UHGV-0002691 (vOTU-127553)

Viral Genome: UHGV-0002691

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0002691
vOTU ID	vOTU-127553
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-E-H_O_22_1935__NODE_929_length_58039_cov_10.996066_1
Associated BioSample	SAMEA4766113
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	83.36 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9707
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.04
Jumbo phage	No

Genome content
Genome length (bp)	33,194
GC content	46.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	94%
Average CDS length (bps)	600.64
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 83.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0002691_1	PF20385	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002691_5	PF01381,NF041575,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0002691_6	K22300	45.3	0.0000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0002691_6	UniRef90_A0A350TVJ4	116.0	1.7e-32	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0002691_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0002691_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0002691_7	phrog_7445	50.9	0.000000000000026	N/A	unknown function
UniRef90	UHGV-0002691_7	UniRef90_A0A4R2RNJ6	67.8	0.00000000000318	PcfK-like protein	N/A
eggNOG-mapper	UHGV-0002691_7	1123288.SOV_1c10500	56.2	0.0000000144	N/A	N/A
Pfam	UHGV-0002691_7	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0002691_7	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_8	phrog_8470	265.4	0	N/A	unknown function
UniRef90	UHGV-0002691_8	UniRef90_UPI001875A728	517.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0002691_8	1157490.EL26_01845	168.0	2.34017e-42	PcfJ-like protein	N/A
Pfam	UHGV-0002691_8	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0002691_8	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_9	phrog_15609	176.1	0	N/A	unknown function
UniRef90	UHGV-0002691_9	UniRef90_UPI001875FF23	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-0002691_9	1007096.BAGW01000031_gene118	152.0	7.85e-40	N/A	N/A
Pfam	UHGV-0002691_9	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0002691_9	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0002691_9	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_11	phrog_3584	177.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002691_11	UniRef90_I2E8X7	100.0	7.73e-22	Gp31	N/A
eggNOG-mapper	UHGV-0002691_11	318464.IO99_13830	90.1	1.51e-18	N/A	N/A
structural_annotation	UHGV-0002691_11	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_12	phrog_7566	89.8	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0002691_12	1280698.AUJS01000007_gene1020	68.6	0.000000000000374	N/A	N/A
KOfam	UHGV-0002691_14	K03111	126.0	4.8e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0002691_14	phrog_44	120.3	1.4e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002691_14	UniRef90_A0A396P910	207.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0002691_14	97138.C820_02339	163.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0002691_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0002691_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0002691_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0002691_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0002691_14	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_15	phrog_424	88.2	8.4e-26	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0002691_15	693746.OBV_43240	554.0	0	N/A	N/A
COG	UHGV-0002691_15	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0002691_15	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002691_16	PF11132	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002691_17	318464.IO99_07375	105.0	2.9e-28	N/A	N/A
PHROG	UHGV-0002691_19	phrog_11237	86.7	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0002691_19	610130.Closa_0738	108.0	1.1e-28	N/A	N/A
UniRef90	UHGV-0002691_20	UniRef90_A0A1M6U056	87.8	1.45e-21	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0002691_20	1232447.BAHW02000027_gene1846	69.7	0.00000000000000301	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0002691_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0002691_20	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_22	phrog_119	82.5	5.8e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002691_22	UniRef90_G9YSB5	145.0	4.59626e-43	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0002691_22	926561.KB900623_gene763	102.0	7.51e-27	HNH nucleases	N/A
Pfam	UHGV-0002691_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0002691_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0002691_23	phrog_5110	84.1	1.1e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0002691_23	UniRef90_UPI00195E8788	84.0	1.36e-18	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0002691_23	1415774.U728_1256	55.5	0.0000000721	N/A	N/A
Pfam	UHGV-0002691_23	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0002691_23	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_24	phrog_9	228.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0002691_24	UniRef90_UPI0018737C02	852.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0002691_24	1235792.C808_00083	643.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0002691_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0002691_24	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0002691_24	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_25	phrog_12	113.1	1.7e-33	portal protein	head and packaging
UniRef90	UHGV-0002691_25	UniRef90_G9YSB8	449.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0002691_25	349161.Dred_2606	327.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0002691_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0002691_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0002691_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0002691_26	K01358	139.2	3.89995e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0002691_26	phrog_94	254.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0002691_26	UniRef90_A0A1C6FFN6	357.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0002691_26	349161.Dred_2605	281.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0002691_26	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0002691_26	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0002691_26	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_27	phrog_10	138.0	1.10001e-40	major head protein	head and packaging
UniRef90	UHGV-0002691_27	UniRef90_A0A328U7P3	616.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0002691_27	1235792.C808_00086	468.0	0	Phage capsid family	N/A
Pfam	UHGV-0002691_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0002691_27	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0002691_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0002691_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0002691_27	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_28	phrog_749	72.7	3.9e-21	N/A	unknown function
UniRef90	UHGV-0002691_28	UniRef90_A0A7V7BBS9	77.8	1.41e-16	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0002691_28	349161.Dred_2603	82.0	6.13e-19	N/A	N/A
PHROG	UHGV-0002691_29	phrog_19734	110.4	1.2e-32	N/A	unknown function
UniRef90	UHGV-0002691_29	UniRef90_A0A6I7GNS7	125.0	1.05e-34	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0002691_29	349161.Dred_2602	93.6	5.04e-23	N/A	N/A
structural_annotation	UHGV-0002691_29	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002691_30	1235798.C817_04588	86.7	1.09e-20	N/A	N/A
structural_annotation	UHGV-0002691_30	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_31	phrog_5	51.1	0.000000000000023	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0002691_31	908340.HMPREF9406_2573	120.0	1.11e-32	N/A	N/A
NCBIFam	UHGV-0002691_31	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0002691_31	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_32	phrog_88	109.8	2.3e-32	major tail protein	tail
UniRef90	UHGV-0002691_32	UniRef90_G9YSC5	238.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0002691_32	33035.JPJF01000039_gene278	112.0	4.11e-28	N/A	N/A
NCBIFam	UHGV-0002691_32	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0002691_32	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_34	phrog_2115	41.1	0.000000000033	tail protein	tail
eggNOG-mapper	UHGV-0002691_34	509191.AEDB02000020_gene3251	54.7	0.000000126	N/A	N/A
structural_annotation	UHGV-0002691_34	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_36	phrog_8263	72.7	1.1e-21	N/A	unknown function
UniRef90	UHGV-0002691_36	UniRef90_UPI001D063C90	110.0	1.79e-24	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0002691_36	1485543.JMME01000005_gene857	78.6	0.0000000000000363	N/A	N/A
KOfam	UHGV-0002691_37	K20283	68.3	1.5e-20	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0002691_37	phrog_1533	370.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0002691_37	UniRef90_R9L0T3	343.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0002691_37	1235793.C809_01928	343.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0002691_37	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0002691_37	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0002691_37	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0002691_38	phrog_33	102.1	8.5e-30	distal tail protein Dit	tail
UniRef90	UHGV-0002691_38	UniRef90_R5ADI0	323.0	0	Putative phage tail component	N/A
eggNOG-mapper	UHGV-0002691_38	545697.HMPREF0216_00910	169.0	0	tail component	N/A
COG	UHGV-0002691_38	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0002691_38	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002691_39	1410628.JNKS01000023_gene1753	273.0	0	N/A	N/A
structural_annotation	UHGV-0002691_39	PF20505	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002691_40	610130.Closa_1386	74.3	0.00000000000000962	N/A	N/A
UniRef90	UHGV-0002691_41	UniRef90_A5KNC2	67.8	0.0000000000000897	Prophage LambdaSa04, portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0002691_41	411460.RUMTOR_00469	89.0	2.63e-20	N/A	N/A
COG	UHGV-0002691_41	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
PHROG	UHGV-0002691_42	phrog_3639	57.1	1.3e-16	minor tail protein	tail
UniRef90	UHGV-0002691_42	UniRef90_A0A396NMY3	564.0	0	N/A	N/A
Pfam	UHGV-0002691_42	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0002691_42	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-0002691_42	PF10651,PF05475,NF033675,COG4935	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002691_43	UniRef90_R5ANH3	71.6	0.00000000000000951	Putative flagellar basal-body rod protein	N/A
PHROG	UHGV-0002691_44	phrog_2310	65.6	4.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0002691_44	1391647.AVSV01000022_gene2576	58.5	0.0000000000409	N/A	N/A
PHROG	UHGV-0002691_45	phrog_1067	270.6	0	minor head protein	head and packaging
UniRef90	UHGV-0002691_45	UniRef90_A0A396NSB6	719.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0002691_45	272562.CA_C0063	209.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0002691_45	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0002691_45	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0002691_45	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0002691_45	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0002691_46	phrog_937	54.0	0.0000000000000026	hemolysin	other
eggNOG-mapper	UHGV-0002691_46	1519439.JPJG01000023_gene533	64.7	0.00000000000248	N/A	N/A
PHROG	UHGV-0002691_48	phrog_13256	76.6	1.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0002691_48	1226322.HMPREF1545_00166	74.3	1.21e-16	N/A	N/A
KOfam	UHGV-0002691_49	K02395	84.0	3.1e-24	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0002691_49	phrog_3513	160.3	0	endolysin	lysis
UniRef90	UHGV-0002691_49	UniRef90_A0A396P8X6	399.0	0	LYZ2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0002691_49	1341157.RF007C_12385	167.0	0	mannosyl-glycoprotein	N/A
Pfam	UHGV-0002691_49	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0002691_49	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0002691_51	phrog_87	71.2	1e-20	metallo-protease	other
UniRef90	UHGV-0002691_51	UniRef90_UPI0018CD4D8C	154.0	7.00649e-45	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0002691_51	997296.PB1_16109	146.0	2.39062e-42	N/A	N/A
Pfam	UHGV-0002691_51	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0002691_51	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0002691_51	PF06114,MF_00745,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0002691_52	K22299	42.1	0.000000000019	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0002691_52	UniRef90_UPI001C390AB5	116.0	2.26e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0002691_52	997296.PB1_16114	108.0	4.88e-29	Protein conserved in bacteria	N/A
COG	UHGV-0002691_52	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002691_52	PF13560,MF_00535,NF041951,COG1513	N/A	N/A	N/A	N/A