integrase	integration and excision
UniRef90	UHGV-0001597_19	UniRef90_UPI001C02FB7B	649.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0001597_19	877411.JMMA01000002_gene2540	424.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0001597_19	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0001597_19	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0001597_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0001597_19	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0001597_19	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A